| Definition | Chlorobium tepidum TLS, complete genome. |
|---|---|
| Accession | NC_002932 |
| Length | 2,154,946 |
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The map label for this gene is 21674836
Identifier: 21674836
GI number: 21674836
Start: 1923019
End: 1923489
Strand: Direct
Name: 21674836
Synonym: CT2026
Alternate gene names: NA
Gene position: 1923019-1923489 (Clockwise)
Preceding gene: 21674834
Following gene: 21674841
Centisome position: 89.24
GC content: 57.11
Gene sequence:
>471_bases TTGCCCGTATGTGAAACCCATGATTATGTACAAGCCATGAAACACTCAAACAAAACGTTCGGCGTCGTCCTTGCCATCGG CATGGGCGTGCTGTCAACCGGAACTCTTCCGGCAAACGCCTCGGCGGCGGTGGACGGTAAGATTGTCTTCGACAAAAATT GCAGCGTTTGTCACTCGATCGCCCCACCGCCAAAATCGGCTCCTCCCATTCTGCCCATCTCCGCCCGCTACCATCAGCGC TTTTCATCGCGCGCCAAAGGCATTAAATACATGGCTGACTTCATAAAGTCACCGTCAAAAGAGAAAGTGCTTGCCGACCA GCAGGCGATCACCCGCTTCGGTCTGATGCCACCGGTGCCGCTCAACGCCGAAGAGCTGAACGCCGTGGCCGCATGGGTTT GGGATCAAAACACGGGCGGCAACTGGGGACCAGGCCGTGGCGCACGACAGGGAAACGGTTACCAGCGCTGA
Upstream 100 bases:
>100_bases GTTTTATGGGCGCGGAAAAAACGGCTCTCGCCATGAACGGGTTTTGGCGCGGGTTTTTCCTTTTTTTAACTACCTTTAAA CGGGTTAAAGAATCTCTTCG
Downstream 100 bases:
>100_bases GCAATTGCCGTCAAAACCGGCCAACAAAAAAAGCAGCAGGTGCGACCCTGCTGCTTTCTCCCGCCTGAACAGCCTCATTA TGAGTGGTGAGGAGTACCCT
Product: c-type cytochrome, putative
Products: NA
Alternate protein names: C-Type Cytochrome; Cytochrome C
Number of amino acids: Translated: 156; Mature: 155
Protein sequence:
>156_residues MPVCETHDYVQAMKHSNKTFGVVLAIGMGVLSTGTLPANASAAVDGKIVFDKNCSVCHSIAPPPKSAPPILPISARYHQR FSSRAKGIKYMADFIKSPSKEKVLADQQAITRFGLMPPVPLNAEELNAVAAWVWDQNTGGNWGPGRGARQGNGYQR
Sequences:
>Translated_156_residues MPVCETHDYVQAMKHSNKTFGVVLAIGMGVLSTGTLPANASAAVDGKIVFDKNCSVCHSIAPPPKSAPPILPISARYHQR FSSRAKGIKYMADFIKSPSKEKVLADQQAITRFGLMPPVPLNAEELNAVAAWVWDQNTGGNWGPGRGARQGNGYQR >Mature_155_residues PVCETHDYVQAMKHSNKTFGVVLAIGMGVLSTGTLPANASAAVDGKIVFDKNCSVCHSIAPPPKSAPPILPISARYHQRF SSRAKGIKYMADFIKSPSKEKVLADQQAITRFGLMPPVPLNAEELNAVAAWVWDQNTGGNWGPGRGARQGNGYQR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16776; Mature: 16645
Theoretical pI: Translated: 9.99; Mature: 9.99
Prosite motif: PS51007 CYTC
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 5.1 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPVCETHDYVQAMKHSNKTFGVVLAIGMGVLSTGTLPANASAAVDGKIVFDKNCSVCHSI CCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEECCCCHHHCC APPPKSAPPILPISARYHQRFSSRAKGIKYMADFIKSPSKEKVLADQQAITRFGLMPPVP CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCC LNAEELNAVAAWVWDQNTGGNWGPGRGARQGNGYQR CCHHHHHEEEEEEEECCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure PVCETHDYVQAMKHSNKTFGVVLAIGMGVLSTGTLPANASAAVDGKIVFDKNCSVCHSI CCCCHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEECCCCHHHCC APPPKSAPPILPISARYHQRFSSRAKGIKYMADFIKSPSKEKVLADQQAITRFGLMPPVP CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCC LNAEELNAVAAWVWDQNTGGNWGPGRGARQGNGYQR CCHHHHHEEEEEEEECCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA