| Definition | Chlorobium tepidum TLS, complete genome. |
|---|---|
| Accession | NC_002932 |
| Length | 2,154,946 |
Click here to switch to the map view.
The map label for this gene is 21674701
Identifier: 21674701
GI number: 21674701
Start: 1788288
End: 1789082
Strand: Reverse
Name: 21674701
Synonym: CT1889
Alternate gene names: NA
Gene position: 1789082-1788288 (Counterclockwise)
Preceding gene: 21674707
Following gene: 21674700
Centisome position: 83.02
GC content: 57.86
Gene sequence:
>795_bases ATGAACCAACGCCTCACAGCCGCTCTGCTTGTCGGCATTTCCGTAGCATTTATCGCCGCCGAAATTCTGGTTGCCGTGTT TGGCAGTTTCGATCAGGGCTGGATGGTGCTGTTCCTTTCTCTCTATGCCGGATTTGTCGGTCTGCTGTTCGGTTTGTCCA CCTTGTTGGAGGGGCGTCGCGAGGAGGTCGAGAGCGTCTCGGAGCGTCGTGCGCGGGCTCGGCGCGACGGGCTTGTGGGC AATCTGCTCGATGACTACGAGATCGACGAGGAGTTTCTCGGGCGCGGTGTGCGTAAACCAAGATCCAAAAAACCATCACC TTCTTCTTCATCGGGTGCTTCGAAGGAACGGATTCCTGATGACGAGGAGCTGAAGGCTGCCGTCACGGCCTATGCTGGCA TGGTCGGCGGCATTGTCACTCTGCGTGAAACCATCGAGTCGATGGACGACTCCGCTTTTTTGTCGATGGCACGCAAGGCC GGTATGGGTGGCGTAACGCGCGAACGAGTGCTGGCTCTCGTGGTTGAAATGGTTTCAGCGCAAGGGCCGACCAAAAGCGA TGAATCGCCAGCCCTGTCGCTCTCCATCGACAAGGAGTCGTTCGACGACTACATCAAGCGCTGCATGACTGAACCAGAGG TCTGCATCGACGATGATGCAACCGACAGCGAAGGCTTTTCGGTGGGGCTCGACGCGAGCGACCTGTCGTCGAGGCCGGGT ACGCCGCCAACCGAATTTTCCCATGATCCGAAAGCGGTCATGGAGCGCTTCAAACGCTCGACGGAGAAACGATGA
Upstream 100 bases:
>100_bases GCCGGCGGGCGAGATCAGTTGAGGCTTGGCGGGCATGTCGGGGCGAAAAGCGAATTATTCGTTACTTTAGTGGTCAAAAT ATAACAACTCATTTGACGAT
Downstream 100 bases:
>100_bases GGCGTGAATCCTTTCCGCCGCTGAGCAAGGCAATGCTGGGTCGTCTGGCGCGACTCGGGCAAAAGAAGCATCGCGACAGC GAAGGCCTGTTTCTTGCCGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 264; Mature: 264
Protein sequence:
>264_residues MNQRLTAALLVGISVAFIAAEILVAVFGSFDQGWMVLFLSLYAGFVGLLFGLSTLLEGRREEVESVSERRARARRDGLVG NLLDDYEIDEEFLGRGVRKPRSKKPSPSSSSGASKERIPDDEELKAAVTAYAGMVGGIVTLRETIESMDDSAFLSMARKA GMGGVTRERVLALVVEMVSAQGPTKSDESPALSLSIDKESFDDYIKRCMTEPEVCIDDDATDSEGFSVGLDASDLSSRPG TPPTEFSHDPKAVMERFKRSTEKR
Sequences:
>Translated_264_residues MNQRLTAALLVGISVAFIAAEILVAVFGSFDQGWMVLFLSLYAGFVGLLFGLSTLLEGRREEVESVSERRARARRDGLVG NLLDDYEIDEEFLGRGVRKPRSKKPSPSSSSGASKERIPDDEELKAAVTAYAGMVGGIVTLRETIESMDDSAFLSMARKA GMGGVTRERVLALVVEMVSAQGPTKSDESPALSLSIDKESFDDYIKRCMTEPEVCIDDDATDSEGFSVGLDASDLSSRPG TPPTEFSHDPKAVMERFKRSTEKR >Mature_264_residues MNQRLTAALLVGISVAFIAAEILVAVFGSFDQGWMVLFLSLYAGFVGLLFGLSTLLEGRREEVESVSERRARARRDGLVG NLLDDYEIDEEFLGRGVRKPRSKKPSPSSSSGASKERIPDDEELKAAVTAYAGMVGGIVTLRETIESMDDSAFLSMARKA GMGGVTRERVLALVVEMVSAQGPTKSDESPALSLSIDKESFDDYIKRCMTEPEVCIDDDATDSEGFSVGLDASDLSSRPG TPPTEFSHDPKAVMERFKRSTEKR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28718; Mature: 28718
Theoretical pI: Translated: 4.55; Mature: 4.55
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNQRLTAALLVGISVAFIAAEILVAVFGSFDQGWMVLFLSLYAGFVGLLFGLSTLLEGRR CCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH EEVESVSERRARARRDGLVGNLLDDYEIDEEFLGRGVRKPRSKKPSPSSSSGASKERIPD HHHHHHHHHHHHHHHCCCHHHHHHHCCCCHHHHHCCCCCCCCCCCCCCCCCCCCHHCCCC DEELKAAVTAYAGMVGGIVTLRETIESMDDSAFLSMARKAGMGGVTRERVLALVVEMVSA HHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHC QGPTKSDESPALSLSIDKESFDDYIKRCMTEPEVCIDDDATDSEGFSVGLDASDLSSRPG CCCCCCCCCCEEEEEECHHHHHHHHHHHCCCCCEEECCCCCCCCCCEECCCHHHHCCCCC TPPTEFSHDPKAVMERFKRSTEKR CCCCCCCCCHHHHHHHHHHHHCCC >Mature Secondary Structure MNQRLTAALLVGISVAFIAAEILVAVFGSFDQGWMVLFLSLYAGFVGLLFGLSTLLEGRR CCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH EEVESVSERRARARRDGLVGNLLDDYEIDEEFLGRGVRKPRSKKPSPSSSSGASKERIPD HHHHHHHHHHHHHHHCCCHHHHHHHCCCCHHHHHCCCCCCCCCCCCCCCCCCCCHHCCCC DEELKAAVTAYAGMVGGIVTLRETIESMDDSAFLSMARKAGMGGVTRERVLALVVEMVSA HHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHC QGPTKSDESPALSLSIDKESFDDYIKRCMTEPEVCIDDDATDSEGFSVGLDASDLSSRPG CCCCCCCCCCEEEEEECHHHHHHHHHHHCCCCCEEECCCCCCCCCCEECCCHHHHCCCCC TPPTEFSHDPKAVMERFKRSTEKR CCCCCCCCCHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA