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The map label for this gene is resD [H]

Identifier: 21674871

GI number: 21674871

Start: 1958002

End: 1958364

Strand: Direct

Name: resD [H]

Synonym: CT2061

Alternate gene names: 21674871

Gene position: 1958002-1958364 (Clockwise)

Preceding gene: 21674870

Following gene: 21674872

Centisome position: 90.86

GC content: 49.04

Gene sequence:

>363_bases
ATGAAAATTCTTGTCATCGATGACGATCCTTCCGTCAGAAAATTCATAACCACAACGCTGAAAAAGGAAAACTATGCCGT
TACCGAAGCGGAAAACGGCGCAGAAGGATTGATCAAACTTCAGCAGGAGAAAGACATCTCTATTATTATCACCGATCTGA
TCATGCCTGAAAAAGAGGGCATCGAAACGATCATGGAGGTGCGCAAGATCAATCCCGCTGTGAAAATTCTGGCCATTTCG
GGCGGAGGAAAAGCCGGCCCCGAAAATTTCCTGCTGCTTGCCGATGTCGTTGGAGCCAATGCCACGCTCAAAAAGCCCTT
TGGCGGCCAGGAACTGCTCATGTGCCTGCGCATGTTGGCCTGA

Upstream 100 bases:

>100_bases
ACGGCATAAACCACTTGTTAAAAAAACCGCTCAAGCTTGCTCACTTGGCGTTGGCTGTCAAAGAAGTACTCTCATCAACA
ACCAATCTCCTCACAGAAAT

Downstream 100 bases:

>100_bases
CCGGCACAAAGCCGCAGAATCTTTGTTGCACCGCTCTATTATTTTTTTTAACTTAAGCTAAGATATGACTATTCACTAAC
AAGGATTTTTCACCATGAAC

Product: response regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 120; Mature: 120

Protein sequence:

>120_residues
MKILVIDDDPSVRKFITTTLKKENYAVTEAENGAEGLIKLQQEKDISIIITDLIMPEKEGIETIMEVRKINPAVKILAIS
GGGKAGPENFLLLADVVGANATLKKPFGGQELLMCLRMLA

Sequences:

>Translated_120_residues
MKILVIDDDPSVRKFITTTLKKENYAVTEAENGAEGLIKLQQEKDISIIITDLIMPEKEGIETIMEVRKINPAVKILAIS
GGGKAGPENFLLLADVVGANATLKKPFGGQELLMCLRMLA
>Mature_120_residues
MKILVIDDDPSVRKFITTTLKKENYAVTEAENGAEGLIKLQQEKDISIIITDLIMPEKEGIETIMEVRKINPAVKILAIS
GGGKAGPENFLLLADVVGANATLKKPFGGQELLMCLRMLA

Specific function: Member of the two-component regulatory system ResD/ResE. Required for the expression of resA, ctaA, qcrABC and fnr; activation role in global regulation of aerobic and anaerobic respiration [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 response regulatory domain [H]

Homologues:

Organism=Escherichia coli, GI1788905, Length=81, Percent_Identity=37.037037037037, Blast_Score=59, Evalue=7e-11,

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011006
- InterPro:   IPR001867
- InterPro:   IPR001789
- InterPro:   IPR011991 [H]

Pfam domain/function: PF00072 Response_reg; PF00486 Trans_reg_C [H]

EC number: NA

Molecular weight: Translated: 13053; Mature: 13053

Theoretical pI: Translated: 4.92; Mature: 4.92

Prosite motif: PS50110 RESPONSE_REGULATORY

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
4.2 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
4.2 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKILVIDDDPSVRKFITTTLKKENYAVTEAENGAEGLIKLQQEKDISIIITDLIMPEKEG
CEEEEECCCCCHHHHHHHHHCCCCEEEECCCCCCCCEEEEECCCCEEEEEEECCCCCCCH
IETIMEVRKINPAVKILAISGGGKAGPENFLLLADVVGANATLKKPFGGQELLMCLRMLA
HHHHHHHHHCCCEEEEEEECCCCCCCCCCEEEEEEECCCCCEECCCCCCHHHHHHHHHHC
>Mature Secondary Structure
MKILVIDDDPSVRKFITTTLKKENYAVTEAENGAEGLIKLQQEKDISIIITDLIMPEKEG
CEEEEECCCCCHHHHHHHHHCCCCEEEECCCCCCCCEEEEECCCCEEEEEEECCCCCCCH
IETIMEVRKINPAVKILAISGGGKAGPENFLLLADVVGANATLKKPFGGQELLMCLRMLA
HHHHHHHHHCCCEEEEEEECCCCCCCCCCEEEEEEECCCCCEECCCCCCHHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7934829; 9384377; 8631715; 8682783 [H]