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The map label for this gene is rfaF [H]

Identifier: 21674946

GI number: 21674946

Start: 2021084

End: 2022112

Strand: Reverse

Name: rfaF [H]

Synonym: CT2137

Alternate gene names: 21674946

Gene position: 2022112-2021084 (Counterclockwise)

Preceding gene: 21674947

Following gene: 21674945

Centisome position: 93.84

GC content: 60.74

Gene sequence:

>1029_bases
GTGGTGGGAGTTCTGGTCGTGACGGCACCGGATACTGTCCGCACCATCCTTGTCGTGCGCCTCAGCGCCATCGGCGACAT
CGTGCTGACCACCCCCGTGCTTGCCGAGCTGCACAAAGCTTTGCCGCAGGCGCGGATCGACTATTGCACCAAAGCGCCTT
TCGTGCCGCTCGTTGCGTCGAATCCTGCTGTGGCTTCCGTTGTGACGCCGGAGTCGCTTGCTGCCGGATCGGCTTATGAT
CTGGTGCTCGATCTTCAAAACAACCGCCGCTCGCGTGCCTTTGTCCAGAAACTCCGGGCAGGCAAGGTTACGCGCTACCA
CAAACGTAACTGGAAAAAGCTGTTGCTGGTGCAGTTCAAGATCAACGTTTCGGCTGGCTATTACTCTGTCGTCGAGCGTT
ACGGCGAGGCGCTCGATGGTCTTGTGCCGAAAATTACTGCTCCGTGCGCCCTCTATCCGTCGCTGGAGGAGCGTGCGTTC
GCCGCCGAAGCGCTCGGCGCTGATGGCCCTGTGCTGGCGGTCTGCTTTGGGGCGAACCACTTCACAAAGCGCTATCCGCT
CGAACGTTTCGCCCGGATCATCGAGCTGGTCACATCCCAAACTCCGGCGCGCGTTCTGCTGCTCGGCGGCAAGGAGGACG
AGCCGGAGGCCGCGAAGCTTATCGCGATGCTTCCCGAAGCGGCGCGAAGCCGCGTGCTGTCGCTCGCTGGAAAGGCAACG
CTCATGCAATCGGCGGCGCTGCTCTCCGGAGTCGATGCGGTGCTTACCAACGACACCGGCCTGATGCACATCGCTTCGGC
ATTCGGCAAAAAGCTCTTCGTCATTTTCGGCTCGTCGGTCAAGGAGTTCGGTTTCATGCCGTGGGGGGTGGAGTACGAGC
TGTTCGAGACGTCGGGTCTCAAATGCCGCCCATGCTCGCACATTGGCCGCGCAGCCTGCCCGAAAGGGCACTTCCGCTGC
ATGACCGAAATCGGGCCGGAACGCATCGCGAATCGCATCGTTGAAACGCTCAATGAGAAATCATCATGA

Upstream 100 bases:

>100_bases
AGGGCGAAACGCCGGGCAAGGAGCGGATGATGGAGGTTGCTATCGACCGAATCGCTCAACTCGGCGCGTCGAACCAGCAG
AAAAAACCGGGCTACAAGGC

Downstream 100 bases:

>100_bases
ATATTTTTACCTGGAACATCAACGGCATCCGCGCCCGAAAGGAGGCGCTTGCCGCGTGGCTCGACAGCCGTAAGCCGGAC
ATCGTCGTGCTCGAAGAGAT

Product: heptosyltransferase

Products: NA

Alternate protein names: ADP-heptose--LPS heptosyltransferase II [H]

Number of amino acids: Translated: 342; Mature: 342

Protein sequence:

>342_residues
MVGVLVVTAPDTVRTILVVRLSAIGDIVLTTPVLAELHKALPQARIDYCTKAPFVPLVASNPAVASVVTPESLAAGSAYD
LVLDLQNNRRSRAFVQKLRAGKVTRYHKRNWKKLLLVQFKINVSAGYYSVVERYGEALDGLVPKITAPCALYPSLEERAF
AAEALGADGPVLAVCFGANHFTKRYPLERFARIIELVTSQTPARVLLLGGKEDEPEAAKLIAMLPEAARSRVLSLAGKAT
LMQSAALLSGVDAVLTNDTGLMHIASAFGKKLFVIFGSSVKEFGFMPWGVEYELFETSGLKCRPCSHIGRAACPKGHFRC
MTEIGPERIANRIVETLNEKSS

Sequences:

>Translated_342_residues
MVGVLVVTAPDTVRTILVVRLSAIGDIVLTTPVLAELHKALPQARIDYCTKAPFVPLVASNPAVASVVTPESLAAGSAYD
LVLDLQNNRRSRAFVQKLRAGKVTRYHKRNWKKLLLVQFKINVSAGYYSVVERYGEALDGLVPKITAPCALYPSLEERAF
AAEALGADGPVLAVCFGANHFTKRYPLERFARIIELVTSQTPARVLLLGGKEDEPEAAKLIAMLPEAARSRVLSLAGKAT
LMQSAALLSGVDAVLTNDTGLMHIASAFGKKLFVIFGSSVKEFGFMPWGVEYELFETSGLKCRPCSHIGRAACPKGHFRC
MTEIGPERIANRIVETLNEKSS
>Mature_342_residues
MVGVLVVTAPDTVRTILVVRLSAIGDIVLTTPVLAELHKALPQARIDYCTKAPFVPLVASNPAVASVVTPESLAAGSAYD
LVLDLQNNRRSRAFVQKLRAGKVTRYHKRNWKKLLLVQFKINVSAGYYSVVERYGEALDGLVPKITAPCALYPSLEERAF
AAEALGADGPVLAVCFGANHFTKRYPLERFARIIELVTSQTPARVLLLGGKEDEPEAAKLIAMLPEAARSRVLSLAGKAT
LMQSAALLSGVDAVLTNDTGLMHIASAFGKKLFVIFGSSVKEFGFMPWGVEYELFETSGLKCRPCSHIGRAACPKGHFRC
MTEIGPERIANRIVETLNEKSS

Specific function: Lipopolysaccharide core biosynthesis. [C]

COG id: COG0859

COG function: function code M; ADP-heptose:LPS heptosyltransferase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyltransferase 9 family [H]

Homologues:

Organism=Escherichia coli, GI1790050, Length=293, Percent_Identity=25.5972696245734, Blast_Score=86, Evalue=4e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002201
- InterPro:   IPR011910 [H]

Pfam domain/function: PF01075 Glyco_transf_9 [H]

EC number: 2.-.-.- [C]

Molecular weight: Translated: 37068; Mature: 37068

Theoretical pI: Translated: 9.50; Mature: 9.50

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVGVLVVTAPDTVRTILVVRLSAIGDIVLTTPVLAELHKALPQARIDYCTKAPFVPLVAS
CEEEEEEECCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCHHHHHHHCCCCCCEEEEC
NPAVASVVTPESLAAGSAYDLVLDLQNNRRSRAFVQKLRAGKVTRYHKRNWKKLLLVQFK
CCCEEEEECCHHHCCCCEEEEEEEECCCCHHHHHHHHHHHCCCHHHHHCCCEEEEEEEEE
INVSAGYYSVVERYGEALDGLVPKITAPCALYPSLEERAFAAEALGADGPVLAVCFGANH
EEECCHHHHHHHHHHHHHHCCCCHHCCCEEECCCHHHHHHHHHHCCCCCCEEEEEECCCH
FTKRYPLERFARIIELVTSQTPARVLLLGGKEDEPEAAKLIAMLPEAARSRVLSLAGKAT
HHHCCCHHHHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
LMQSAALLSGVDAVLTNDTGLMHIASAFGKKLFVIFGSSVKEFGFMPWGVEYELFETSGL
HHHHHHHHHCCHHEEECCCCHHHHHHHHCCEEEEEECCCHHHHCCCCCCCEEEEEECCCC
KCRPCSHIGRAACPKGHFRCMTEIGPERIANRIVETLNEKSS
CCCCHHHCCCCCCCCCHHEEHHHCCHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MVGVLVVTAPDTVRTILVVRLSAIGDIVLTTPVLAELHKALPQARIDYCTKAPFVPLVAS
CEEEEEEECCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCHHHHHHHCCCCCCEEEEC
NPAVASVVTPESLAAGSAYDLVLDLQNNRRSRAFVQKLRAGKVTRYHKRNWKKLLLVQFK
CCCEEEEECCHHHCCCCEEEEEEEECCCCHHHHHHHHHHHCCCHHHHHCCCEEEEEEEEE
INVSAGYYSVVERYGEALDGLVPKITAPCALYPSLEERAFAAEALGADGPVLAVCFGANH
EEECCHHHHHHHHHHHHHHCCCCHHCCCEEECCCHHHHHHHHHHCCCCCCEEEEEECCCH
FTKRYPLERFARIIELVTSQTPARVLLLGGKEDEPEAAKLIAMLPEAARSRVLSLAGKAT
HHHCCCHHHHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
LMQSAALLSGVDAVLTNDTGLMHIASAFGKKLFVIFGSSVKEFGFMPWGVEYELFETSGL
HHHHHHHHHCCHHEEECCCCHHHHHHHHCCEEEEEECCCHHHHCCCCCCCEEEEEECCCC
KCRPCSHIGRAACPKGHFRCMTEIGPERIANRIVETLNEKSS
CCCCHHHCCCCCCCCCHHEEHHHCCHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]