Definition Chlorobium tepidum TLS, complete genome.
Accession NC_002932
Length 2,154,946

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The map label for this gene is 21674768

Identifier: 21674768

GI number: 21674768

Start: 1850455

End: 1850871

Strand: Direct

Name: 21674768

Synonym: CT1956

Alternate gene names: NA

Gene position: 1850455-1850871 (Clockwise)

Preceding gene: 21674767

Following gene: 21674769

Centisome position: 85.87

GC content: 48.68

Gene sequence:

>417_bases
ATGCATATCCGAAAACATAGCGTCTGCAGAAATATTCTCCGCACTTTCGAGATCGCACTATTTTTTGCAATCTCGGTGCT
CGGATACGGCCTGCTGCTCAAAGCATCCTCATTTAACACCAAATCGAAAAAACGCGACCGTGAATCGATCGTTGTCCAGA
ACGCTGTTGATCTGAATGGACGGCACCGCGAACTAAAGGTACTCTCCGGCACGTTACTTTTTCCGAACGATACAAAAGCC
GCCCTGCCGAACCGGTACACCTTTACCGGCCAGTCTTTTTTGGCTATCTCCCCATTGCCGGCTCTCGCCCTTCATCTCCT
GTGTGAGAAAGAACTGACAGTCAACTATCGCAACAGGAACAGCCGAATATCCCGCCCATACAATCTTTTTGAACAGAACC
CTGTACTGCTGAATTAG

Upstream 100 bases:

>100_bases
AGTCGCTATTCCGAACGAAAAACTGCACTCGCCTGCATGACGTAGTAGCAACAAACTTATTGCGCAGATCAGGTCAGTAG
CGCACTCACAGAACCAGTTT

Downstream 100 bases:

>100_bases
CCCCGGAACACGGCAAAGCGCCAGTACTTTGCCAAATGGCAGTCGCTGCTGTTGCCCATATCATCGGGCGCGCGACATCG
GCCATATTTTGGTGGTCAGT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 138; Mature: 138

Protein sequence:

>138_residues
MHIRKHSVCRNILRTFEIALFFAISVLGYGLLLKASSFNTKSKKRDRESIVVQNAVDLNGRHRELKVLSGTLLFPNDTKA
ALPNRYTFTGQSFLAISPLPALALHLLCEKELTVNYRNRNSRISRPYNLFEQNPVLLN

Sequences:

>Translated_138_residues
MHIRKHSVCRNILRTFEIALFFAISVLGYGLLLKASSFNTKSKKRDRESIVVQNAVDLNGRHRELKVLSGTLLFPNDTKA
ALPNRYTFTGQSFLAISPLPALALHLLCEKELTVNYRNRNSRISRPYNLFEQNPVLLN
>Mature_138_residues
MHIRKHSVCRNILRTFEIALFFAISVLGYGLLLKASSFNTKSKKRDRESIVVQNAVDLNGRHRELKVLSGTLLFPNDTKA
ALPNRYTFTGQSFLAISPLPALALHLLCEKELTVNYRNRNSRISRPYNLFEQNPVLLN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15756; Mature: 15756

Theoretical pI: Translated: 10.87; Mature: 10.87

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHIRKHSVCRNILRTFEIALFFAISVLGYGLLLKASSFNTKSKKRDRESIVVQNAVDLNG
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCCHHHHHHHHEEEECCCCCCC
RHRELKVLSGTLLFPNDTKAALPNRYTFTGQSFLAISPLPALALHLLCEKELTVNYRNRN
CCEEEEEEECEEECCCCCCCCCCCCEEECCCCEEEECCHHHHHHHHHHCCCEEEEECCCC
SRISRPYNLFEQNPVLLN
CCCCCCCHHHCCCCEECC
>Mature Secondary Structure
MHIRKHSVCRNILRTFEIALFFAISVLGYGLLLKASSFNTKSKKRDRESIVVQNAVDLNG
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCCHHHHHHHHEEEECCCCCCC
RHRELKVLSGTLLFPNDTKAALPNRYTFTGQSFLAISPLPALALHLLCEKELTVNYRNRN
CCEEEEEEECEEECCCCCCCCCCCCEEECCCCEEEECCHHHHHHHHHHCCCEEEEECCCC
SRISRPYNLFEQNPVLLN
CCCCCCCHHHCCCCEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA