| Definition | Chlorobium tepidum TLS, complete genome. |
|---|---|
| Accession | NC_002932 |
| Length | 2,154,946 |
Click here to switch to the map view.
The map label for this gene is wecB [H]
Identifier: 21674904
GI number: 21674904
Start: 1986924
End: 1987991
Strand: Reverse
Name: wecB [H]
Synonym: CT2095
Alternate gene names: 21674904
Gene position: 1987991-1986924 (Counterclockwise)
Preceding gene: 21674906
Following gene: 21674902
Centisome position: 92.25
GC content: 60.11
Gene sequence:
>1068_bases GTGTCCTCTGTGAAAAAAATAGTCTTGATTGCCCAGGATCGTGCGGCGTTTCTCCATGTCGCTCCGCTTGTCAGCGTTTT CAGAAAAAATGGTGTTTTCGAGTCCGTGCTTGTCCGGGTACTGACTCCTGGCAACCGCGCCGAACACGACGCGCTTGCCG CTGCATTCGGCTTGTCGGATGAACTCCGCACCATCGAACTGGAGCCATGCACGCCGGTTGCCGAGACCGCTTCGCTTATG CTTGCGTTAGAGCGGGTGCTCAGTGAACTTGAACCAGCCTTTGTTGTGCCCGGCGGCCACGACAGCGCCAGCCTTGCCGG TGCGTTTGCCGCCGCGAAAATGGGCATCCCGGTGGTCAGCCTCGACGCAGGCCTGCGCAGTTACGACCGCGCCGAACCCG AAGAGATCAGCCGCCTCGTCATCGACTCGGTCGCCGCGCTTCACTTCGTCAGCGAGCACAGCGGCATCTACAACCTCATG AACGAAGGCGTCGCCGATGAGCGCATCCTTTTCGTTGGCAACACGGCCATCGACAGCCTTGTGACGCTGATGGCGCAGGC TAACCAATCCGGTGTGCTCGAAACGCTCTCGCTTGCCCCGAAAAAGTTCGTCACCGTTCTGCTCAAGCCGGAGCCCTTCG GAAATCGCGACCTGCTCTGCAAGGTGCTCGAATCGCTTGCCGCCACATCGACCGTGCTGCTTCCGGGCAGTCAGTCGCCC GAAGATGCGCTCGTTGGCGTTTCGGGGCTCCGGATGATCGATATGCCGGGCTACATCGACCTCCTGCGCCTGCTCAAGGA GTCGGCGCTCGTACTTACCGACAGCGCCGAGTTCGAGGCTGAACTGACTGTGATGAACGTGCCCTGCATCACCCTGCGTC AGAGCACCGCCCGCCCCTCGACCGTCGAACTCGGTACCAACGTGCTGATTGATCCCGATGAAGCGGAGATTCTCGAACGT GCCACGGCCATCCTCTCCGGCAAACAGTTGAAAAAGACGTTGATTCCCGAGAAATGGGACGGCGCGGCATCAAAGCGCAT AGCCGAAGTGCTCGAACGAGGAGCGTAA
Upstream 100 bases:
>100_bases ACCATGCGGCTATTGCGATCGATCGTCTTGTTGTCATGCGGCTGGTTCGGGTTTGCTCCGAAGGTTATCGTTCAATTTAT CAATGTAATAAAGCTTTCCG
Downstream 100 bases:
>100_bases AGGGCATCAGTTCGGTTTCTCTTGTGTCAAGTCACTGTTGCAACAACCCGGCTCAGTATTCCTTCCTGCCGAACAGCTCC GGATCGACGCTGGTGCCGTA
Product: UDP-N-acetylglucosamine 2-epimerase, putative
Products: NA
Alternate protein names: UDP-GlcNAc-2-epimerase [H]
Number of amino acids: Translated: 355; Mature: 354
Protein sequence:
>355_residues MSSVKKIVLIAQDRAAFLHVAPLVSVFRKNGVFESVLVRVLTPGNRAEHDALAAAFGLSDELRTIELEPCTPVAETASLM LALERVLSELEPAFVVPGGHDSASLAGAFAAAKMGIPVVSLDAGLRSYDRAEPEEISRLVIDSVAALHFVSEHSGIYNLM NEGVADERILFVGNTAIDSLVTLMAQANQSGVLETLSLAPKKFVTVLLKPEPFGNRDLLCKVLESLAATSTVLLPGSQSP EDALVGVSGLRMIDMPGYIDLLRLLKESALVLTDSAEFEAELTVMNVPCITLRQSTARPSTVELGTNVLIDPDEAEILER ATAILSGKQLKKTLIPEKWDGAASKRIAEVLERGA
Sequences:
>Translated_355_residues MSSVKKIVLIAQDRAAFLHVAPLVSVFRKNGVFESVLVRVLTPGNRAEHDALAAAFGLSDELRTIELEPCTPVAETASLM LALERVLSELEPAFVVPGGHDSASLAGAFAAAKMGIPVVSLDAGLRSYDRAEPEEISRLVIDSVAALHFVSEHSGIYNLM NEGVADERILFVGNTAIDSLVTLMAQANQSGVLETLSLAPKKFVTVLLKPEPFGNRDLLCKVLESLAATSTVLLPGSQSP EDALVGVSGLRMIDMPGYIDLLRLLKESALVLTDSAEFEAELTVMNVPCITLRQSTARPSTVELGTNVLIDPDEAEILER ATAILSGKQLKKTLIPEKWDGAASKRIAEVLERGA >Mature_354_residues SSVKKIVLIAQDRAAFLHVAPLVSVFRKNGVFESVLVRVLTPGNRAEHDALAAAFGLSDELRTIELEPCTPVAETASLML ALERVLSELEPAFVVPGGHDSASLAGAFAAAKMGIPVVSLDAGLRSYDRAEPEEISRLVIDSVAALHFVSEHSGIYNLMN EGVADERILFVGNTAIDSLVTLMAQANQSGVLETLSLAPKKFVTVLLKPEPFGNRDLLCKVLESLAATSTVLLPGSQSPE DALVGVSGLRMIDMPGYIDLLRLLKESALVLTDSAEFEAELTVMNVPCITLRQSTARPSTVELGTNVLIDPDEAEILERA TAILSGKQLKKTLIPEKWDGAASKRIAEVLERGA
Specific function: Catalyzes the reversible epimerization at C-2 of UDP-N- acetylglucosamine (UDP-GlcNAc) to produce UDP-N-acetylmannosamine (UDP-ManNAc), the activated donor of ManNAc residues [H]
COG id: COG0381
COG function: function code M; UDP-N-acetylglucosamine 2-epimerase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UDP-N-acetylglucosamine 2-epimerase family [H]
Homologues:
Organism=Escherichia coli, GI48994967, Length=372, Percent_Identity=28.2258064516129, Blast_Score=111, Evalue=5e-26,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003331 [H]
Pfam domain/function: PF02350 Epimerase_2 [H]
EC number: =5.1.3.14 [H]
Molecular weight: Translated: 37931; Mature: 37800
Theoretical pI: Translated: 4.60; Mature: 4.60
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSSVKKIVLIAQDRAAFLHVAPLVSVFRKNGVFESVLVRVLTPGNRAEHDALAAAFGLSD CCCCCEEEEEECCCHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCHHHHHHHHHCCCC ELRTIELEPCTPVAETASLMLALERVLSELEPAFVVPGGHDSASLAGAFAAAKMGIPVVS CCEEEEECCCCCHHHHHHHHHHHHHHHHHCCCCEEECCCCCCHHHHHHHHHHHHCCCEEE LDAGLRSYDRAEPEEISRLVIDSVAALHFVSEHSGIYNLMNEGVADERILFVGNTAIDSL ECCCHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCCEEEEEECHHHHHH VTLMAQANQSGVLETLSLAPKKFVTVLLKPEPFGNRDLLCKVLESLAATSTVLLPGSQSP HHHHHHCCCCCHHHHHHHCCCHHEEEEECCCCCCCHHHHHHHHHHHHHCCEEEECCCCCC EDALVGVSGLRMIDMPGYIDLLRLLKESALVLTDSAEFEAELTVMNVPCITLRQSTARPS HHHHCCCCCCEEECCCCHHHHHHHHHHCCEEEECCCCCEEEEEEEECCEEEEECCCCCCC TVELGTNVLIDPDEAEILERATAILSGKQLKKTLIPEKWDGAASKRIAEVLERGA EEECCCCEEECCCHHHHHHHHHHHHCCHHHHHHHCCCCCCCHHHHHHHHHHHCCC >Mature Secondary Structure SSVKKIVLIAQDRAAFLHVAPLVSVFRKNGVFESVLVRVLTPGNRAEHDALAAAFGLSD CCCCEEEEEECCCHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCHHHHHHHHHCCCC ELRTIELEPCTPVAETASLMLALERVLSELEPAFVVPGGHDSASLAGAFAAAKMGIPVVS CCEEEEECCCCCHHHHHHHHHHHHHHHHHCCCCEEECCCCCCHHHHHHHHHHHHCCCEEE LDAGLRSYDRAEPEEISRLVIDSVAALHFVSEHSGIYNLMNEGVADERILFVGNTAIDSL ECCCHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCCEEEEEECHHHHHH VTLMAQANQSGVLETLSLAPKKFVTVLLKPEPFGNRDLLCKVLESLAATSTVLLPGSQSP HHHHHHCCCCCHHHHHHHCCCHHEEEEECCCCCCCHHHHHHHHHHHHHCCEEEECCCCCC EDALVGVSGLRMIDMPGYIDLLRLLKESALVLTDSAEFEAELTVMNVPCITLRQSTARPS HHHHCCCCCCEEECCCCHHHHHHHHHHCCEEEECCCCCEEEEEEEECCEEEEECCCCCCC TVELGTNVLIDPDEAEILERATAILSGKQLKKTLIPEKWDGAASKRIAEVLERGA EEECCCCEEECCCHHHHHHHHHHHHCCHHHHHHHCCCCCCCHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA