| Definition | Chlorobium tepidum TLS, complete genome. |
|---|---|
| Accession | NC_002932 |
| Length | 2,154,946 |
Click here to switch to the map view.
The map label for this gene is 21674901
Identifier: 21674901
GI number: 21674901
Start: 1985144
End: 1985971
Strand: Direct
Name: 21674901
Synonym: CT2092
Alternate gene names: NA
Gene position: 1985144-1985971 (Clockwise)
Preceding gene: 21674896
Following gene: 21674903
Centisome position: 92.12
GC content: 58.57
Gene sequence:
>828_bases ATGAGCGAGACAAAACACGACACGCTCCGGTTCGGCATCGTCACCGACATTCACTACAACCCCGAAAGCAAGACCGGCAA CCAGACGCAAGCCGGTCTCGAACGATGCATTGAGCACTGGACGCGCGAGGGCGCGGAGTTTGTCATCCAGCTCGGCGACC TCATCAGCCGCGAAGGCCCCGAAGCCGAGTCGGATTTGATTGCCGTGCGCGACATGCTCGCCCGTTTCCCCGGTAAGGTT TATCACGTCGCAGGCAACCACTGCCTGGCCGTGCCGCCCGAACGTTACAAAACGATCATGGGGCTCGACAGCCTCTACTA CACCTTCAGCTCGCACGGCATCCGCTTTATCGTGCTCAACGGCATGGATGTCTCAGCCGTCAACGATCCCCAAACTAAAG CCGACCGCCATCTGCTCGAATACTACCGCGACAATGTCAAAGCCCCCTTCTACTGCGGCGCCATCGGCGCGCGCCAGCTC GAATGGCTCGTGAACGAACTCGACCTTGCGCTGAAAAACGAGGAACCCGTCATCATCCTCAGCCATTTACCGCTTCTCGA AGAGACCACCGACGAAAAACACGGCCTGTTGTGGAACCACGAAGAGCTCACCGCTATCCTGTTCCGCTACCCGAACATCC GCGCCTGCCTCAGCGGTCACTACCACTCTGCTGCCCATGCCCGCAGTGATGGCATCCACTTCATCGTTCTTCCAGCTTTT GCAGGATGGCCGCCGGGGGAATGCTGTCTGACCGTAAAGATCACCGGAGAGAACATCAACATCGGCAGACAAGACGCTCC TCCCCTCTTCGACATTCCTCTTCCCTGA
Upstream 100 bases:
>100_bases CCAACTACGAGCGCTTCGACGTCGAAAACGTGCTCGACGGCGACATCGACGACTACATCCAGCGCTACCTCTCCGAATTC GGCGACTGAGCAACGAAGCG
Downstream 100 bases:
>100_bases CCGGTTGCGACCGGGCGACTGCGAAACTATGGGAAATTATCAGAAATGGCAGGGCATTGTTCGGCAAGAGATGCCGGAAA CTCCCCCCAGAACTTCCCGC
Product: hypothetical protein
Products: NA
Alternate protein names: Twin-Arginine Translocation Pathway Signal; Calcineurin-Like Phosphoesterase; Phosphatase Protein; Alkaline Phosphatase PhoA
Number of amino acids: Translated: 275; Mature: 274
Protein sequence:
>275_residues MSETKHDTLRFGIVTDIHYNPESKTGNQTQAGLERCIEHWTREGAEFVIQLGDLISREGPEAESDLIAVRDMLARFPGKV YHVAGNHCLAVPPERYKTIMGLDSLYYTFSSHGIRFIVLNGMDVSAVNDPQTKADRHLLEYYRDNVKAPFYCGAIGARQL EWLVNELDLALKNEEPVIILSHLPLLEETTDEKHGLLWNHEELTAILFRYPNIRACLSGHYHSAAHARSDGIHFIVLPAF AGWPPGECCLTVKITGENINIGRQDAPPLFDIPLP
Sequences:
>Translated_275_residues MSETKHDTLRFGIVTDIHYNPESKTGNQTQAGLERCIEHWTREGAEFVIQLGDLISREGPEAESDLIAVRDMLARFPGKV YHVAGNHCLAVPPERYKTIMGLDSLYYTFSSHGIRFIVLNGMDVSAVNDPQTKADRHLLEYYRDNVKAPFYCGAIGARQL EWLVNELDLALKNEEPVIILSHLPLLEETTDEKHGLLWNHEELTAILFRYPNIRACLSGHYHSAAHARSDGIHFIVLPAF AGWPPGECCLTVKITGENINIGRQDAPPLFDIPLP >Mature_274_residues SETKHDTLRFGIVTDIHYNPESKTGNQTQAGLERCIEHWTREGAEFVIQLGDLISREGPEAESDLIAVRDMLARFPGKVY HVAGNHCLAVPPERYKTIMGLDSLYYTFSSHGIRFIVLNGMDVSAVNDPQTKADRHLLEYYRDNVKAPFYCGAIGARQLE WLVNELDLALKNEEPVIILSHLPLLEETTDEKHGLLWNHEELTAILFRYPNIRACLSGHYHSAAHARSDGIHFIVLPAFA GWPPGECCLTVKITGENINIGRQDAPPLFDIPLP
Specific function: Unknown
COG id: COG1409
COG function: function code R; Predicted phosphohydrolases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI94158594, Length=278, Percent_Identity=22.6618705035971, Blast_Score=67, Evalue=2e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30923; Mature: 30791
Theoretical pI: Translated: 5.67; Mature: 5.67
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSETKHDTLRFGIVTDIHYNPESKTGNQTQAGLERCIEHWTREGAEFVIQLGDLISREGP CCCCCCCEEEEEEEEEEEECCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCC EAESDLIAVRDMLARFPGKVYHVAGNHCLAVPPERYKTIMGLDSLYYTFSSHGIRFIVLN CCHHHHHHHHHHHHHCCCEEEEEECCCEEECCHHHHHHHHHHHHHHHHHCCCCEEEEEEE GMDVSAVNDPQTKADRHLLEYYRDNVKAPFYCGAIGARQLEWLVNELDLALKNEEPVIIL CCEEECCCCCHHHHHHHHHHHHHHCCCCCEEECCCCHHHHHHHHHHHHHEECCCCCEEEE SHLPLLEETTDEKHGLLWNHEELTAILFRYPNIRACLSGHYHSAAHARSDGIHFIVLPAF ECCCCHHHCCCCCCCEEECHHHHHHHEHCCCCHHHHHCCCCCCHHHCCCCCEEEEEEECC AGWPPGECCLTVKITGENINIGRQDAPPLFDIPLP CCCCCCCEEEEEEEECCCCCCCCCCCCCEEECCCC >Mature Secondary Structure SETKHDTLRFGIVTDIHYNPESKTGNQTQAGLERCIEHWTREGAEFVIQLGDLISREGP CCCCCCEEEEEEEEEEEECCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCC EAESDLIAVRDMLARFPGKVYHVAGNHCLAVPPERYKTIMGLDSLYYTFSSHGIRFIVLN CCHHHHHHHHHHHHHCCCEEEEEECCCEEECCHHHHHHHHHHHHHHHHHCCCCEEEEEEE GMDVSAVNDPQTKADRHLLEYYRDNVKAPFYCGAIGARQLEWLVNELDLALKNEEPVIIL CCEEECCCCCHHHHHHHHHHHHHHCCCCCEEECCCCHHHHHHHHHHHHHEECCCCCEEEE SHLPLLEETTDEKHGLLWNHEELTAILFRYPNIRACLSGHYHSAAHARSDGIHFIVLPAF ECCCCHHHCCCCCCCEEECHHHHHHHEHCCCCHHHHHCCCCCCHHHCCCCCEEEEEEECC AGWPPGECCLTVKITGENINIGRQDAPPLFDIPLP CCCCCCCEEEEEEEECCCCCCCCCCCCCEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA