| Definition | Chlorobium tepidum TLS, complete genome. |
|---|---|
| Accession | NC_002932 |
| Length | 2,154,946 |
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The map label for this gene is 21674752
Identifier: 21674752
GI number: 21674752
Start: 1833343
End: 1835385
Strand: Reverse
Name: 21674752
Synonym: CT1940
Alternate gene names: NA
Gene position: 1835385-1833343 (Counterclockwise)
Preceding gene: 21674754
Following gene: 21674751
Centisome position: 85.17
GC content: 53.6
Gene sequence:
>2043_bases ATGGCTAATATTTCTCTCTATATCTCAGGACAGACAGAGCTGGATGACGTCTCCGAGTTTTTCCAGAAGCGGTTGATAGG CAAGGGTGAAACTCCCATCGCTTTTTTTGACGGGGTGTTTTACGAGTCTCATCAGGAACGGGTGGGCAACATCGTGTATC AGGATTATCTGATCTATACCGACAAGGCCCTCTACCTCTGGGCGCGAGGAGCTTCGAAAGACTTTCTTGACCGGTTCAGC CTTGGTGCTGTTTCGGTCAACAGCCGCAATAAGGACAGCGCTTTCGCGACCATGAATCTCAAGATCCGTCGTGAAGGCAA GGAGCCGATCTACGTGATTTTCGACATGGTCGAGATTCGTGAGGCCGATACAATCGTCAGGCTTCAGACTCTCGTCGAAT CGATTATCGAGGATTATCTCGGTATCAATTACCGTCAGGAAATTCCCCAGGATACTGCGGACAGGATTTTTCAGGCAGCA AGGACGCTCTGCCCGCCGAGACAGATCGCTCTTCAGCTCGATACTCCGCAGGCTCCCACGCCTGACGCTGGTATTGGCTA TGGGCAGGATCTGCTCGAACAGTATCGTGCGTCTGCTGGTTATGAGCAACCGCAAATGCCTTATCCGCCGTACCAGCCTT CGGGCACTGGCGGGGCGAGTCCCCGTTCCATGGGGTCGCAGGATGCCATGCGTGGTCTGGAGTCGATGTTGCCGGCTGAT CCCGCATCACTGAAACGGATTGCCGAACAGATCAAGAATATGGTTGGCGATGCTCCGTTCAAGATGCGTGACCAGGTGAT GAAAGATTTGCAGCATGTGCCTGGAGACATGGCCACGGTGCTGAACGCCCTGAACGAGCTTCTCTCCAATATCGCAGGCA ATCCTATGGCCGAGCGTTTCGTCATGAACGCAATCAAAACCGCTGTAGCCAACGACGGGGTGCTTGGTTCTCTCAGCAAA ATCATCAAGATGACCGGTTTCGGCAGCGGCGGTGGAAAAAAGAGTTCGAGGCCACCGGCGAACGAGTCACCTCGAGAGGA GCGTAGCACTGCGAAGGAGCGGAAATCGCCGTTTGTCGATGAGGAGCCGGATGAGGACGGTTCGACGATTCGCCGCAAGA AGATCAGCATCAAAGATGATGACAATCATACTGGTGCTGATTTATTCGCAGGCAATGACGAGCCGATCACTTCCCGCGAG AGTCGTCCACCAGTTTCCCGCAGCAGCGTTCCGGATGACAGCGATTCAGGCGCGGAACCGGGTGGGCGTCGCAAGAAGCT TTCAATCAAAATGGAGGACGACAACGAGATCGCCCGGAAGCTGATGAGTTACGACGAGCCCGAGCGTGAGGCACCGTCAC CTGCTCCAGTCGAAGCATCATCAGCCGTAAGCACTGAAAATGGTTCCGGGATTCGTCGCAAGAAGATCGCGATCAAAGCC GAAGAGGGCAGTGGCGCGGAGGCGGATATTGCCCGGAAACTGATGGATTACGACGAAGCATCACGCAGTGCGGTTACATC TGCGTTGTCTGGCGAAGTTCCGGGAAGCGTTTCCAGTGAAGAGCCGTCTGAGCCAGAGCCTCTCCGGAGAAAGAAAATCC AGATTAAGGCGGACGTCGAGCAAGAGAGCGAACCTATAGTTAAAGCTGAACCAGAAGAGCCAACCAGAAAAAAGATTCAG ATCAAAACTGAAACTGAGCCGGAACTGCCGGTGGTATCACCTGAATTGGAAATCAAATCCATGCTTGAGCCTGAGCCACA ACTGGAGGTGCCTGTTCAGAAGGCGAGCCAAATCGAGGCTGAGCCGGAAGAAGAGATCGATATCTCTGAAGAGGTTATCT TTTCAGCCCTTGGCGAAATAGAGGAGATGGAAGGTTCCAGTATATCACAAGAATATATGATCATTGAGTCCGACATTCCG GTTCGCAGAGCGGTTAGTGAGCCGGTCAAGGAGCCGGTCAGCGAGCCGGTTATCGAGAAAAAGCCTGAACAGGTCCGGCA TTCTTCCGGGAAAGTCAGTCACGGCAAACGGCGCGGCAGATAA
Upstream 100 bases:
>100_bases TCTCTTTGTTACGTAATTTATTTTTGTTTTCATATTTTAGTTGTTCGGTATTCCATCGATGATGAACGGGTATTACAGGT AACGTGACCGGAAGCGGTAA
Downstream 100 bases:
>100_bases GTCTGACGGTGATAAGCCTGAGGGAAGCAAGCATTCAGTTTACAGTCAAGTTTACACTATAGTTTTTCAACACCATGAGA ATCATCCTTTATTTGGGCAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 680; Mature: 679
Protein sequence:
>680_residues MANISLYISGQTELDDVSEFFQKRLIGKGETPIAFFDGVFYESHQERVGNIVYQDYLIYTDKALYLWARGASKDFLDRFS LGAVSVNSRNKDSAFATMNLKIRREGKEPIYVIFDMVEIREADTIVRLQTLVESIIEDYLGINYRQEIPQDTADRIFQAA RTLCPPRQIALQLDTPQAPTPDAGIGYGQDLLEQYRASAGYEQPQMPYPPYQPSGTGGASPRSMGSQDAMRGLESMLPAD PASLKRIAEQIKNMVGDAPFKMRDQVMKDLQHVPGDMATVLNALNELLSNIAGNPMAERFVMNAIKTAVANDGVLGSLSK IIKMTGFGSGGGKKSSRPPANESPREERSTAKERKSPFVDEEPDEDGSTIRRKKISIKDDDNHTGADLFAGNDEPITSRE SRPPVSRSSVPDDSDSGAEPGGRRKKLSIKMEDDNEIARKLMSYDEPEREAPSPAPVEASSAVSTENGSGIRRKKIAIKA EEGSGAEADIARKLMDYDEASRSAVTSALSGEVPGSVSSEEPSEPEPLRRKKIQIKADVEQESEPIVKAEPEEPTRKKIQ IKTETEPELPVVSPELEIKSMLEPEPQLEVPVQKASQIEAEPEEEIDISEEVIFSALGEIEEMEGSSISQEYMIIESDIP VRRAVSEPVKEPVSEPVIEKKPEQVRHSSGKVSHGKRRGR
Sequences:
>Translated_680_residues MANISLYISGQTELDDVSEFFQKRLIGKGETPIAFFDGVFYESHQERVGNIVYQDYLIYTDKALYLWARGASKDFLDRFS LGAVSVNSRNKDSAFATMNLKIRREGKEPIYVIFDMVEIREADTIVRLQTLVESIIEDYLGINYRQEIPQDTADRIFQAA RTLCPPRQIALQLDTPQAPTPDAGIGYGQDLLEQYRASAGYEQPQMPYPPYQPSGTGGASPRSMGSQDAMRGLESMLPAD PASLKRIAEQIKNMVGDAPFKMRDQVMKDLQHVPGDMATVLNALNELLSNIAGNPMAERFVMNAIKTAVANDGVLGSLSK IIKMTGFGSGGGKKSSRPPANESPREERSTAKERKSPFVDEEPDEDGSTIRRKKISIKDDDNHTGADLFAGNDEPITSRE SRPPVSRSSVPDDSDSGAEPGGRRKKLSIKMEDDNEIARKLMSYDEPEREAPSPAPVEASSAVSTENGSGIRRKKIAIKA EEGSGAEADIARKLMDYDEASRSAVTSALSGEVPGSVSSEEPSEPEPLRRKKIQIKADVEQESEPIVKAEPEEPTRKKIQ IKTETEPELPVVSPELEIKSMLEPEPQLEVPVQKASQIEAEPEEEIDISEEVIFSALGEIEEMEGSSISQEYMIIESDIP VRRAVSEPVKEPVSEPVIEKKPEQVRHSSGKVSHGKRRGR >Mature_679_residues ANISLYISGQTELDDVSEFFQKRLIGKGETPIAFFDGVFYESHQERVGNIVYQDYLIYTDKALYLWARGASKDFLDRFSL GAVSVNSRNKDSAFATMNLKIRREGKEPIYVIFDMVEIREADTIVRLQTLVESIIEDYLGINYRQEIPQDTADRIFQAAR TLCPPRQIALQLDTPQAPTPDAGIGYGQDLLEQYRASAGYEQPQMPYPPYQPSGTGGASPRSMGSQDAMRGLESMLPADP ASLKRIAEQIKNMVGDAPFKMRDQVMKDLQHVPGDMATVLNALNELLSNIAGNPMAERFVMNAIKTAVANDGVLGSLSKI IKMTGFGSGGGKKSSRPPANESPREERSTAKERKSPFVDEEPDEDGSTIRRKKISIKDDDNHTGADLFAGNDEPITSRES RPPVSRSSVPDDSDSGAEPGGRRKKLSIKMEDDNEIARKLMSYDEPEREAPSPAPVEASSAVSTENGSGIRRKKIAIKAE EGSGAEADIARKLMDYDEASRSAVTSALSGEVPGSVSSEEPSEPEPLRRKKIQIKADVEQESEPIVKAEPEEPTRKKIQI KTETEPELPVVSPELEIKSMLEPEPQLEVPVQKASQIEAEPEEEIDISEEVIFSALGEIEEMEGSSISQEYMIIESDIPV RRAVSEPVKEPVSEPVIEKKPEQVRHSSGKVSHGKRRGR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 75042; Mature: 74911
Theoretical pI: Translated: 4.59; Mature: 4.59
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.1 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.1 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MANISLYISGQTELDDVSEFFQKRLIGKGETPIAFFDGVFYESHQERVGNIVYQDYLIYT CCEEEEEEECCCCHHHHHHHHHHHHCCCCCCCEEECCCHHHHHHHHHHHHHHHHHEEEEE DKALYLWARGASKDFLDRFSLGAVSVNSRNKDSAFATMNLKIRREGKEPIYVIFDMVEIR CCEEEEEECCCCHHHHHHHCCCEEEECCCCCCCEEEEEEEEEEECCCCCEEEEEEHHHHH EADTIVRLQTLVESIIEDYLGINYRQEIPQDTADRIFQAARTLCPPRQIALQLDTPQAPT HHHHHHHHHHHHHHHHHHHHCCCHHHHCCCHHHHHHHHHHHHCCCCCCEEEEECCCCCCC PDAGIGYGQDLLEQYRASAGYEQPQMPYPPYQPSGTGGASPRSMGSQDAMRGLESMLPAD CCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCC PASLKRIAEQIKNMVGDAPFKMRDQVMKDLQHVPGDMATVLNALNELLSNIAGNPMAERF HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCHHHHHH VMNAIKTAVANDGVLGSLSKIIKMTGFGSGGGKKSSRPPANESPREERSTAKERKSPFVD HHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCC EEPDEDGSTIRRKKISIKDDDNHTGADLFAGNDEPITSRESRPPVSRSSVPDDSDSGAEP CCCCCCCCHHHHEECCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC GGRRKKLSIKMEDDNEIARKLMSYDEPEREAPSPAPVEASSAVSTENGSGIRRKKIAIKA CCCCEEEEEEECCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEE EEGSGAEADIARKLMDYDEASRSAVTSALSGEVPGSVSSEEPSEPEPLRRKKIQIKADVE CCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHEEEEEECCC QESEPIVKAEPEEPTRKKIQIKTETEPELPVVSPELEIKSMLEPEPQLEVPVQKASQIEA CCCCCCEECCCCCCCCCEEEEEECCCCCCCCCCCCHHHHHHCCCCCCCCCCHHHHHHCCC EPEEEIDISEEVIFSALGEIEEMEGSSISQEYMIIESDIPVRRAVSEPVKEPVSEPVIEK CCHHHCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHCCHHHC KPEQVRHSSGKVSHGKRRGR CHHHHHHCCCCCCCCCCCCC >Mature Secondary Structure ANISLYISGQTELDDVSEFFQKRLIGKGETPIAFFDGVFYESHQERVGNIVYQDYLIYT CEEEEEEECCCCHHHHHHHHHHHHCCCCCCCEEECCCHHHHHHHHHHHHHHHHHEEEEE DKALYLWARGASKDFLDRFSLGAVSVNSRNKDSAFATMNLKIRREGKEPIYVIFDMVEIR CCEEEEEECCCCHHHHHHHCCCEEEECCCCCCCEEEEEEEEEEECCCCCEEEEEEHHHHH EADTIVRLQTLVESIIEDYLGINYRQEIPQDTADRIFQAARTLCPPRQIALQLDTPQAPT HHHHHHHHHHHHHHHHHHHHCCCHHHHCCCHHHHHHHHHHHHCCCCCCEEEEECCCCCCC PDAGIGYGQDLLEQYRASAGYEQPQMPYPPYQPSGTGGASPRSMGSQDAMRGLESMLPAD CCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCC PASLKRIAEQIKNMVGDAPFKMRDQVMKDLQHVPGDMATVLNALNELLSNIAGNPMAERF HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCHHHHHH VMNAIKTAVANDGVLGSLSKIIKMTGFGSGGGKKSSRPPANESPREERSTAKERKSPFVD HHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCC EEPDEDGSTIRRKKISIKDDDNHTGADLFAGNDEPITSRESRPPVSRSSVPDDSDSGAEP CCCCCCCCHHHHEECCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC GGRRKKLSIKMEDDNEIARKLMSYDEPEREAPSPAPVEASSAVSTENGSGIRRKKIAIKA CCCCEEEEEEECCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEE EEGSGAEADIARKLMDYDEASRSAVTSALSGEVPGSVSSEEPSEPEPLRRKKIQIKADVE CCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHEEEEEECCC QESEPIVKAEPEEPTRKKIQIKTETEPELPVVSPELEIKSMLEPEPQLEVPVQKASQIEA CCCCCCEECCCCCCCCCEEEEEECCCCCCCCCCCCHHHHHHCCCCCCCCCCHHHHHHCCC EPEEEIDISEEVIFSALGEIEEMEGSSISQEYMIIESDIPVRRAVSEPVKEPVSEPVIEK CCHHHCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHCCHHHC KPEQVRHSSGKVSHGKRRGR CHHHHHHCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA