Definition Chlorobium tepidum TLS, complete genome.
Accession NC_002932
Length 2,154,946

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The map label for this gene is 21674777

Identifier: 21674777

GI number: 21674777

Start: 1865464

End: 1865976

Strand: Reverse

Name: 21674777

Synonym: CT1966

Alternate gene names: NA

Gene position: 1865976-1865464 (Counterclockwise)

Preceding gene: 21674778

Following gene: 21674776

Centisome position: 86.59

GC content: 48.54

Gene sequence:

>513_bases
ATGCAAAAGGTCTATAAACATGTACTGTCTGGGCTTTTATTATTAATGCTCTGTATATTGGCGGCAGGAAGCTTTGGCGT
TGGCGCGGCAGGAAACTCCGACGATGGCGCTACGACCACGAATTACAAGATTGGAGAGACAGCACACGTGGGGTATATGT
CATACGCTGTATGGAAAGCCTTCTACCGAAACCAGCTCAGTGATAATCCATACATCAATCAACCTCCAGATGCCGCGTAT
CTGTTCGTCGACATCACGGTTCGCAACGACGATAAAGAGGCGAGAACAATCGCACCCTTCAAGCTCATAGACGAAAACGG
CGCCGAATATGAGACAAGCAGCAACGCATGGTCGGTTGATGGCAGCATCGGTATTCTGGATAGTTTGAATCCGGGTGTAG
AGAAACGCGGGTATATTGTTTTTGATGTTCCGCGGGGCAAGCACTACAAGTTAGAGGTATCAGGTGGATACTGGTCCAGC
GATAAGGCTCTCGTCGATCTCGGACTAAAATGA

Upstream 100 bases:

>100_bases
CCGGGAACCTACGATACTACTGACATATCTCTAATGCTCATCTTCATTCCGCTAGCAATTACCATAGGTAACAAAAATCA
CGCAATAAAGGAGGTAAGCG

Downstream 100 bases:

>100_bases
TGCCCAACAAGGCGCTCCAGCGGACTGACCGACCGCCGCTCCGCGTCGGTCGGTCAGTCCGCCCCTGAGCTTCGGCGTTA
GCCCCCAAATACAATAAGCG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 170; Mature: 170

Protein sequence:

>170_residues
MQKVYKHVLSGLLLLMLCILAAGSFGVGAAGNSDDGATTTNYKIGETAHVGYMSYAVWKAFYRNQLSDNPYINQPPDAAY
LFVDITVRNDDKEARTIAPFKLIDENGAEYETSSNAWSVDGSIGILDSLNPGVEKRGYIVFDVPRGKHYKLEVSGGYWSS
DKALVDLGLK

Sequences:

>Translated_170_residues
MQKVYKHVLSGLLLLMLCILAAGSFGVGAAGNSDDGATTTNYKIGETAHVGYMSYAVWKAFYRNQLSDNPYINQPPDAAY
LFVDITVRNDDKEARTIAPFKLIDENGAEYETSSNAWSVDGSIGILDSLNPGVEKRGYIVFDVPRGKHYKLEVSGGYWSS
DKALVDLGLK
>Mature_170_residues
MQKVYKHVLSGLLLLMLCILAAGSFGVGAAGNSDDGATTTNYKIGETAHVGYMSYAVWKAFYRNQLSDNPYINQPPDAAY
LFVDITVRNDDKEARTIAPFKLIDENGAEYETSSNAWSVDGSIGILDSLNPGVEKRGYIVFDVPRGKHYKLEVSGGYWSS
DKALVDLGLK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18594; Mature: 18594

Theoretical pI: Translated: 5.21; Mature: 5.21

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQKVYKHVLSGLLLLMLCILAAGSFGVGAAGNSDDGATTTNYKIGETAHVGYMSYAVWKA
CHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEECCEECCCEEEHHHHHHHHHHH
FYRNQLSDNPYINQPPDAAYLFVDITVRNDDKEARTIAPFKLIDENGAEYETSSNAWSVD
HHHHCCCCCCCCCCCCCCEEEEEEEEEECCCCCCEEECCEEEECCCCCCEECCCCCEEEC
GSIGILDSLNPGVEKRGYIVFDVPRGKHYKLEVSGGYWSSDKALVDLGLK
CCEEEECCCCCCCCCCCEEEEECCCCCEEEEEECCCEECCCCEEEEECCC
>Mature Secondary Structure
MQKVYKHVLSGLLLLMLCILAAGSFGVGAAGNSDDGATTTNYKIGETAHVGYMSYAVWKA
CHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEECCEECCCEEEHHHHHHHHHHH
FYRNQLSDNPYINQPPDAAYLFVDITVRNDDKEARTIAPFKLIDENGAEYETSSNAWSVD
HHHHCCCCCCCCCCCCCCEEEEEEEEEECCCCCCEEECCEEEECCCCCCEECCCCCEEEC
GSIGILDSLNPGVEKRGYIVFDVPRGKHYKLEVSGGYWSSDKALVDLGLK
CCEEEECCCCCCCCCCCEEEEECCCCCEEEEEECCCEECCCCEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA