| Definition | Chlorobium tepidum TLS, complete genome. |
|---|---|
| Accession | NC_002932 |
| Length | 2,154,946 |
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The map label for this gene is rrmA [C]
Identifier: 21674930
GI number: 21674930
Start: 2006555
End: 2007280
Strand: Direct
Name: rrmA [C]
Synonym: CT2121
Alternate gene names: 21674930
Gene position: 2006555-2007280 (Clockwise)
Preceding gene: 21674929
Following gene: 21674932
Centisome position: 93.11
GC content: 56.75
Gene sequence:
>726_bases GTGCCCATGTCATTCTATTCGAAATTCTCGGAATACTACGAGCGGGTCTTTCCGTTCAGGGAGGATGTCTGGCAATTTCT GAAAAGATATGCCGGAAGTCCCGGCAATGCGCTGCTCGACGTGGGATGCGGGCCGGGGCACTACTGTGGACGGTTTGCCA GCGATGGCTTCAACGCACTTGGCATCGACCTCGACGAAGCAATGATCGACGAAGCACAGCGCCGCTATCCCGAAGCTGCA TTCCGCTGCCTCGACATGCGGCGGCTGGAGAAGACTGAGGGGCGATTCGACTGCGTCTGGTCAATCGGCAACGTCCTGGC CCACCTCCCCACCGAAGCACTCGCCCCGTTCATCTCGAAAATCCACAATCTGCTCAAACCGGGCGGCTACTGGATCATGC AGGTGATGAACTGGGACACCCTCGCAGAATTGACGAACTACGACTTCCCGGTGCGCACCATCGAAGCCAACGGTTCAACC GCCACCTTCCACCGCCACTATTCATCGATCACGCCTGAGTCGTTGCAGTTCACCTTTTCGCTCAAGGATGAAGATTCGGT GCTATTTGAAGAATCGGTAACGCTCTATCCGGTCGCGATTGAGCGCTACCTGAAGCTGCACGAGGATGCCGGATTTCTGT ACGAAGGAATGTACTCGGATTTCAGTGGATCGGCGTTAAGGAGTGTGCCCGGCACAGGTTTGGCGCTGGTGTTTGGGCGG GGGTGA
Upstream 100 bases:
>100_bases ATCGAAAAAGCGATCCGGTTGATCCGGGGAAAGGATATCAACCGTTAACGGCGTTTTCGGGCAAAAACCGCTGGCTCCCT GCGCCAGCAACACAACAATC
Downstream 100 bases:
>100_bases GGAGAGAATCTTCGGAAAAGCTTTTTTTAAAGACAATTACGAGAGAATACTTTCCCATATCTTGCCGGGATCATTGATCG AAATACTCCGTCCGGCTTTA
Product: methyltransferase, putative
Products: S-adenosyl-L-homocysteine +rRNA containing Nmethylguanine [C]
Alternate protein names: Methyltransferase; SAM-Dependent Methyltransferase; Menaquinone Biosynthesis Methyltransferase
Number of amino acids: Translated: 241; Mature: 240
Protein sequence:
>241_residues MPMSFYSKFSEYYERVFPFREDVWQFLKRYAGSPGNALLDVGCGPGHYCGRFASDGFNALGIDLDEAMIDEAQRRYPEAA FRCLDMRRLEKTEGRFDCVWSIGNVLAHLPTEALAPFISKIHNLLKPGGYWIMQVMNWDTLAELTNYDFPVRTIEANGST ATFHRHYSSITPESLQFTFSLKDEDSVLFEESVTLYPVAIERYLKLHEDAGFLYEGMYSDFSGSALRSVPGTGLALVFGR G
Sequences:
>Translated_241_residues MPMSFYSKFSEYYERVFPFREDVWQFLKRYAGSPGNALLDVGCGPGHYCGRFASDGFNALGIDLDEAMIDEAQRRYPEAA FRCLDMRRLEKTEGRFDCVWSIGNVLAHLPTEALAPFISKIHNLLKPGGYWIMQVMNWDTLAELTNYDFPVRTIEANGST ATFHRHYSSITPESLQFTFSLKDEDSVLFEESVTLYPVAIERYLKLHEDAGFLYEGMYSDFSGSALRSVPGTGLALVFGR G >Mature_240_residues PMSFYSKFSEYYERVFPFREDVWQFLKRYAGSPGNALLDVGCGPGHYCGRFASDGFNALGIDLDEAMIDEAQRRYPEAAF RCLDMRRLEKTEGRFDCVWSIGNVLAHLPTEALAPFISKIHNLLKPGGYWIMQVMNWDTLAELTNYDFPVRTIEANGSTA TFHRHYSSITPESLQFTFSLKDEDSVLFEESVTLYPVAIERYLKLHEDAGFLYEGMYSDFSGSALRSVPGTGLALVFGRG
Specific function: Specifically Methylates The Guanosine In Position 745 Of 23s rRNA. [C]
COG id: COG0500
COG function: function code QR; SAM-dependent methyltransferases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: 2.1.1.51 [C]
Molecular weight: Translated: 27363; Mature: 27232
Theoretical pI: Translated: 4.86; Mature: 4.86
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPMSFYSKFSEYYERVFPFREDVWQFLKRYAGSPGNALLDVGCGPGHYCGRFASDGFNAL CCCHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCEEEECCCCCCHHHHHHHCCCCCEE GIDLDEAMIDEAQRRYPEAAFRCLDMRRLEKTEGRFDCVWSIGNVLAHLPTEALAPFISK CCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHCCCCEEHHHHHHHHHHHCCHHHHHHHHHH IHNLLKPGGYWIMQVMNWDTLAELTNYDFPVRTIEANGSTATFHRHYSSITPESLQFTFS HHHHHCCCCCEEEEHHCHHHHHHHHCCCCCEEEEECCCCEEHHHHHHCCCCCCCEEEEEE LKDEDSVLFEESVTLYPVAIERYLKLHEDAGFLYEGMYSDFSGSALRSVPGTGLALVFGR ECCCCCEEECCCCEEHHHHHHHHHHHHCCCCHHHHHHHCCCCCCHHHCCCCCCEEEEEEC G C >Mature Secondary Structure PMSFYSKFSEYYERVFPFREDVWQFLKRYAGSPGNALLDVGCGPGHYCGRFASDGFNAL CCHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCEEEECCCCCCHHHHHHHCCCCCEE GIDLDEAMIDEAQRRYPEAAFRCLDMRRLEKTEGRFDCVWSIGNVLAHLPTEALAPFISK CCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHCCCCEEHHHHHHHHHHHCCHHHHHHHHHH IHNLLKPGGYWIMQVMNWDTLAELTNYDFPVRTIEANGSTATFHRHYSSITPESLQFTFS HHHHHCCCCCEEEEHHCHHHHHHHHCCCCCEEEEECCCCEEHHHHHHCCCCCCCEEEEEE LKDEDSVLFEESVTLYPVAIERYLKLHEDAGFLYEGMYSDFSGSALRSVPGTGLALVFGR ECCCCCEEECCCCEEHHHHHHHHHHHHCCCCHHHHHHHCCCCCCHHHCCCCCCEEEEEEC G C
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: Unidentified protein factor B [C]
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: S-Adenosyl-L-methionine; rRNA [C]
Specific reaction: S-Adenosyl-L-methionine + rRNA = S-adenosyl-L-homocysteine +rRNA containing Nmethylguanine [C]
General reaction: Methyl group transfer [C]
Inhibitor: Mg2+; Unidentified protein factor A1 [C]
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA