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The map label for this gene is rlpA-1 [C]

Identifier: 21674887

GI number: 21674887

Start: 1968923

End: 1969405

Strand: Direct

Name: rlpA-1 [C]

Synonym: CT2077

Alternate gene names: 21674887

Gene position: 1968923-1969405 (Clockwise)

Preceding gene: 21674884

Following gene: 21674888

Centisome position: 91.37

GC content: 46.79

Gene sequence:

>483_bases
ATGAAAAAACGCTTTATTTTGTACAGCCACCTTGTATTGGCATTATCCTTCTTCATGTCAGTTTCTCCGTTCAACGCTTT
TGCAAGCCAAAACGGAGCCATAGCTCAATCCTCACCACAGAAAAACAGTTCATCCCGGAACGCAGTATTAAAATTCACAA
CTGCAAAGCCGCTGGACAACGGCAACCGGTTTATGGTTGCAATCGGAAAAGCATCCTATTACACCAACAGATTCCGCGGC
CAGACAACAGCAAACGGCGAAACGTTTGACATGAAAGAATTCACCGCTGCCCATCGTTCTCTGCCGTTCGGAACTATCGT
CAGGGTAACCAATCTCAACAACGGAAAAATGGTCTTCGTAAAGATCAACGATCGGGGGCCCTATGTCAAAAACCGGATCA
TCGACCTCTCGAAAGCTGCAGCCAAACAGCTCGACCTTGTTGACAGTGGCGTCGGCAGAGTCAAGATAGAAGCGTATAAC
TAA

Upstream 100 bases:

>100_bases
AAAAGAAACAGCGCTCTACCAGAAACATTCACATGAAAAAAACCAAAACCATACACAGCACCAGACCGAGTAGACGCGCG
TTAAACAACAGTATGCGATT

Downstream 100 bases:

>100_bases
CTCTCACATCAGGCTTTCATAAACTCCCTCAGTTTGTTCAGGCAATCGAAGGTTTTCGATTGCCTGTTTTTTTTATCTGA
GGATTTTCATCGATTCCGCT

Product: rare lipoprotein A

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 160; Mature: 160

Protein sequence:

>160_residues
MKKRFILYSHLVLALSFFMSVSPFNAFASQNGAIAQSSPQKNSSSRNAVLKFTTAKPLDNGNRFMVAIGKASYYTNRFRG
QTTANGETFDMKEFTAAHRSLPFGTIVRVTNLNNGKMVFVKINDRGPYVKNRIIDLSKAAAKQLDLVDSGVGRVKIEAYN

Sequences:

>Translated_160_residues
MKKRFILYSHLVLALSFFMSVSPFNAFASQNGAIAQSSPQKNSSSRNAVLKFTTAKPLDNGNRFMVAIGKASYYTNRFRG
QTTANGETFDMKEFTAAHRSLPFGTIVRVTNLNNGKMVFVKINDRGPYVKNRIIDLSKAAAKQLDLVDSGVGRVKIEAYN
>Mature_160_residues
MKKRFILYSHLVLALSFFMSVSPFNAFASQNGAIAQSSPQKNSSSRNAVLKFTTAKPLDNGNRFMVAIGKASYYTNRFRG
QTTANGETFDMKEFTAAHRSLPFGTIVRVTNLNNGKMVFVKINDRGPYVKNRIIDLSKAAAKQLDLVDSGVGRVKIEAYN

Specific function: Unknown

COG id: COG0797

COG function: function code M; Lipoproteins

Gene ontology:

Cell location: Attached To The Membrane By A Lipid Anchor [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the rlpA family [H]

Homologues:

Organism=Escherichia coli, GI1786852, Length=88, Percent_Identity=46.5909090909091, Blast_Score=85, Evalue=2e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009009
- InterPro:   IPR012997 [H]

Pfam domain/function: PF03330 DPBB_1 [H]

EC number: NA

Molecular weight: Translated: 17737; Mature: 17737

Theoretical pI: Translated: 11.03; Mature: 11.03

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKRFILYSHLVLALSFFMSVSPFNAFASQNGAIAQSSPQKNSSSRNAVLKFTTAKPLDN
CCCEEEHHHHHHHHHHHHHHCCCCHHHHCCCCCEECCCCCCCCCCCCEEEEEEECCCCCC
GNRFMVAIGKASYYTNRFRGQTTANGETFDMKEFTAAHRSLPFGTIVRVTNLNNGKMVFV
CCEEEEEEECCCEEHHHCCCCCCCCCCEECHHHHHHHHHCCCCCEEEEEEECCCCEEEEE
KINDRGPYVKNRIIDLSKAAAKQLDLVDSGVGRVKIEAYN
EECCCCCCHHHHEEHHHHHHHHHHHHHCCCCCEEEEEEEC
>Mature Secondary Structure
MKKRFILYSHLVLALSFFMSVSPFNAFASQNGAIAQSSPQKNSSSRNAVLKFTTAKPLDN
CCCEEEHHHHHHHHHHHHHHCCCCHHHHCCCCCEECCCCCCCCCCCCEEEEEEECCCCCC
GNRFMVAIGKASYYTNRFRGQTTANGETFDMKEFTAAHRSLPFGTIVRVTNLNNGKMVFV
CCEEEEEEECCCEEHHHCCCCCCCCCCEECHHHHHHHHHCCCCCEEEEEEECCCCEEEEE
KINDRGPYVKNRIIDLSKAAAKQLDLVDSGVGRVKIEAYN
EECCCCCCHHHHEEHHHHHHHHHHHHHCCCCCEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9665876 [H]