| Definition | Chlorobium tepidum TLS, complete genome. |
|---|---|
| Accession | NC_002932 |
| Length | 2,154,946 |
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The map label for this gene is sglT [H]
Identifier: 21674868
GI number: 21674868
Start: 1953950
End: 1955359
Strand: Direct
Name: sglT [H]
Synonym: CT2058
Alternate gene names: 21674868
Gene position: 1953950-1955359 (Clockwise)
Preceding gene: 21674867
Following gene: 21674869
Centisome position: 90.67
GC content: 59.93
Gene sequence:
>1410_bases ATGCAACCTCTCGATTACGCCATCATCATTCTCTTTCTGGCGGGCAACATGATGCTCGGTCTGTGGCAAGGACGGAGCAA CAAGCAGACCTCCGACTACTTTCTCGGCGGCCACAAGCTTCCGTGGTTCGCGGTGATGCTCTCCATCGTGGCCACCGAAA CCTCGGTGCTGACCTTCGTGAGCGTTCCGGGCCTGGCCTACCGGGGCGACTGGAGCTTCCTCCAGCTCGCGTTCGGCTAC ATCGTCGGGCGGATTCTGGTCAGCTTCATCCTGCTGCCCACCTATTTCAAACATGGCGTCACCTCGATCTATGAGGTGAT CGGCATGAGGTTCGGCCACGGTATCCAGAAAACCGCCTCGGTGATTTTTCTGATAACGAGGATTCTGGGCGACGGTATCC GCTTCCTCGCGACCGGCGTGGTGGTGCAGGCGGTCACCGGCTGGCCGCTCTCGCTCTCGGTGCTGGTCATCGGCATTGTC ACCCTCGTCTACACCATTTCGGGCGGGCTGAAAACCGTGGTGTGGCTCGACAGCATCCAGTTCGGGCTGTACCTCGGTGG CGGCGTTATCGCCATCGCCTTCATCCTCGCCCGCCTCGACGCGCCGCTGCCCGATCTTCTCGCGCCGCTCCTGGCCGCCG GAAAGCTGAAAATCATCGACACCGACCCGCACATCTTCACCAACCCGCTCTCGTTTGTCAGCGCCTTTTCCGGCGGTATC CTTCTTTCGCTCTGCTCGCACGGCGTCGATTACCTGATGGTGCAGCGCGTGCTCGGCTGCGACGGCCTCGGCTCGGCCCG CAAGGCGATGATCGCCAGCGGCGTGTTCGTACTCTTCCAGTTTGCGCTGTTCCTCCTGGCAGGTTCGCTGATCTATGTGT TTTTCCATGGTGCGCCACTCGTCAAAGATCGCGAATTCACCAGTTTCATCGTCAGAGCACTGCCCGCCGGCCTCAAGGGG CTGCTGCTGGCCGGAATTCTTTCTGCCGCCATGTCAACCTTGGCCTCATCGATCAACTCACTGGCCGCTTCGACGGTCAC CGACCTCATAAAAGGCAAGGCGTCGCTCAGCACATCACGCCTCATCAGCGTCGCCTGGGCCGCTGTGCTGATCGGCATCG CCCTTGTGTTCAACGAAAACGACAAGGCAATCGTCATGCTTGGCCTCGAAATCGCCTCGTTCACCTATGGCGGCCTGCTC GGGCTGTTCCTGCTCTCGAAAAGCAGCCGCAATTTCCACTCAACGAGCCTCATCGCCGGACTGCTGGCCAGTATGGCGGT GGTGTTCCTGCTCAAGCTCCTCGGCCTGGCATGGACATGGTACATTGCCGTTTCTGTAACGACTAACATCCTGACGACAG CCGGAGTCGAAGCGTTGCTTCCCGACAGGGAGTCTTTTGCACGGGAATAA
Upstream 100 bases:
>100_bases CGCTTCGTGGGAAAAAGACGAGGCAGAGTTCGCGGCGATCAAACCCAACTTCCACCTGTACAACAACTGACATCACAACC GATCCGGGCACCTGTTGAGC
Downstream 100 bases:
>100_bases CCGTGTTTGCGAACAAACCTTTATCTTGTGTAAATAGTATATGAGATAATGGCCCCATCTACCGCCCGTGTCGCAATGTA CCAGAGTAGGGTTTCTGAAT
Product: sodium:solute symporter family protein
Products: NA
Alternate protein names: Na(+)/glucose symporter [H]
Number of amino acids: Translated: 469; Mature: 469
Protein sequence:
>469_residues MQPLDYAIIILFLAGNMMLGLWQGRSNKQTSDYFLGGHKLPWFAVMLSIVATETSVLTFVSVPGLAYRGDWSFLQLAFGY IVGRILVSFILLPTYFKHGVTSIYEVIGMRFGHGIQKTASVIFLITRILGDGIRFLATGVVVQAVTGWPLSLSVLVIGIV TLVYTISGGLKTVVWLDSIQFGLYLGGGVIAIAFILARLDAPLPDLLAPLLAAGKLKIIDTDPHIFTNPLSFVSAFSGGI LLSLCSHGVDYLMVQRVLGCDGLGSARKAMIASGVFVLFQFALFLLAGSLIYVFFHGAPLVKDREFTSFIVRALPAGLKG LLLAGILSAAMSTLASSINSLAASTVTDLIKGKASLSTSRLISVAWAAVLIGIALVFNENDKAIVMLGLEIASFTYGGLL GLFLLSKSSRNFHSTSLIAGLLASMAVVFLLKLLGLAWTWYIAVSVTTNILTTAGVEALLPDRESFARE
Sequences:
>Translated_469_residues MQPLDYAIIILFLAGNMMLGLWQGRSNKQTSDYFLGGHKLPWFAVMLSIVATETSVLTFVSVPGLAYRGDWSFLQLAFGY IVGRILVSFILLPTYFKHGVTSIYEVIGMRFGHGIQKTASVIFLITRILGDGIRFLATGVVVQAVTGWPLSLSVLVIGIV TLVYTISGGLKTVVWLDSIQFGLYLGGGVIAIAFILARLDAPLPDLLAPLLAAGKLKIIDTDPHIFTNPLSFVSAFSGGI LLSLCSHGVDYLMVQRVLGCDGLGSARKAMIASGVFVLFQFALFLLAGSLIYVFFHGAPLVKDREFTSFIVRALPAGLKG LLLAGILSAAMSTLASSINSLAASTVTDLIKGKASLSTSRLISVAWAAVLIGIALVFNENDKAIVMLGLEIASFTYGGLL GLFLLSKSSRNFHSTSLIAGLLASMAVVFLLKLLGLAWTWYIAVSVTTNILTTAGVEALLPDRESFARE >Mature_469_residues MQPLDYAIIILFLAGNMMLGLWQGRSNKQTSDYFLGGHKLPWFAVMLSIVATETSVLTFVSVPGLAYRGDWSFLQLAFGY IVGRILVSFILLPTYFKHGVTSIYEVIGMRFGHGIQKTASVIFLITRILGDGIRFLATGVVVQAVTGWPLSLSVLVIGIV TLVYTISGGLKTVVWLDSIQFGLYLGGGVIAIAFILARLDAPLPDLLAPLLAAGKLKIIDTDPHIFTNPLSFVSAFSGGI LLSLCSHGVDYLMVQRVLGCDGLGSARKAMIASGVFVLFQFALFLLAGSLIYVFFHGAPLVKDREFTSFIVRALPAGLKG LLLAGILSAAMSTLASSINSLAASTVTDLIKGKASLSTSRLISVAWAAVLIGIALVFNENDKAIVMLGLEIASFTYGGLL GLFLLSKSSRNFHSTSLIAGLLASMAVVFLLKLLGLAWTWYIAVSVTTNILTTAGVEALLPDRESFARE
Specific function: Actively transports glucose into cells by Na(+) cotransport [H]
COG id: COG0591
COG function: function code ER; Na+/proline symporter
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family [H]
Homologues:
Organism=Homo sapiens, GI4507035, Length=426, Percent_Identity=28.6384976525822, Blast_Score=144, Evalue=2e-34, Organism=Homo sapiens, GI167466278, Length=450, Percent_Identity=28.2222222222222, Blast_Score=134, Evalue=2e-31, Organism=Homo sapiens, GI256985183, Length=450, Percent_Identity=27.3333333333333, Blast_Score=129, Evalue=7e-30, Organism=Homo sapiens, GI157671931, Length=343, Percent_Identity=29.1545189504373, Blast_Score=123, Evalue=5e-28, Organism=Homo sapiens, GI4507033, Length=387, Percent_Identity=25.3229974160207, Blast_Score=84, Evalue=4e-16, Organism=Homo sapiens, GI110835708, Length=424, Percent_Identity=23.5849056603774, Blast_Score=80, Evalue=5e-15, Organism=Homo sapiens, GI4507031, Length=416, Percent_Identity=22.8365384615385, Blast_Score=79, Evalue=9e-15, Organism=Homo sapiens, GI206597483, Length=392, Percent_Identity=24.234693877551, Blast_Score=78, Evalue=2e-14, Organism=Homo sapiens, GI17941285, Length=382, Percent_Identity=23.5602094240838, Blast_Score=77, Evalue=3e-14, Organism=Homo sapiens, GI206597487, Length=311, Percent_Identity=25.4019292604502, Blast_Score=72, Evalue=8e-13, Organism=Homo sapiens, GI109659839, Length=431, Percent_Identity=22.0417633410673, Blast_Score=71, Evalue=2e-12, Organism=Homo sapiens, GI14140236, Length=398, Percent_Identity=21.608040201005, Blast_Score=69, Evalue=9e-12, Organism=Homo