| Definition | Chlorobium tepidum TLS, complete genome. |
|---|---|
| Accession | NC_002932 |
| Length | 2,154,946 |
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The map label for this gene is 21675009
Identifier: 21675009
GI number: 21675009
Start: 2070843
End: 2071493
Strand: Direct
Name: 21675009
Synonym: CT2200
Alternate gene names: NA
Gene position: 2070843-2071493 (Clockwise)
Preceding gene: 21675006
Following gene: 21675017
Centisome position: 96.1
GC content: 50.54
Gene sequence:
>651_bases ATGTGTTGTAAGCCCTTCAAAGGTCGAAAGAAAACGCCCACTCCATTACAGCCGCAATCTGCCAACAAAAAAAAGAGTAG CGTTGCTGCGCTTGTCTGCACTCACCAGAACTGTTCCATTTCACCCATCCATTACCTAACTTATGCGCTGCAACAACAAC GGCTATCAACCCATAAACCAATCACCATGCAGCGACTGCTCTCTTCAAGCCGGTACCTTGTAATCATCGCAGTTGCGGGA ACGTTTCTTGCCGCACTGACACTGCTTCTGTATGGGGGTATTTCGGTGGTTCAGCTTATTGCCGATACGGTCATGCACGC AGAAATTTCCGGTAAAACCGGCAAGATGCTCGTGCTCGGCTTCATTGAGAGCATCGATCTGTTCCTGCTAGGCACAGTCT TTTTCATCATCTCGCTGGGGCTGTACGAACTGTTCATCGACGATACACTCGAATTGCCACACTGGCTGGTCATTCATACC CTCGACGATCTGAAAAACAAGCTGATCGGCGTCATCGTCGTGGTGATGTCGGTCGTCTTTCTCGGCCATGTGGTGCAATG GCACGGTGAACAGGAACTGATCTGGCTTGGCGGGGCAATTGCGCTCGTCACCGCAGGACTGACCTATTTTGTCGGCAGCA AGAAAAAGTAG
Upstream 100 bases:
>100_bases ACGCAACCTTCTTGTGATGGTTGACGACAGCCTTCTTGCCAATCCAGTCCAGTGACGGCATTCGATAACTCCGTGAAAAA GCGTGGTGAGAAGTAACGTT
Downstream 100 bases:
>100_bases GTGCGGATGTGTTTGTGAATTTCAGTCCGGTCAGGTTTCCCCGCATCTGGCCGGGCCTGATAAACCATTCCTTCAGAACC ATTTCCTCGACCGGTAATAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 216; Mature: 216
Protein sequence:
>216_residues MCCKPFKGRKKTPTPLQPQSANKKKSSVAALVCTHQNCSISPIHYLTYALQQQRLSTHKPITMQRLLSSSRYLVIIAVAG TFLAALTLLLYGGISVVQLIADTVMHAEISGKTGKMLVLGFIESIDLFLLGTVFFIISLGLYELFIDDTLELPHWLVIHT LDDLKNKLIGVIVVVMSVVFLGHVVQWHGEQELIWLGGAIALVTAGLTYFVGSKKK
Sequences:
>Translated_216_residues MCCKPFKGRKKTPTPLQPQSANKKKSSVAALVCTHQNCSISPIHYLTYALQQQRLSTHKPITMQRLLSSSRYLVIIAVAG TFLAALTLLLYGGISVVQLIADTVMHAEISGKTGKMLVLGFIESIDLFLLGTVFFIISLGLYELFIDDTLELPHWLVIHT LDDLKNKLIGVIVVVMSVVFLGHVVQWHGEQELIWLGGAIALVTAGLTYFVGSKKK >Mature_216_residues MCCKPFKGRKKTPTPLQPQSANKKKSSVAALVCTHQNCSISPIHYLTYALQQQRLSTHKPITMQRLLSSSRYLVIIAVAG TFLAALTLLLYGGISVVQLIADTVMHAEISGKTGKMLVLGFIESIDLFLLGTVFFIISLGLYELFIDDTLELPHWLVIHT LDDLKNKLIGVIVVVMSVVFLGHVVQWHGEQELIWLGGAIALVTAGLTYFVGSKKK
Specific function: Unknown
COG id: COG2862
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23776; Mature: 23776
Theoretical pI: Translated: 9.61; Mature: 9.61
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MCCKPFKGRKKTPTPLQPQSANKKKSSVAALVCTHQNCSISPIHYLTYALQQQRLSTHKP CCCCCCCCCCCCCCCCCCCCCCCHHHHHEEEEEECCCCCCCHHHHHHHHHHHHHHHCCCC ITMQRLLSSSRYLVIIAVAGTFLAALTLLLYGGISVVQLIADTVMHAEISGKTGKMLVLG HHHHHHHCCCCEEEEEEHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHCCCCCCCCHHHH FIESIDLFLLGTVFFIISLGLYELFIDDTLELPHWLVIHTLDDLKNKLIGVIVVVMSVVF HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHEEEEHHHHHHHHHHHHHHHHHHHH LGHVVQWHGEQELIWLGGAIALVTAGLTYFVGSKKK HHHHHHHCCCCEEEEECHHHHHHHHHHHHHCCCCCC >Mature Secondary Structure MCCKPFKGRKKTPTPLQPQSANKKKSSVAALVCTHQNCSISPIHYLTYALQQQRLSTHKP CCCCCCCCCCCCCCCCCCCCCCCHHHHHEEEEEECCCCCCCHHHHHHHHHHHHHHHCCCC ITMQRLLSSSRYLVIIAVAGTFLAALTLLLYGGISVVQLIADTVMHAEISGKTGKMLVLG HHHHHHHCCCCEEEEEEHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHCCCCCCCCHHHH FIESIDLFLLGTVFFIISLGLYELFIDDTLELPHWLVIHTLDDLKNKLIGVIVVVMSVVF HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHEEEEHHHHHHHHHHHHHHHHHHHH LGHVVQWHGEQELIWLGGAIALVTAGLTYFVGSKKK HHHHHHHCCCCEEEEECHHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA