| Definition | Chlorobium tepidum TLS, complete genome. |
|---|---|
| Accession | NC_002932 |
| Length | 2,154,946 |
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The map label for this gene is 21674861
Identifier: 21674861
GI number: 21674861
Start: 1949112
End: 1949738
Strand: Reverse
Name: 21674861
Synonym: CT2051
Alternate gene names: NA
Gene position: 1949738-1949112 (Counterclockwise)
Preceding gene: 21674863
Following gene: 21674860
Centisome position: 90.48
GC content: 53.27
Gene sequence:
>627_bases ATGGAGGTTGTAGGAAGAAGCAGAGCAAAAGCGATCATCGAGACGCACCTGAACGATTCGCTGGTCTATTTCTCCGATCA TGTCAGGATTCTTAAGTGTAATCCATATTGTACCGGCGTCACCTACCTGAAAGAGCACGGAGTCTATCAGTGGATTTTTC AGGTCAACGATCCTCGGGAAAATCCCATAACGGCGGTTTTTTTCGTGACGCAGAACGAAGAGCACCTCGATAGCTCCCGT ACGGTTCCGGCAGGTCCGGTTTCGGAGGAAGAAAGCTTTCCTGACTCTGCTGTTTCGGGTCGGTGCATCCAGTGGGTCAA CGCTCCGCAGGTGCCTGATGTGCCGTTGAAAGAGAAGAACACCTTTGTCGGGCAGGCCAACACGAGGATTTGTCTCTACC CTCTCGAGGACCGGCGTACCGAAGTCCATTTCGAAACCGACATCACGCTCGATTTTGAACTCTCCTTTCCGCTCAACCTC ATGCCGGAAGGCATACTCAAATTCATGACCGAGGCGGTCATGTCCAAGATCATGCAGCAGGCCACCGAAAGCATGCTCTG CCAGGTGCAGTCCGACCTGTGCTGTTGTACCACTGCGGAACTGGACGCTTCGGGCGGAAAGGTCTGA
Upstream 100 bases:
>100_bases GCTATGCGGATCACGAAATGAGAGGAGGAACTCTTGGTTTTGGGGTGGCGTTCATTGAAAAATTACAAAATTTATTTCAC GATCAAGCGGTGTTGTTGTT
Downstream 100 bases:
>100_bases GTCCTGCTGCCGGTTTTCTCTGATTCCCTGTACGGCTGAATGCTTTTAGTTGCACAAGGAATTGTTTTTTTCTATTTTCG ATACCCTAACGGGGTATAGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 208; Mature: 208
Protein sequence:
>208_residues MEVVGRSRAKAIIETHLNDSLVYFSDHVRILKCNPYCTGVTYLKEHGVYQWIFQVNDPRENPITAVFFVTQNEEHLDSSR TVPAGPVSEEESFPDSAVSGRCIQWVNAPQVPDVPLKEKNTFVGQANTRICLYPLEDRRTEVHFETDITLDFELSFPLNL MPEGILKFMTEAVMSKIMQQATESMLCQVQSDLCCCTTAELDASGGKV
Sequences:
>Translated_208_residues MEVVGRSRAKAIIETHLNDSLVYFSDHVRILKCNPYCTGVTYLKEHGVYQWIFQVNDPRENPITAVFFVTQNEEHLDSSR TVPAGPVSEEESFPDSAVSGRCIQWVNAPQVPDVPLKEKNTFVGQANTRICLYPLEDRRTEVHFETDITLDFELSFPLNL MPEGILKFMTEAVMSKIMQQATESMLCQVQSDLCCCTTAELDASGGKV >Mature_208_residues MEVVGRSRAKAIIETHLNDSLVYFSDHVRILKCNPYCTGVTYLKEHGVYQWIFQVNDPRENPITAVFFVTQNEEHLDSSR TVPAGPVSEEESFPDSAVSGRCIQWVNAPQVPDVPLKEKNTFVGQANTRICLYPLEDRRTEVHFETDITLDFELSFPLNL MPEGILKFMTEAVMSKIMQQATESMLCQVQSDLCCCTTAELDASGGKV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23427; Mature: 23427
Theoretical pI: Translated: 4.53; Mature: 4.53
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.8 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 6.7 %Cys+Met (Translated Protein) 3.8 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 6.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEVVGRSRAKAIIETHLNDSLVYFSDHVRILKCNPYCTGVTYLKEHGVYQWIFQVNDPRE CCCCCCHHHHHHHHHCCCCCEEEEECCEEEEEECCCCCCHHHHHHCCEEEEEEEECCCCC NPITAVFFVTQNEEHLDSSRTVPAGPVSEEESFPDSAVSGRCIQWVNAPQVPDVPLKEKN CCEEEEEEEECCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCC TFVGQANTRICLYPLEDRRTEVHFETDITLDFELSFPLNLMPEGILKFMTEAVMSKIMQQ EEEECCCCEEEEEECCCCCEEEEEEEEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHH ATESMLCQVQSDLCCCTTAELDASGGKV HHHHHHHHHHCCEEEEEECEECCCCCCC >Mature Secondary Structure MEVVGRSRAKAIIETHLNDSLVYFSDHVRILKCNPYCTGVTYLKEHGVYQWIFQVNDPRE CCCCCCHHHHHHHHHCCCCCEEEEECCEEEEEECCCCCCHHHHHHCCEEEEEEEECCCCC NPITAVFFVTQNEEHLDSSRTVPAGPVSEEESFPDSAVSGRCIQWVNAPQVPDVPLKEKN CCEEEEEEEECCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCC TFVGQANTRICLYPLEDRRTEVHFETDITLDFELSFPLNLMPEGILKFMTEAVMSKIMQQ EEEECCCCEEEEEECCCCCEEEEEEEEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHH ATESMLCQVQSDLCCCTTAELDASGGKV HHHHHHHHHHCCEEEEEECEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA