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The map label for this gene is (hspc4-1 [H]

Identifier: 21674781

GI number: 21674781

Start: 1868175

End: 1868603

Strand: Reverse

Name: (hspc4-1 [H]

Synonym: CT1970

Alternate gene names: 21674781

Gene position: 1868603-1868175 (Counterclockwise)

Preceding gene: 21674790

Following gene: 21674778

Centisome position: 86.71

GC content: 49.42

Gene sequence:

>429_bases
ATGGCACTCACACTTTATGGCAAAGACCCCCTGAAGATGTTCGAAGATGTGTTCAACGAAAGGCTGACACCGTTCATCAG
TTCGATGGGCTCGATGATGGCGCCGGCCTTCAAGGTGGATATCAGTGAAGATGAGAAGGCTATCTATCTCTCAGCCGACA
TTCCCGGCGTAAAGAAAGAGGATGTAAAGGTAAGCATTGAGGACGATGTCATTAGCATCAGTGCGGAGCGCACTCAGGAA
GAGGAGGAGAAAAAGAAAAACTACCACCGGGTCGAACGCTCGTGGGGTAGCCTGTCAAGAAGTTTCACCATCGGTGACAA
CGTGGATAGTGACAACATCACCGCCAATTACGATAATGGCGTGCTGAAGGTCGTTATTCCGAAAAAGGAACCCGAACAGA
AAAAGAGCAAAGAGATCGCCGTCAGCTGA

Upstream 100 bases:

>100_bases
AGAGCCTGAATGGAACTTTGGCGGGTGGAAAAGTGTTTCAATGTTTTGTACTTGTTGTTGTCAAACATTTTTTATGAACA
GATAAAAGGAGGAAATAACT

Downstream 100 bases:

>100_bases
TTTTTCTTCAGAACACAGGACTTCCCCAGCCTCATGTTTCAGACATGGGGCTTTTTTTATGGTTTCGTGGTGCGGGGAAG
GCGATTGTGTCCGTCAGTTT

Product: HSP20 family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 142; Mature: 141

Protein sequence:

>142_residues
MALTLYGKDPLKMFEDVFNERLTPFISSMGSMMAPAFKVDISEDEKAIYLSADIPGVKKEDVKVSIEDDVISISAERTQE
EEEKKKNYHRVERSWGSLSRSFTIGDNVDSDNITANYDNGVLKVVIPKKEPEQKKSKEIAVS

Sequences:

>Translated_142_residues
MALTLYGKDPLKMFEDVFNERLTPFISSMGSMMAPAFKVDISEDEKAIYLSADIPGVKKEDVKVSIEDDVISISAERTQE
EEEKKKNYHRVERSWGSLSRSFTIGDNVDSDNITANYDNGVLKVVIPKKEPEQKKSKEIAVS
>Mature_141_residues
ALTLYGKDPLKMFEDVFNERLTPFISSMGSMMAPAFKVDISEDEKAIYLSADIPGVKKEDVKVSIEDDVISISAERTQEE
EEKKKNYHRVERSWGSLSRSFTIGDNVDSDNITANYDNGVLKVVIPKKEPEQKKSKEIAVS

Specific function: Unknown

COG id: COG0071

COG function: function code O; Molecular chaperone (small heat shock protein)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the small heat shock protein (HSP20) family [H]

Homologues:

None

Paralogues:

None

Copy number: 686 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002068
- InterPro:   IPR008978 [H]

Pfam domain/function: PF00011 HSP20 [H]

EC number: NA

Molecular weight: Translated: 16008; Mature: 15877

Theoretical pI: Translated: 4.67; Mature: 4.67

Prosite motif: PS01031 HSP20

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MALTLYGKDPLKMFEDVFNERLTPFISSMGSMMAPAFKVDISEDEKAIYLSADIPGVKKE
CEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCCCCEEEEECCCCCCCCC
DVKVSIEDDVISISAERTQEEEEKKKNYHRVERSWGSLSRSFTIGDNVDSDNITANYDNG
CEEEEECCCEEEEEHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCEEEECCCC
VLKVVIPKKEPEQKKSKEIAVS
EEEEEECCCCCCCHHCCCCCCC
>Mature Secondary Structure 
ALTLYGKDPLKMFEDVFNERLTPFISSMGSMMAPAFKVDISEDEKAIYLSADIPGVKKE
EEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCCCCEEEEECCCCCCCCC
DVKVSIEDDVISISAERTQEEEEKKKNYHRVERSWGSLSRSFTIGDNVDSDNITANYDNG
CEEEEECCCEEEEEHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCEEEECCCC
VLKVVIPKKEPEQKKSKEIAVS
EEEEEECCCCCCCHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA