Click here to switch to the map view.

The map label for this gene is 21674801

Identifier: 21674801

GI number: 21674801

Start: 1888001

End: 1888714

Strand: Reverse

Name: 21674801

Synonym: CT1990

Alternate gene names: NA

Gene position: 1888714-1888001 (Counterclockwise)

Preceding gene: 21674802

Following gene: 21674800

Centisome position: 87.65

GC content: 59.52

Gene sequence:

>714_bases
ATGACAGCCATAGCCCCTACCTTTTTCGACCTGCCTGTCGTGTGGCACAACGTTCTGGTCATGCTGCTCACGATCGCGTA
TGTCTTCAGCGTGCCGCTGCTCATGGACTGGCTCGTAACCAACCACGGTCTGCCGCGAGACATCAGCCGCAAGATCACCC
ACATCTGCGCCGGTTCGGTCATCGTGTTCCTGCCGCTCTTTCGCGACGGTGACTGGTCGCACTACCTGAACATCACGGTC
TTCGCCGTCTGGACGGTGCTGCTCATCCAGAAAGGACTGTTCGCTGCCGATGACGACCAGGCGGTCAAAACCATGACCCG
CACCGGCGACAAGCGCGAGCTGCTCAAAGGCCCGCTCTACTTCGTGATCGTCGCCATGATCTGTGGTACTCTCTACTACA
AGCAGTTCGCGGGTGTGCTCGCAATGGCTATCCTGGGCTGGGGTGACGGTCTTGCTCCCATTGTCGGTACGAGGATGGGG
AAAATGAAGTACAAGGTGTTCTGCGAACGGAGCGTCGAGGGGAGCATTGCCTTTCTCGCGGGCAGCCTCGCGGCGGGCCT
CTTCTTCGTCTGGCTGATCGTGCCGCAGGCTTTTAATCCCGCGAAAATCGCCATGATCGCTGTGGCGGCCACCGTCATTG
AAGCGCTCAGCCCGAAAGAGGTAGACAACATTCTCATTCCGGCGGAGGTCATCGCGCTCGCCGCGGTGCTCTGA

Upstream 100 bases:

>100_bases
GGTTCTAATGAATACCGGGCGAAAAAACGATGACGATACCCCGCACGAACATCCGTTTTTCAGGTCATCTTCCGTATAAC
CTTCACCATCCGGAGGCGGC

Downstream 100 bases:

>100_bases
ACCTGCTCACTCTACGCGATGCCTGGACTCTATTTTCTCAGCGATCTTCATCTCGGCCTGCAAGAGCCTCAGGCGGAGCA
GGAAAAACTCGAACGCCTCG

Product: hypothetical protein

Products: NA

Alternate protein names: Integral Membrane Protein

Number of amino acids: Translated: 237; Mature: 236

Protein sequence:

>237_residues
MTAIAPTFFDLPVVWHNVLVMLLTIAYVFSVPLLMDWLVTNHGLPRDISRKITHICAGSVIVFLPLFRDGDWSHYLNITV
FAVWTVLLIQKGLFAADDDQAVKTMTRTGDKRELLKGPLYFVIVAMICGTLYYKQFAGVLAMAILGWGDGLAPIVGTRMG
KMKYKVFCERSVEGSIAFLAGSLAAGLFFVWLIVPQAFNPAKIAMIAVAATVIEALSPKEVDNILIPAEVIALAAVL

Sequences:

>Translated_237_residues
MTAIAPTFFDLPVVWHNVLVMLLTIAYVFSVPLLMDWLVTNHGLPRDISRKITHICAGSVIVFLPLFRDGDWSHYLNITV
FAVWTVLLIQKGLFAADDDQAVKTMTRTGDKRELLKGPLYFVIVAMICGTLYYKQFAGVLAMAILGWGDGLAPIVGTRMG
KMKYKVFCERSVEGSIAFLAGSLAAGLFFVWLIVPQAFNPAKIAMIAVAATVIEALSPKEVDNILIPAEVIALAAVL
>Mature_236_residues
TAIAPTFFDLPVVWHNVLVMLLTIAYVFSVPLLMDWLVTNHGLPRDISRKITHICAGSVIVFLPLFRDGDWSHYLNITVF
AVWTVLLIQKGLFAADDDQAVKTMTRTGDKRELLKGPLYFVIVAMICGTLYYKQFAGVLAMAILGWGDGLAPIVGTRMGK
MKYKVFCERSVEGSIAFLAGSLAAGLFFVWLIVPQAFNPAKIAMIAVAATVIEALSPKEVDNILIPAEVIALAAVL

Specific function: Unknown

COG id: COG0170

COG function: function code I; Dolichol kinase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 25945; Mature: 25814

Theoretical pI: Translated: 8.06; Mature: 8.06

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTAIAPTFFDLPVVWHNVLVMLLTIAYVFSVPLLMDWLVTNHGLPRDISRKITHICAGSV
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCHH
IVFLPLFRDGDWSHYLNITVFAVWTVLLIQKGLFAADDDQAVKTMTRTGDKRELLKGPLY
HHEEEHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCHHHHHHCCHH
FVIVAMICGTLYYKQFAGVLAMAILGWGDGLAPIVGTRMGKMKYKVFCERSVEGSIAFLA
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHH
GSLAAGLFFVWLIVPQAFNPAKIAMIAVAATVIEALSPKEVDNILIPAEVIALAAVL
HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCHHHHCEECHHHHHHHHHCC
>Mature Secondary Structure 
TAIAPTFFDLPVVWHNVLVMLLTIAYVFSVPLLMDWLVTNHGLPRDISRKITHICAGSV
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCHH
IVFLPLFRDGDWSHYLNITVFAVWTVLLIQKGLFAADDDQAVKTMTRTGDKRELLKGPLY
HHEEEHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCHHHHHHCCHH
FVIVAMICGTLYYKQFAGVLAMAILGWGDGLAPIVGTRMGKMKYKVFCERSVEGSIAFLA
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHH
GSLAAGLFFVWLIVPQAFNPAKIAMIAVAATVIEALSPKEVDNILIPAEVIALAAVL
HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCHHHHCEECHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA