| Definition | Chlorobium tepidum TLS, complete genome. |
|---|---|
| Accession | NC_002932 |
| Length | 2,154,946 |
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The map label for this gene is tkt [H]
Identifier: 21674682
GI number: 21674682
Start: 1767153
End: 1769219
Strand: Direct
Name: tkt [H]
Synonym: CT1870
Alternate gene names: 21674682
Gene position: 1767153-1769219 (Clockwise)
Preceding gene: 21674681
Following gene: 21674683
Centisome position: 82.0
GC content: 63.52
Gene sequence:
>2067_bases TTGACTGTCAGAGTCCGTCCGATTTCTCTCAATCTCAGAAACAATCCGATTATGACACGCACCCGTTCCATCGATGAAGA GGCCGTCGCCACCATCAGGCTTCTGGCGGTCGATATGGTAGAAAAGGCCAAATCGGGCCACCCTGGACTGCCGCTTGGTG CGGCTCCGATGGCGTACACGCTCTTTACCAAAATCATGCGGTTTAACCCCGCCAATCCGGAGTGGCCGAATCGCGACCGC TTCGTGCTCTCGGCGGGCCACGGCTCCGCGCTGCTCTACTCCATGTTGCACCTCTGCGGCTACGGCCTCGGCATGGATGA GCTGAAGCAGTTCCGGCAGCTCGGCAGCCGCACGCCTGGCCACCCCGAATACGGTCACACGCCGGGCGTCGAAACGACCA CTGGCCCGCTCGGCCAGGGCATTGCCACTGCCGTCGGAATGGCTGCCGCCGAACGCTTCCTCGCCACGAAACTCAACACG GCAGAGCGGGCACTCATCGACCACTTCACCTACGTCATCTGCGGCGACGGTGACCTCATGGAGGGCATCAGTTCGGAAGC CTCGTCGCTTGCCGGACACCTCAGGCTCGGGCGCCTCATCTGCCTCTACGACAGCAACCACATCAGCATCGAAGGCTCGA CCGGTCTGGCCTTCACGGAGGATGTTGCCCGCCGCTACGAGGCGTACGGCTGGCACGTCCTGTCGCACATCGACGGCAAC GACCTTGCGGCCATCGAGCAAGCAGTGCGCAATGCACAGGAGATCGACGACCGCCCGTCGCTCATCATCGTCAACACCAC CATCGGCTACGGTAGCCCGCACAAGCAGGGCACCGCGTCAGCACACGGCGAGCCGCTTGGCCCGGAAGAAACGAAGCTGG TCAAGCAGGCTTTCGGGTTTGATGAAAATGAATCGTTCGTCGTGTCGGATCGTGTGTACGACCATTTTCACGCGATAGCC GAACGCGGCGCGGCGCTCGAAGCCGAATGGCAAACGCAGTGGCAGTCGTTCAGGCAGGAAGAACCCGGCCTCGCCTCGGC GCTGACCGACCTGCTCGCGGGCCGCTTCCCTGAATCGTGGCTGCCCGAAATGCCGAAATTCACGACTGGCGAAAAGCTCG CCACGCGGCAGGCATCGAAAAGCGTGCTTGCCAAAATCGCAGAAAAGGCGCCGCTGCTGGCGGGCGGCTCGGCTGACCTC GCCCCGTCGAACGGCACGCTCATCGGAGCCGCTTTCGAGGCTGGAAGCTACGGCGGCTCGACCTTCCACTTCGGCGTTCG GGAACACGCAATGGGCGCACTTGTCAACGGCATGGCACTCTCAAAAATGATGATCCCCTATGGCGCGACCTTCCTCGTCT TTGCCGATTACATGAAACCCGCGCTGCGCATCGCCGCAATGATGCAATCCCCCTCGATCTTCATCTTCACGCACGACAGC ATCGGCCTTGGCGAGGACGGCCCAACCCACCAGCCCATCGAGCAGCTCGCCATGCTCCGCGCCATGCCGGGCTTCGACGT CTATCGCCCGGCGGACGCGAATGAAACGGCAGCGGCGTGGCTGCTCGCGCTGAAACGCCGCAAACCGGCAGCGCTCGTGC TCACACGCCAGGGTTTGCCAGTGCTCGACGACGCCGATGGACGCCTCCGCAACGGCGTGACAAAAGGCGGCTATGTGCTC GCGGAATGGGCAGATACGGACGACGACGACGACCGCCGGATCATTATCGTGGCGACGGGATCGGAGGTGCATCCCGCGCT CGAAGCAAAAACGCTGATCGAACAGGAGGGATTCGCGGCACGGGTGGTCTCGATGCCGTCGCGGGAGCTGTTCGCCGAGC AACCGGCGGAGTATCGCGCCGCCGTGCTGCCTCCGACGGTGCGGGCACGAGCCGTGGTCGAAGCCGCCGCGACCTTCGGC TGGCACGACATTGCGGGCGACGGCGGAATCGTGATCGGCATCGACCGCTTCGGCATGTCAGCCCCCAGCTCGCAGGTGAT GGAGCACTTCGGCTTCACGGCGGAAAACATCGCCGCCCGCGCCCTCGAACTCCTGAACCGGAAATGA
Upstream 100 bases:
>100_bases GACGCACTGTTATCAAATTAGGCTTCCTGCCTTTACCGCCCAAACCGGAGCGCATGTCAAATGTTTCCGATTTTTGTGAT AACCATCGGCAGTTGATACT
Downstream 100 bases:
>100_bases CCGCCATGACGCACTGGATCAGCGAACCGCTCGACGCGCTTCTCGAAAAAGCGGTCGCCTTCATCACCGACACGGCCTAC CGCGCGGTCGCCGAGCGTGG
Product: transketolase
Products: NA
Alternate protein names: TK [H]
Number of amino acids: Translated: 688; Mature: 687
Protein sequence:
>688_residues MTVRVRPISLNLRNNPIMTRTRSIDEEAVATIRLLAVDMVEKAKSGHPGLPLGAAPMAYTLFTKIMRFNPANPEWPNRDR FVLSAGHGSALLYSMLHLCGYGLGMDELKQFRQLGSRTPGHPEYGHTPGVETTTGPLGQGIATAVGMAAAERFLATKLNT AERALIDHFTYVICGDGDLMEGISSEASSLAGHLRLGRLICLYDSNHISIEGSTGLAFTEDVARRYEAYGWHVLSHIDGN DLAAIEQAVRNAQEIDDRPSLIIVNTTIGYGSPHKQGTASAHGEPLGPEETKLVKQAFGFDENESFVVSDRVYDHFHAIA ERGAALEAEWQTQWQSFRQEEPGLASALTDLLAGRFPESWLPEMPKFTTGEKLATRQASKSVLAKIAEKAPLLAGGSADL APSNGTLIGAAFEAGSYGGSTFHFGVREHAMGALVNGMALSKMMIPYGATFLVFADYMKPALRIAAMMQSPSIFIFTHDS IGLGEDGPTHQPIEQLAMLRAMPGFDVYRPADANETAAAWLLALKRRKPAALVLTRQGLPVLDDADGRLRNGVTKGGYVL AEWADTDDDDDRRIIIVATGSEVHPALEAKTLIEQEGFAARVVSMPSRELFAEQPAEYRAAVLPPTVRARAVVEAAATFG WHDIAGDGGIVIGIDRFGMSAPSSQVMEHFGFTAENIAARALELLNRK
Sequences:
>Translated_688_residues MTVRVRPISLNLRNNPIMTRTRSIDEEAVATIRLLAVDMVEKAKSGHPGLPLGAAPMAYTLFTKIMRFNPANPEWPNRDR FVLSAGHGSALLYSMLHLCGYGLGMDELKQFRQLGSRTPGHPEYGHTPGVETTTGPLGQGIATAVGMAAAERFLATKLNT AERALIDHFTYVICGDGDLMEGISSEASSLAGHLRLGRLICLYDSNHISIEGSTGLAFTEDVARRYEAYGWHVLSHIDGN DLAAIEQAVRNAQEIDDRPSLIIVNTTIGYGSPHKQGTASAHGEPLGPEETKLVKQAFGFDENESFVVSDRVYDHFHAIA ERGAALEAEWQTQWQSFRQEEPGLASALTDLLAGRFPESWLPEMPKFTTGEKLATRQASKSVLAKIAEKAPLLAGGSADL APSNGTLIGAAFEAGSYGGSTFHFGVREHAMGALVNGMALSKMMIPYGATFLVFADYMKPALRIAAMMQSPSIFIFTHDS IGLGEDGPTHQPIEQLAMLRAMPGFDVYRPADANETAAAWLLALKRRKPAALVLTRQGLPVLDDADGRLRNGVTKGGYVL AEWADTDDDDDRRIIIVATGSEVHPALEAKTLIEQEGFAARVVSMPSRELFAEQPAEYRAAVLPPTVRARAVVEAAATFG WHDIAGDGGIVIGIDRFGMSAPSSQVMEHFGFTAENIAARALELLNRK >Mature_687_residues TVRVRPISLNLRNNPIMTRTRSIDEEAVATIRLLAVDMVEKAKSGHPGLPLGAAPMAYTLFTKIMRFNPANPEWPNRDRF VLSAGHGSALLYSMLHLCGYGLGMDELKQFRQLGSRTPGHPEYGHTPGVETTTGPLGQGIATAVGMAAAERFLATKLNTA ERALIDHFTYVICGDGDLMEGISSEASSLAGHLRLGRLICLYDSNHISIEGSTGLAFTEDVARRYEAYGWHVLSHIDGND LAAIEQAVRNAQEIDDRPSLIIVNTTIGYGSPHKQGTASAHGEPLGPEETKLVKQAFGFDENESFVVSDRVYDHFHAIAE RGAALEAEWQTQWQSFRQEEPGLASALTDLLAGRFPESWLPEMPKFTTGEKLATRQASKSVLAKIAEKAPLLAGGSADLA PSNGTLIGAAFEAGSYGGSTFHFGVREHAMGALVNGMALSKMMIPYGATFLVFADYMKPALRIAAMMQSPSIFIFTHDSI GLGEDGPTHQPIEQLAMLRAMPGFDVYRPADANETAAAWLLALKRRKPAALVLTRQGLPVLDDADGRLRNGVTKGGYVLA EWADTDDDDDRRIIIVATGSEVHPALEAKTLIEQEGFAARVVSMPSRELFAEQPAEYRAAVLPPTVRARAVVEAAATFGW HDIAGDGGIVIGIDRFGMSAPSSQVMEHFGFTAENIAARALELLNRK
Specific function: Unknown
COG id: COG0021
COG function: function code G; Transketolase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the transketolase family [H]
Homologues:
Organism=Homo sapiens, GI205277463, Length=576, Percent_Identity=25.8680555555556, Blast_Score=174, Evalue=3e-43, Organism=Homo sapiens, GI4507521, Length=576, Percent_Identity=25.8680555555556, Blast_Score=174, Evalue=3e-43, Organism=Homo sapiens, GI133778974, Length=601, Percent_Identity=25.1247920133111, Blast_Score=156, Evalue=8e-38, Organism=Homo sapiens, GI225637459, Length=596, Percent_Identity=22.6510067114094, Blast_Score=128, Evalue=2e-29, Organism=Homo sapiens, GI225637463, Length=557, Percent_Identity=23.1597845601436, Blast_Score=120, Evalue=3e-27, Organism=Homo sapiens, GI225637461, Length=557, Percent_Identity=23.1597845601436, Blast_Score=120, Evalue=4e-27, Organism=Escherichia coli, GI1788808, Length=664, Percent_Identity=47.1385542168675, Blast_Score=598, Evalue=1e-172, Organism=Escherichia coli, GI48994911, Length=667, Percent_Identity=46.4767616191904, Blast_Score=593, Evalue=1e-170, Organism=Caenorhabditis elegans, GI17539652, Length=603, Percent_Identity=26.3681592039801, Blast_Score=175, Evalue=6e-44, Organism=Saccharomyces cerevisiae, GI6325331, Length=676, Percent_Identity=49.7041420118343, Blast_Score=616, Evalue=1e-177, Organism=Saccharomyces cerevisiae, GI6319593, Length=682, Percent_Identity=47.3607038123167, Blast_Score=581, Evalue=1e-166, Organism=Drosophila melanogaster, GI45551847, Length=668, Percent_Identity=24.8502994011976, Blast_Score=187, Evalue=3e-47, Organism=Drosophila melanogaster, GI45550715, Length=668, Percent_Identity=24.8502994011976, Blast_Score=187, Evalue=3e-47, Organism=Drosophila melanogaster, GI24645119, Length=640, Percent_Identity=24.84375, Blast_Score=174, Evalue=2e-43, Organism=Drosophila melanogaster, GI24666278, Length=583, Percent_Identity=25.7289879931389, Blast_Score=162, Evalue=5e-40,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR009014 - InterPro: IPR015941 - InterPro: IPR005475 - InterPro: IPR005478 - InterPro: IPR020826 - InterPro: IPR005476 - InterPro: IPR005474 [H]
Pfam domain/function: PF02779 Transket_pyr; PF02780 Transketolase_C; PF00456 Transketolase_N [H]
EC number: =2.2.1.1 [H]
Molecular weight: Translated: 74373; Mature: 74242
Theoretical pI: Translated: 5.79; Mature: 5.79
Prosite motif: PS00801 TRANSKETOLASE_1 ; PS00802 TRANSKETOLASE_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTVRVRPISLNLRNNPIMTRTRSIDEEAVATIRLLAVDMVEKAKSGHPGLPLGAAPMAYT CEEEEEEEEEEECCCCCEEHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHH LFTKIMRFNPANPEWPNRDRFVLSAGHGSALLYSMLHLCGYGLGMDELKQFRQLGSRTPG HHHHHHHCCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCC HPEYGHTPGVETTTGPLGQGIATAVGMAAAERFLATKLNTAERALIDHFTYVICGDGDLM CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHEEEEEECCCHHH EGISSEASSLAGHLRLGRLICLYDSNHISIEGSTGLAFTEDVARRYEAYGWHVLSHIDGN HHHHHHHHHHHHHHEECEEEEEEECCEEEEECCCCCEEHHHHHHHHHHHCEEEEEECCCC DLAAIEQAVRNAQEIDDRPSLIIVNTTIGYGSPHKQGTASAHGEPLGPEETKLVKQAFGF HHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCC DENESFVVSDRVYDHFHAIAERGAALEAEWQTQWQSFRQEEPGLASALTDLLAGRFPESW CCCCCEEEEHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCHHH LPEMPKFTTGEKLATRQASKSVLAKIAEKAPLLAGGSADLAPSNGTLIGAAFEAGSYGGS CCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCEEECCCCCCCCCCCEEEEEEECCCCCCCC TFHFGVREHAMGALVNGMALSKMMIPYGATFLVFADYMKPALRIAAMMQSPSIFIFTHDS EEECCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCEEEEEECCC IGLGEDGPTHQPIEQLAMLRAMPGFDVYRPADANETAAAWLLALKRRKPAALVLTRQGLP CCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHCCCCEEEEEEECCCC VLDDADGRLRNGVTKGGYVLAEWADTDDDDDRRIIIVATGSEVHPALEAKTLIEQEGFAA CEECCCCHHHCCCCCCCEEEEEECCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHCCCCE RVVSMPSRELFAEQPAEYRAAVLPPTVRARAVVEAAATFGWHDIAGDGGIVIGIDRFGMS EECCCCCHHHHHCCCHHHEEEECCCCHHHHHHHHHHHHCCCCEECCCCCEEEEECCCCCC APSSQVMEHFGFTAENIAARALELLNRK CCHHHHHHHHCCCHHHHHHHHHHHHCCC >Mature Secondary Structure TVRVRPISLNLRNNPIMTRTRSIDEEAVATIRLLAVDMVEKAKSGHPGLPLGAAPMAYT EEEEEEEEEEECCCCCEEHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHH LFTKIMRFNPANPEWPNRDRFVLSAGHGSALLYSMLHLCGYGLGMDELKQFRQLGSRTPG HHHHHHHCCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCC HPEYGHTPGVETTTGPLGQGIATAVGMAAAERFLATKLNTAERALIDHFTYVICGDGDLM CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHEEEEEECCCHHH EGISSEASSLAGHLRLGRLICLYDSNHISIEGSTGLAFTEDVARRYEAYGWHVLSHIDGN HHHHHHHHHHHHHHEECEEEEEEECCEEEEECCCCCEEHHHHHHHHHHHCEEEEEECCCC DLAAIEQAVRNAQEIDDRPSLIIVNTTIGYGSPHKQGTASAHGEPLGPEETKLVKQAFGF HHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCC DENESFVVSDRVYDHFHAIAERGAALEAEWQTQWQSFRQEEPGLASALTDLLAGRFPESW CCCCCEEEEHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCHHH LPEMPKFTTGEKLATRQASKSVLAKIAEKAPLLAGGSADLAPSNGTLIGAAFEAGSYGGS CCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCEEECCCCCCCCCCCEEEEEEECCCCCCCC TFHFGVREHAMGALVNGMALSKMMIPYGATFLVFADYMKPALRIAAMMQSPSIFIFTHDS EEECCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCEEEEEECCC IGLGEDGPTHQPIEQLAMLRAMPGFDVYRPADANETAAAWLLALKRRKPAALVLTRQGLP CCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHCCCCEEEEEEECCCC VLDDADGRLRNGVTKGGYVLAEWADTDDDDDRRIIIVATGSEVHPALEAKTLIEQEGFAA CEECCCCHHHCCCCCCCEEEEEECCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHCCCCE RVVSMPSRELFAEQPAEYRAAVLPPTVRARAVVEAAATFGWHDIAGDGGIVIGIDRFGMS EECCCCCHHHHHCCCHHHEEEECCCCHHHHHHHHHHHHCCCCEECCCCCEEEEECCCCCC APSSQVMEHFGFTAENIAARALELLNRK CCHHHHHHHHCCCHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 11058132 [H]