| Definition | Chlorobium tepidum TLS, complete genome. |
|---|---|
| Accession | NC_002932 |
| Length | 2,154,946 |
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The map label for this gene is bchB
Identifier: 21674960
GI number: 21674960
Start: 2038234
End: 2039847
Strand: Reverse
Name: bchB
Synonym: CT2151
Alternate gene names: 21674960
Gene position: 2039847-2038234 (Counterclockwise)
Preceding gene: 21674961
Following gene: 21674959
Centisome position: 94.66
GC content: 60.41
Gene sequence:
>1614_bases ATGCGTTTAGCTTTCTGGTTGTATGAAGGGACCGCGCTGCACGGTGTCAGCCGTGTGACCAACAGTATGAAAGGGGTCCA TACCGTTTACCATGCTCCGCAGGGTGACGATTATATTACGGCGACCTACACCATGCTCGAACGGACGCCCGAATTCCCGA AGCTTTCCATCAGCGTTGTTCGCGGCCAGGATCTGGCGCGCGGCACTTCGCGTCTGCCCGGCACGGTCGAGCAGGTTGAC AAGCACTACAAGCCGGAGCTGATCGTGGTAGCCCCGAGTTGCAGCACGGCGCTGCTCCAGGAGGACCTCGGCCAGATGGC TCGTGCTTCCGGCGTCGATCAAAGCAAGATCATGGTTTATGCGGTCAACCCGTTCCGCGTGGCTGAAAACGAGGCCGCCG AAGGACTCTTCACCGAACTGGTGAGGCGCTTCGCCGCCGAACAGCCGAAAACCGAAAAACCTTCGGTCAACCTGCTCGGC TTCACCTCCCTCGGTTTCCACCTACGCTCCAACCTTACCAGCTTGCGCCGGATGCTCAAGACGCTCGGCATCGAGGTGAA CGTGGTGGCTCCCTGGGGTGCAGGTATCGACGATCTGAAAAAGTTGCCCGCCGCGTGGGTCAACATCGCGCCGTTTCGTG AGATCGGTTGCCAAGCTGCCGGATACCTCAAGGAGAAATTCGGAATGCCCTCGATCACCGAAGCGCCGCTGGGCGTCAAC GCAACGCTGCGCTGGCTCCGGGCGATTATCGCCGAGGTGAACAAAATCGGTGCGGAGAAGGGCATGGCTCCGATGGCAAT GCCGGAGCTGCGCGACTTTTCGCTCGATGGCCAGAGCGCTCCGAGCAGCGTGCCGTGGTTCGCGCGTACGGCGGATATGG AGAGTTTCAGCAACAAGCGCGCGTTCGTGTTCGGCGACGCCACGCAGGTTGTGGGCGTTACCAAGTTCCTCAAGGACGAG CTCGGCATGAAGATCATCGGCGCGGGTACCTATTTGCCGAAGCAGGCGGATTGGGTGCGCGAGCAGCTCGAAGGCTACCT GCCGGGCGAGCTGATGGTGACCGACAAGTTTCAGGAGGTTTCGGCCTTCATCGAGGAAGAGATGCCGGAGCTGGTCTGCG GCACCCAGATGGAGCGGCACAGCTGCCGCAAGCTCGACGTGCCCTGCATGGTCATTTCGGCGCCCACCCATATCGAAAAC CACCTGCTCGGCTACTATCCGTTCTTCGGTTTCGATGGCGCGGATGTGATGGCCGACCGGGTTTACACATCGGCCAAGCT TGGTCTGGAGAAGCATCTGATCGACTTCTTCGGCGATGCCGGCCTCGAATACGAGGCGGAGGAGCCGGAAGCGTTCACCG AACCAACGATGTCGGGCAACGGCACGGTTGCCTCAGTTTCGTCCGCAGAGGCTCCGTCAGAAGCTGCGGTCGTGACCGCA ACGGCAACCGGCGAACTGAGCTGGACCGCTGAAGCCGAGAAAATGCTTGGCAAGGTGCCTTTTTTCGTGCGCAAGAAGGT GCGCAAGAATACCGACAACTACGCCCGCGAAATCGGCGAGCCTGTTGTCACGGCCGATGTGTTCCGCAAGGCGAAGGAGC ATCTCGGTGGATAA
Upstream 100 bases:
>100_bases CTGCGCCGCGAGAGCCTGCCGGAGTTCGACGAATCGGTGTGGCTCGAAGGGGTGATGCCCAGCGCTCAGTAACTTTCAAG ACGAAAACCAACGAACCAAC
Downstream 100 bases:
>100_bases CAGGAGAATCTGAAAAATCGATAAACCAATTGACCTCTATCATACCATGAGTTTAGTATTGGCCGTTTACGGAAAAGGCG GGATCGGCAAGAGCACGACC
Product: light-independent protochlorophyllide reductase subunit B
Products: NA
Alternate protein names: DPOR subunit B; LI-POR subunit B
Number of amino acids: Translated: 537; Mature: 537
Protein sequence:
>537_residues MRLAFWLYEGTALHGVSRVTNSMKGVHTVYHAPQGDDYITATYTMLERTPEFPKLSISVVRGQDLARGTSRLPGTVEQVD KHYKPELIVVAPSCSTALLQEDLGQMARASGVDQSKIMVYAVNPFRVAENEAAEGLFTELVRRFAAEQPKTEKPSVNLLG FTSLGFHLRSNLTSLRRMLKTLGIEVNVVAPWGAGIDDLKKLPAAWVNIAPFREIGCQAAGYLKEKFGMPSITEAPLGVN ATLRWLRAIIAEVNKIGAEKGMAPMAMPELRDFSLDGQSAPSSVPWFARTADMESFSNKRAFVFGDATQVVGVTKFLKDE LGMKIIGAGTYLPKQADWVREQLEGYLPGELMVTDKFQEVSAFIEEEMPELVCGTQMERHSCRKLDVPCMVISAPTHIEN HLLGYYPFFGFDGADVMADRVYTSAKLGLEKHLIDFFGDAGLEYEAEEPEAFTEPTMSGNGTVASVSSAEAPSEAAVVTA TATGELSWTAEAEKMLGKVPFFVRKKVRKNTDNYAREIGEPVVTADVFRKAKEHLGG
Sequences:
>Translated_537_residues MRLAFWLYEGTALHGVSRVTNSMKGVHTVYHAPQGDDYITATYTMLERTPEFPKLSISVVRGQDLARGTSRLPGTVEQVD KHYKPELIVVAPSCSTALLQEDLGQMARASGVDQSKIMVYAVNPFRVAENEAAEGLFTELVRRFAAEQPKTEKPSVNLLG FTSLGFHLRSNLTSLRRMLKTLGIEVNVVAPWGAGIDDLKKLPAAWVNIAPFREIGCQAAGYLKEKFGMPSITEAPLGVN ATLRWLRAIIAEVNKIGAEKGMAPMAMPELRDFSLDGQSAPSSVPWFARTADMESFSNKRAFVFGDATQVVGVTKFLKDE LGMKIIGAGTYLPKQADWVREQLEGYLPGELMVTDKFQEVSAFIEEEMPELVCGTQMERHSCRKLDVPCMVISAPTHIEN HLLGYYPFFGFDGADVMADRVYTSAKLGLEKHLIDFFGDAGLEYEAEEPEAFTEPTMSGNGTVASVSSAEAPSEAAVVTA TATGELSWTAEAEKMLGKVPFFVRKKVRKNTDNYAREIGEPVVTADVFRKAKEHLGG >Mature_537_residues MRLAFWLYEGTALHGVSRVTNSMKGVHTVYHAPQGDDYITATYTMLERTPEFPKLSISVVRGQDLARGTSRLPGTVEQVD KHYKPELIVVAPSCSTALLQEDLGQMARASGVDQSKIMVYAVNPFRVAENEAAEGLFTELVRRFAAEQPKTEKPSVNLLG FTSLGFHLRSNLTSLRRMLKTLGIEVNVVAPWGAGIDDLKKLPAAWVNIAPFREIGCQAAGYLKEKFGMPSITEAPLGVN ATLRWLRAIIAEVNKIGAEKGMAPMAMPELRDFSLDGQSAPSSVPWFARTADMESFSNKRAFVFGDATQVVGVTKFLKDE LGMKIIGAGTYLPKQADWVREQLEGYLPGELMVTDKFQEVSAFIEEEMPELVCGTQMERHSCRKLDVPCMVISAPTHIEN HLLGYYPFFGFDGADVMADRVYTSAKLGLEKHLIDFFGDAGLEYEAEEPEAFTEPTMSGNGTVASVSSAEAPSEAAVVTA TATGELSWTAEAEKMLGKVPFFVRKKVRKNTDNYAREIGEPVVTADVFRKAKEHLGG
Specific function: Uses Mg-ATP and reduced ferredoxin to reduce ring D of protochlorophyllide (Pchlide) to form chlorophyllide a (Chlide). This reaction is light-independent
COG id: COG2710
COG function: function code C; Nitrogenase molybdenum-iron protein, alpha and beta chains
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ChlB/BchB/BchZ family
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): BCHB_CHLTE (Q9F715)
Other databases:
- EMBL: AF287482 - EMBL: AE006470 - RefSeq: NP_663025.1 - PDB: 2KRU - PDBsum: 2KRU - ProteinModelPortal: Q9F715 - GeneID: 1007408 - GenomeReviews: AE006470_GR - KEGG: cte:CT2151 - NMPDR: fig|194439.1.peg.2119 - TIGR: CT2151 - HOGENOM: HBG284444 - OMA: TQMERHS - ProtClustDB: PRK02910 - BioCyc: CTEP194439:CT_2151-MONOMER - HAMAP: MF_00353 - InterPro: IPR000510 - InterPro: IPR013580 - InterPro: IPR005969 - InterPro: IPR016209 - PIRSF: PIRSF000163 - TIGRFAMs: TIGR01278
Pfam domain/function: PF00148 Oxidored_nitro; PF08369 PCP_red
EC number: 1.18.-.-
Molecular weight: Translated: 58969; Mature: 58969
Theoretical pI: Translated: 5.42; Mature: 5.42
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRLAFWLYEGTALHGVSRVTNSMKGVHTVYHAPQGDDYITATYTMLERTPEFPKLSISVV CEEEEEEECCCHHHHHHHHHHHHHHHHHEEECCCCCCEEEEEHHHHHCCCCCCCEEEEEE RGQDLARGTSRLPGTVEQVDKHYKPELIVVAPSCSTALLQEDLGQMARASGVDQSKIMVY CCCHHHCCCCCCCCHHHHHHHCCCCCEEEECCCCHHHHHHHHHHHHHHHCCCCCCEEEEE AVNPFRVAENEAAEGLFTELVRRFAAEQPKTEKPSVNLLGFTSLGFHLRSNLTSLRRMLK EECCEEECCCHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEHHHHHHHHHHHHHHHHHHH TLGIEVNVVAPWGAGIDDLKKLPAAWVNIAPFREIGCQAAGYLKEKFGMPSITEAPLGVN HHCCEEEEEECCCCCHHHHHHCCHHHHCCCCHHHHCCHHHHHHHHHCCCCCCCCCCCCCH ATLRWLRAIIAEVNKIGAEKGMAPMAMPELRDFSLDGQSAPSSVPWFARTADMESFSNKR HHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHCCCCCCCCCCCCCCCCEECCCHHHHCCCC AFVFGDATQVVGVTKFLKDELGMKIIGAGTYLPKQADWVREQLEGYLPGELMVTDKFQEV EEEEECHHHHHHHHHHHHHHCCCEEEECCCCCCCHHHHHHHHHCCCCCCCEEEECCHHHH SAFIEEEMPELVCGTQMERHSCRKLDVPCMVISAPTHIENHLLGYYPFFGFDGADVMADR HHHHHHHHHHHHHCCCHHHHCCCCCCCCEEEEECCCHHHHCCEEECCCCCCCCHHHHHHH VYTSAKLGLEKHLIDFFGDAGLEYEAEEPEAFTEPTMSGNGTVASVSSAEAPSEAAVVTA HHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHCCCCCCCCCCEEECCCCCCCCCCEEEEE TATGELSWTAEAEKMLGKVPFFVRKKVRKNTDNYAREIGEPVVTADVFRKAKEHLGG EECCCEEECHHHHHHHCCCCHHHHHHHHCCCHHHHHHHCCCHHHHHHHHHHHHHCCC >Mature Secondary Structure MRLAFWLYEGTALHGVSRVTNSMKGVHTVYHAPQGDDYITATYTMLERTPEFPKLSISVV CEEEEEEECCCHHHHHHHHHHHHHHHHHEEECCCCCCEEEEEHHHHHCCCCCCCEEEEEE RGQDLARGTSRLPGTVEQVDKHYKPELIVVAPSCSTALLQEDLGQMARASGVDQSKIMVY CCCHHHCCCCCCCCHHHHHHHCCCCCEEEECCCCHHHHHHHHHHHHHHHCCCCCCEEEEE AVNPFRVAENEAAEGLFTELVRRFAAEQPKTEKPSVNLLGFTSLGFHLRSNLTSLRRMLK EECCEEECCCHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEHHHHHHHHHHHHHHHHHHH TLGIEVNVVAPWGAGIDDLKKLPAAWVNIAPFREIGCQAAGYLKEKFGMPSITEAPLGVN HHCCEEEEEECCCCCHHHHHHCCHHHHCCCCHHHHCCHHHHHHHHHCCCCCCCCCCCCCH ATLRWLRAIIAEVNKIGAEKGMAPMAMPELRDFSLDGQSAPSSVPWFARTADMESFSNKR HHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHCCCCCCCCCCCCCCCCEECCCHHHHCCCC AFVFGDATQVVGVTKFLKDELGMKIIGAGTYLPKQADWVREQLEGYLPGELMVTDKFQEV EEEEECHHHHHHHHHHHHHHCCCEEEECCCCCCCHHHHHHHHHCCCCCCCEEEECCHHHH SAFIEEEMPELVCGTQMERHSCRKLDVPCMVISAPTHIENHLLGYYPFFGFDGADVMADR HHHHHHHHHHHHHCCCHHHHCCCCCCCCEEEEECCCHHHHCCEEECCCCCCCCHHHHHHH VYTSAKLGLEKHLIDFFGDAGLEYEAEEPEAFTEPTMSGNGTVASVSSAEAPSEAAVVTA HHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHCCCCCCCCCCEEECCCCCCCCCCEEEEE TATGELSWTAEAEKMLGKVPFFVRKKVRKNTDNYAREIGEPVVTADVFRKAKEHLGG EECCCEEECHHHHHHHCCCCHHHHHHHHCCCHHHHHHHCCCHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 10976061; 12093901