sapiens, GI109659836, Length=415, Percent_Identity=22.6506024096386, Blast_Score=68, Evalue=1e-11, Organism=Escherichia coli, GI1790113, Length=339, Percent_Identity=24.4837758112094, Blast_Score=75, Evalue=7e-15, Organism=Caenorhabditis elegans, GI115533094, Length=379, Percent_Identity=29.5514511873351, Blast_Score=87, Evalue=1e-17, Organism=Caenorhabditis elegans, GI32566512, Length=278, Percent_Identity=23.3812949640288, Blast_Score=72, Evalue=8e-13, Organism=Drosophila melanogaster, GI28573698, Length=454, Percent_Identity=26.8722466960352, Blast_Score=128, Evalue=1e-29, Organism=Drosophila melanogaster, GI24651741, Length=472, Percent_Identity=23.9406779661017, Blast_Score=121, Evalue=1e-27, Organism=Drosophila melanogaster, GI24645928, Length=422, Percent_Identity=28.6729857819905, Blast_Score=119, Evalue=6e-27, Organism=Drosophila melanogaster, GI24651739, Length=423, Percent_Identity=23.6406619385343, Blast_Score=118, Evalue=8e-27, Organism=Drosophila melanogaster, GI281362918, Length=421, Percent_Identity=23.0403800475059, Blast_Score=110, Evalue=2e-24, Organism=Drosophila melanogaster, GI221459584, Length=402, Percent_Identity=27.6119402985075, Blast_Score=110, Evalue=2e-24, Organism=Drosophila melanogaster, GI221459588, Length=420, Percent_Identity=27.3809523809524, Blast_Score=108, Evalue=1e-23, Organism=Drosophila melanogaster, GI24650192, Length=406, Percent_Identity=26.3546798029557, Blast_Score=106, Evalue=4e-23, Organism=Drosophila melanogaster, GI221459586, Length=430, Percent_Identity=26.2790697674419, Blast_Score=101, Evalue=1e-21, Organism=Drosophila melanogaster, GI281362054, Length=468, Percent_Identity=25.8547008547009, Blast_Score=100, Evalue=2e-21, Organism=Drosophila melanogaster, GI281362052, Length=468, Percent_Identity=25.8547008547009, Blast_Score=100, Evalue=2e-21, Organism=Drosophila melanogaster, GI281362050, Length=468, Percent_Identity=25.8547008547009, Blast_Score=100, Evalue=2e-21, Organism=Drosophila melanogaster, GI24648056, Length=468, Percent_Identity=25.8547008547009, Blast_Score=100, Evalue=2e-21, Organism=Drosophila melanogaster, GI21356827, Length=468, Percent_Identity=25.8547008547009, Blast_Score=100, Evalue=2e-21, Organism=Drosophila melanogaster, GI24641117, Length=454, Percent_Identity=24.6696035242291, Blast_Score=100, Evalue=4e-21, Organism=Drosophila melanogaster, GI24640370, Length=435, Percent_Identity=25.0574712643678, Blast_Score=99, Evalue=7e-21, Organism=Drosophila melanogaster, GI28574994, Length=453, Percent_Identity=24.9448123620309, Blast_Score=96, Evalue=6e-20, Organism=Drosophila melanogaster, GI161076631, Length=345, Percent_Identity=27.2463768115942, Blast_Score=94, Evalue=2e-19, Organism=Drosophila melanogaster, GI281364280, Length=366, Percent_Identity=25.1366120218579, Blast_Score=89, Evalue=8e-18, Organism=Drosophila melanogaster, GI19920916, Length=395, Percent_Identity=26.3291139240506, Blast_Score=88, Evalue=1e-17, Organism=Drosophila melanogaster, GI221379702, Length=405, Percent_Identity=23.4567901234568, Blast_Score=76, Evalue=4e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001734 - InterPro: IPR018212 - InterPro: IPR019900 [H]
Pfam domain/function: PF00474 SSF [H]
EC number: NA
Molecular weight: Translated: 50112; Mature: 50112
Theoretical pI: Translated: 9.66; Mature: 9.66
Prosite motif: PS50283 NA_SOLUT_SYMP_3
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQPLDYAIIILFLAGNMMLGLWQGRSNKQTSDYFLGGHKLPWFAVMLSIVATETSVLTFV CCCHHHHHHHHHHHCCHHEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHEEEE SVPGLAYRGDWSFLQLAFGYIVGRILVSFILLPTYFKHGVTSIYEVIGMRFGHGIQKTAS ECCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHH VIFLITRILGDGIRFLATGVVVQAVTGWPLSLSVLVIGIVTLVYTISGGLKTVVWLDSIQ HHHHHHHHHHCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCEEEEEHHHHH FGLYLGGGVIAIAFILARLDAPLPDLLAPLLAAGKLKIIDTDPHIFTNPLSFVSAFSGGI HHHHCCHHHHHHHHHHHHHCCCCHHHHHHHHCCCCEEEEECCCCCCCCHHHHHHHHCCHH LLSLCSHGVDYLMVQRVLGCDGLGSARKAMIASGVFVLFQFALFLLAGSLIYVFFHGAPL HHHHHHCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC VKDREFTSFIVRALPAGLKGLLLAGILSAAMSTLASSINSLAASTVTDLIKGKASLSTSR CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHH LISVAWAAVLIGIALVFNENDKAIVMLGLEIASFTYGGLLGLFLLSKSSRNFHSTSLIAG HHHHHHHHHHHHHHHEEECCCCEEEEEEHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHH LLASMAVVFLLKLLGLAWTWYIAVSVTTNILTTAGVEALLPDRESFARE HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHCCCHHHHCCC >Mature Secondary Structure MQPLDYAIIILFLAGNMMLGLWQGRSNKQTSDYFLGGHKLPWFAVMLSIVATETSVLTFV CCCHHHHHHHHHHHCCHHEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHEEEE SVPGLAYRGDWSFLQLAFGYIVGRILVSFILLPTYFKHGVTSIYEVIGMRFGHGIQKTAS ECCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHH VIFLITRILGDGIRFLATGVVVQAVTGWPLSLSVLVIGIVTLVYTISGGLKTVVWLDSIQ HHHHHHHHHHCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCEEEEEHHHHH FGLYLGGGVIAIAFILARLDAPLPDLLAPLLAAGKLKIIDTDPHIFTNPLSFVSAFSGGI HHHHCCHHHHHHHHHHHHHCCCCHHHHHHHHCCCCEEEEECCCCCCCCHHHHHHHHCCHH LLSLCSHGVDYLMVQRVLGCDGLGSARKAMIASGVFVLFQFALFLLAGSLIYVFFHGAPL HHHHHHCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC VKDREFTSFIVRALPAGLKGLLLAGILSAAMSTLASSINSLAASTVTDLIKGKASLSTSR CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHH LISVAWAAVLIGIALVFNENDKAIVMLGLEIASFTYGGLLGLFLLSKSSRNFHSTSLIAG HHHHHHHHHHHHHHHEEECCCCEEEEEEHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHH LLASMAVVFLLKLLGLAWTWYIAVSVTTNILTTAGVEALLPDRESFARE HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHCCCHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 8652595; 10835424; 10757971 [H]