| Definition | Chlorobium tepidum TLS, complete genome. |
|---|---|
| Accession | NC_002932 |
| Length | 2,154,946 |
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The map label for this gene is 21674820
Identifier: 21674820
GI number: 21674820
Start: 1903358
End: 1906018
Strand: Reverse
Name: 21674820
Synonym: CT2009
Alternate gene names: NA
Gene position: 1906018-1903358 (Counterclockwise)
Preceding gene: 21674821
Following gene: 21674819
Centisome position: 88.45
GC content: 58.4
Gene sequence:
>2661_bases TTGTCTAACAACCAGTCCCGAATGACTCACAGAAACGCGAACCGGATCATCGCCGCCGGAATATTTCTGGTTGCCGAAGC GGTCTATCTCTCGACGATGGCCCCGACCTTTTCGTTTTGGGACTGCGGGGAGGTGATTGCCACCTCGTACACTCTCGGTA TTCCGCATCCGCCCGGCGCTCCGCTCTACCTTCTGGTCGGGCACCTCTTTTCGCTGCTTCCTTTTTTCCAGGATATCGGT GCGCGCCTCAACTTCTTCAGCACGCTGATCAGCTCGACGACCATCATGCTGACCTACCTGATTATTGTCCGGCTGATTGC GCTCTACCGCGACTCGAAGCCGGACGGCTGGAGTCTGCACGAACAGATCGCTGCTTACGGAGGCGGGGTGGTGGGTGCTC TGGCGCTCGCCTTTTCCGACAGCTTCTGGTTCAACGCCACGGAAACCGGTCTCTGGGCGGCATCGTCACTGCTGACGGCC ACCATCTTCTGGATGATGCTTTGCTGGTATGACGAAGACCCCGCGCCCGGCAGCGAGCGGTGGCTGCTCGGCGTGATGTA CCTGATCGGCCTCTCTATCGGCGTGCACCTGCTCTGCCTGCTGGCGCTCTTCGCGCTGGTGCTGATCTACTATTTTAAGA AATATACCGTCGATCTGAAATCGTTCAGCCTGATGACGCTTTTCAGCCTCGGGCTGTTTTTTCTGATATACAAGCTGATC ATCAAGGGCATACCGGTGCTGCTTGTCACCACCTCCTGGTGGGGCATGAGCCTGCTTGTTGCGGCGCTGGCATCCGGCAT CTGGTACAGCCATAAGAAGCGGCTCGTACTGCTGAACCTTGGGCTGTTCTCGGTAGTGCTGCTTATTCTCGGTTATACCT CCTACATGCTGATTTTTGTTCGTGCCCATGCCGGTCCGCCGATCAACGAGAATAACCCCTCGACGCTCCAGGCCTTTTTC TCCTACGTCAATCGCGAGCAGTACGGCGAGTGGCCACTGTGGCCGAGGCGCTGGTCGCCTGAGCCGGTCTATCAGTACTT CTATCAGAAATATTCGAGCGAGTGGGACTACTTCTGGCGCTACCAGCTCAACCAGATGTATCTCCGCTATTTCGGATGGC AGTTTATTGGCCGTTCCGCTGATGTCGAGGGGGCGGTTGTCGACTGGGGAAAGCTTTGGGGGATCCCTTTCCTCGTGGGG CTTTTCGGCGCGGGTGCCCATTTTCGCAAAAACTGGAAGATGGCGCTGCCTGTGGCCACGCTTTTCCTCATGACCGGTGT GATCCTCGTGCTTTACCTCAACCAGCCCGAACCGCAGCCGCGCGAGCGCGACTACAGCTACGTCGGCAGCTTTTTTGCCT TCGCTCTTTGGATTGGCATCGGTGTCGAGCGGCTCTTTACCTGGTTTTCCGGCAGGCTCAAGTCGCTCGATCCGAAGCAG CTCGTCTGGCTTGCCGTGGCGGTGGTGGCATCCGGCTTGCTCTCGATCAACGGGCGGATGCTCATGGCCAACTATCGCAC GCATGACCGCTCCGGCAATTACGTGCCGTGGGACTGGGCCTGGAATATGTTGCAGAGTTGCGAGAAGGATGCCATCCTCT TTACCAACGGCGATAACGACACCTTTCCACTCTGGTATCTTCAGGAGGTGGAACGCATCCGTACCGACGTGCGGGTAGTC AATCTCAGTCTGGCCAATACCGGCTGGTACCTGCTGCAACTCAAGCACGATAGCCCGCGTGGCGCAAAGCCGGTCAACAT CGAAATGCGTGACGATGACCTCGCCAACATCTCGTACGTGCCGGTCGATTCGGTCAACGTGGCCGTACCTGCAGGGATGG AGGCTCGAAAGCTCTACGACGACGCCCGGCGCTCTGGCGTCGCTCTGCCGGGCGCGCCCTCCGATTCGCTGCGCTGGACG CTGAAGCCCGCCCTGACCTACCAGGGCCAGGGATTCCTCCGCCCGCAGGACATCGCCGTTTATGCCATCGTGGTGGACAA TTTCGGCAAGCGTCCGATCTACTTCGCGCTGACCGTCGATCCTGCCGAGATGACCGGTCTCGACCGCAATCTGCGTCTCG ACGGGCTGGTGTATCGCCTCGTGCCACTGAAAAGCGATTCGGCGTTGAGCTTCGCTGACCCTGGCACGCTGTACGGCAAT CTGTTTAACGTCTATCGTTATCGCAACACCGGTAATCTTGCGGTCCACATCGATGAAACCTCCCGGAACCTGCTCGGCAA CTATCCGCCACTGTTCGCCCGTCTGGCCATCACCCTCTCTGCATCGCCGGAACAGGCGGTGATGGTCCCGGATGCTTCCG GTGCTTACAAAACTGTGCGCAGGGGAGAGCTCGCCCTCGAAGTGCTCGACCGCTATACCCGGCTGTTTCCGCTGAGCCGT TATCCGGTTACGCCAAAGCTTGCCGGATCGGTGGTTGCTATGTATGCGGCAGGCGGTGCAAACGAAAAAGCATATCCGTA TATTCATTATCTTGAAACACTGGCTGCCCAAAGCGGCGCGGAGCAGGAACCCGATCTGTACTTCACTCTGGCCCAGACGT ACCGTGCGGTGGGCAGGGTTCACGAGGCGGATCGGATCATGAAAGAACTGGAAACGGCGCTCCCTGAACTGCGGAAGCGC CTGGATTCACTCAAGCAATAG
Upstream 100 bases:
>100_bases TGTCAAAAAGGGCACGGTGACGCTGACCGAAGAAGGCTTTCTTTTTGCCGATCATGTGGCCGCCGAACTGCTTTCGGAGT GAATGCCCGGCTGATACGAA
Downstream 100 bases:
>100_bases TCTCTATTTTTCAATGCGCAATATTCACGCAACAGCGGTCATCGGCTCCGGAGCCGTGCTTGGCGAAGGGGTCGAAATCG GGCCTTACACCGTGATCGAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 886; Mature: 885
Protein sequence:
>886_residues MSNNQSRMTHRNANRIIAAGIFLVAEAVYLSTMAPTFSFWDCGEVIATSYTLGIPHPPGAPLYLLVGHLFSLLPFFQDIG ARLNFFSTLISSTTIMLTYLIIVRLIALYRDSKPDGWSLHEQIAAYGGGVVGALALAFSDSFWFNATETGLWAASSLLTA TIFWMMLCWYDEDPAPGSERWLLGVMYLIGLSIGVHLLCLLALFALVLIYYFKKYTVDLKSFSLMTLFSLGLFFLIYKLI IKGIPVLLVTTSWWGMSLLVAALASGIWYSHKKRLVLLNLGLFSVVLLILGYTSYMLIFVRAHAGPPINENNPSTLQAFF SYVNREQYGEWPLWPRRWSPEPVYQYFYQKYSSEWDYFWRYQLNQMYLRYFGWQFIGRSADVEGAVVDWGKLWGIPFLVG LFGAGAHFRKNWKMALPVATLFLMTGVILVLYLNQPEPQPRERDYSYVGSFFAFALWIGIGVERLFTWFSGRLKSLDPKQ LVWLAVAVVASGLLSINGRMLMANYRTHDRSGNYVPWDWAWNMLQSCEKDAILFTNGDNDTFPLWYLQEVERIRTDVRVV NLSLANTGWYLLQLKHDSPRGAKPVNIEMRDDDLANISYVPVDSVNVAVPAGMEARKLYDDARRSGVALPGAPSDSLRWT LKPALTYQGQGFLRPQDIAVYAIVVDNFGKRPIYFALTVDPAEMTGLDRNLRLDGLVYRLVPLKSDSALSFADPGTLYGN LFNVYRYRNTGNLAVHIDETSRNLLGNYPPLFARLAITLSASPEQAVMVPDASGAYKTVRRGELALEVLDRYTRLFPLSR YPVTPKLAGSVVAMYAAGGANEKAYPYIHYLETLAAQSGAEQEPDLYFTLAQTYRAVGRVHEADRIMKELETALPELRKR LDSLKQ
Sequences:
>Translated_886_residues MSNNQSRMTHRNANRIIAAGIFLVAEAVYLSTMAPTFSFWDCGEVIATSYTLGIPHPPGAPLYLLVGHLFSLLPFFQDIG ARLNFFSTLISSTTIMLTYLIIVRLIALYRDSKPDGWSLHEQIAAYGGGVVGALALAFSDSFWFNATETGLWAASSLLTA TIFWMMLCWYDEDPAPGSERWLLGVMYLIGLSIGVHLLCLLALFALVLIYYFKKYTVDLKSFSLMTLFSLGLFFLIYKLI IKGIPVLLVTTSWWGMSLLVAALASGIWYSHKKRLVLLNLGLFSVVLLILGYTSYMLIFVRAHAGPPINENNPSTLQAFF SYVNREQYGEWPLWPRRWSPEPVYQYFYQKYSSEWDYFWRYQLNQMYLRYFGWQFIGRSADVEGAVVDWGKLWGIPFLVG LFGAGAHFRKNWKMALPVATLFLMTGVILVLYLNQPEPQPRERDYSYVGSFFAFALWIGIGVERLFTWFSGRLKSLDPKQ LVWLAVAVVASGLLSINGRMLMANYRTHDRSGNYVPWDWAWNMLQSCEKDAILFTNGDNDTFPLWYLQEVERIRTDVRVV NLSLANTGWYLLQLKHDSPRGAKPVNIEMRDDDLANISYVPVDSVNVAVPAGMEARKLYDDARRSGVALPGAPSDSLRWT LKPALTYQGQGFLRPQDIAVYAIVVDNFGKRPIYFALTVDPAEMTGLDRNLRLDGLVYRLVPLKSDSALSFADPGTLYGN LFNVYRYRNTGNLAVHIDETSRNLLGNYPPLFARLAITLSASPEQAVMVPDASGAYKTVRRGELALEVLDRYTRLFPLSR YPVTPKLAGSVVAMYAAGGANEKAYPYIHYLETLAAQSGAEQEPDLYFTLAQTYRAVGRVHEADRIMKELETALPELRKR LDSLKQ >Mature_885_residues SNNQSRMTHRNANRIIAAGIFLVAEAVYLSTMAPTFSFWDCGEVIATSYTLGIPHPPGAPLYLLVGHLFSLLPFFQDIGA RLNFFSTLISSTTIMLTYLIIVRLIALYRDSKPDGWSLHEQIAAYGGGVVGALALAFSDSFWFNATETGLWAASSLLTAT IFWMMLCWYDEDPAPGSERWLLGVMYLIGLSIGVHLLCLLALFALVLIYYFKKYTVDLKSFSLMTLFSLGLFFLIYKLII KGIPVLLVTTSWWGMSLLVAALASGIWYSHKKRLVLLNLGLFSVVLLILGYTSYMLIFVRAHAGPPINENNPSTLQAFFS YVNREQYGEWPLWPRRWSPEPVYQYFYQKYSSEWDYFWRYQLNQMYLRYFGWQFIGRSADVEGAVVDWGKLWGIPFLVGL FGAGAHFRKNWKMALPVATLFLMTGVILVLYLNQPEPQPRERDYSYVGSFFAFALWIGIGVERLFTWFSGRLKSLDPKQL VWLAVAVVASGLLSINGRMLMANYRTHDRSGNYVPWDWAWNMLQSCEKDAILFTNGDNDTFPLWYLQEVERIRTDVRVVN LSLANTGWYLLQLKHDSPRGAKPVNIEMRDDDLANISYVPVDSVNVAVPAGMEARKLYDDARRSGVALPGAPSDSLRWTL KPALTYQGQGFLRPQDIAVYAIVVDNFGKRPIYFALTVDPAEMTGLDRNLRLDGLVYRLVPLKSDSALSFADPGTLYGNL FNVYRYRNTGNLAVHIDETSRNLLGNYPPLFARLAITLSASPEQAVMVPDASGAYKTVRRGELALEVLDRYTRLFPLSRY PVTPKLAGSVVAMYAAGGANEKAYPYIHYLETLAAQSGAEQEPDLYFTLAQTYRAVGRVHEADRIMKELETALPELRKRL DSLKQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 100223; Mature: 100092
Theoretical pI: Translated: 8.69; Mature: 8.69
Prosite motif: PS00189 LIPOYL
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSNNQSRMTHRNANRIIAAGIFLVAEAVYLSTMAPTFSFWDCGEVIATSYTLGIPHPPGA CCCCCCHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHEEECCCCCCCC PLYLLVGHLFSLLPFFQDIGARLNFFSTLISSTTIMLTYLIIVRLIALYRDSKPDGWSLH HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHH EQIAAYGGGVVGALALAFSDSFWFNATETGLWAASSLLTATIFWMMLCWYDEDPAPGSER HHHHHHCCHHHHHHHHHHCCCCEECCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCHH WLLGVMYLIGLSIGVHLLCLLALFALVLIYYFKKYTVDLKSFSLMTLFSLGLFFLIYKLI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECHHHHHHHHHHHHHHHHHHHHHH IKGIPVLLVTTSWWGMSLLVAALASGIWYSHKKRLVLLNLGLFSVVLLILGYTSYMLIFV HCCCCEEEEECCHHHHHHHHHHHHHHHHCCCCCEEEEEECCHHHHHHHHHHHHHHHHEEE RAHAGPPINENNPSTLQAFFSYVNREQYGEWPLWPRRWSPEPVYQYFYQKYSSEWDYFWR EECCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHCCCCCEEEE YQLNQMYLRYFGWQFIGRSADVEGAVVDWGKLWGIPFLVGLFGAGAHFRKNWKMALPVAT HHHHHHHHHHHHHHHHCCCCCCCCEEECHHHHHHHHHHHHHHCCCCHHHCCCCCHHHHHH LFLMTGVILVLYLNQPEPQPRERDYSYVGSFFAFALWIGIGVERLFTWFSGRLKSLDPKQ HHHHHHHHHEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHH LVWLAVAVVASGLLSINGRMLMANYRTHDRSGNYVPWDWAWNMLQSCEKDAILFTNGDND HHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCHHHHHHHHHCCCCCEEEEECCCCC TFPLWYLQEVERIRTDVRVVNLSLANTGWYLLQLKHDSPRGAKPVNIEMRDDDLANISYV CCHHHHHHHHHHHHHCEEEEEEEEECCCEEEEEEECCCCCCCCCEEEEECCCCCCCEEEE PVDSVNVAVPAGMEARKLYDDARRSGVALPGAPSDSLRWTLKPALTYQGQGFLRPQDIAV CCCCCCEEECCCCHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEEEEECCCCCCCCCCEEE YAIVVDNFGKRPIYFALTVDPAEMTGLDRNLRLDGLVYRLVPLKSDSALSFADPGTLYGN EEEEEECCCCCCEEEEEEECHHHHCCCCCCCEECCEEEEEEECCCCCCCCCCCCCHHHHH LFNVYRYRNTGNLAVHIDETSRNLLGNYPPLFARLAITLSASPEQAVMVPDASGAYKTVR HHHHEEEECCCCEEEEEECCCHHHCCCCCHHHEEEEEEEECCCCCEEEECCCCCHHHHHH RGELALEVLDRYTRLFPLSRYPVTPKLAGSVVAMYAAGGANEKAYPYIHYLETLAAQSGA HHHHHHHHHHHHHHHCCCCCCCCCHHHHHHEEEEEECCCCCCCCCHHHHHHHHHHHCCCC EQEPDLYFTLAQTYRAVGRVHEADRIMKELETALPELRKRLDSLKQ CCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure SNNQSRMTHRNANRIIAAGIFLVAEAVYLSTMAPTFSFWDCGEVIATSYTLGIPHPPGA CCCCCHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHEEECCCCCCCC PLYLLVGHLFSLLPFFQDIGARLNFFSTLISSTTIMLTYLIIVRLIALYRDSKPDGWSLH HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHH EQIAAYGGGVVGALALAFSDSFWFNATETGLWAASSLLTATIFWMMLCWYDEDPAPGSER HHHHHHCCHHHHHHHHHHCCCCEECCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCHH WLLGVMYLIGLSIGVHLLCLLALFALVLIYYFKKYTVDLKSFSLMTLFSLGLFFLIYKLI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECHHHHHHHHHHHHHHHHHHHHHH IKGIPVLLVTTSWWGMSLLVAALASGIWYSHKKRLVLLNLGLFSVVLLILGYTSYMLIFV HCCCCEEEEECCHHHHHHHHHHHHHHHHCCCCCEEEEEECCHHHHHHHHHHHHHHHHEEE RAHAGPPINENNPSTLQAFFSYVNREQYGEWPLWPRRWSPEPVYQYFYQKYSSEWDYFWR EECCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHCCCCCEEEE YQLNQMYLRYFGWQFIGRSADVEGAVVDWGKLWGIPFLVGLFGAGAHFRKNWKMALPVAT HHHHHHHHHHHHHHHHCCCCCCCCEEECHHHHHHHHHHHHHHCCCCHHHCCCCCHHHHHH LFLMTGVILVLYLNQPEPQPRERDYSYVGSFFAFALWIGIGVERLFTWFSGRLKSLDPKQ HHHHHHHHHEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHH LVWLAVAVVASGLLSINGRMLMANYRTHDRSGNYVPWDWAWNMLQSCEKDAILFTNGDND HHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCHHHHHHHHHCCCCCEEEEECCCCC TFPLWYLQEVERIRTDVRVVNLSLANTGWYLLQLKHDSPRGAKPVNIEMRDDDLANISYV CCHHHHHHHHHHHHHCEEEEEEEEECCCEEEEEEECCCCCCCCCEEEEECCCCCCCEEEE PVDSVNVAVPAGMEARKLYDDARRSGVALPGAPSDSLRWTLKPALTYQGQGFLRPQDIAV CCCCCCEEECCCCHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEEEEECCCCCCCCCCEEE YAIVVDNFGKRPIYFALTVDPAEMTGLDRNLRLDGLVYRLVPLKSDSALSFADPGTLYGN EEEEEECCCCCCEEEEEEECHHHHCCCCCCCEECCEEEEEEECCCCCCCCCCCCCHHHHH LFNVYRYRNTGNLAVHIDETSRNLLGNYPPLFARLAITLSASPEQAVMVPDASGAYKTVR HHHHEEEECCCCEEEEEECCCHHHCCCCCHHHEEEEEEEECCCCCEEEECCCCCHHHHHH RGELALEVLDRYTRLFPLSRYPVTPKLAGSVVAMYAAGGANEKAYPYIHYLETLAAQSGA HHHHHHHHHHHHHHHCCCCCCCCCHHHHHHEEEEEECCCCCCCCCHHHHHHHHHHHCCCC EQEPDLYFTLAQTYRAVGRVHEADRIMKELETALPELRKRLDSLKQ CCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA