| Definition | Chlorobium tepidum TLS, complete genome. |
|---|---|
| Accession | NC_002932 |
| Length | 2,154,946 |
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The map label for this gene is 21674680
Identifier: 21674680
GI number: 21674680
Start: 1766378
End: 1766905
Strand: Reverse
Name: 21674680
Synonym: CT1868
Alternate gene names: NA
Gene position: 1766905-1766378 (Counterclockwise)
Preceding gene: 21674684
Following gene: 21674679
Centisome position: 81.99
GC content: 62.12
Gene sequence:
>528_bases GTGCGGGCGCGGGCTGCCGTCTATCGCTGTGTGGTGGATCTGGACAGCAAGCATCACCGCGACGGCATTCAGTGGAAGGT CGTCGATTTGCCACAGATGCAGTCGCAAGCACTGAAAGCGTGCGAGGACGGGTGGCACAGCCTTGCCATGGACGAAGCTT CGGGAGCTCTCGATTACTACCGGAGCGAATGGCTCGGCCCATCGAAGGAGTGTGTCCGCGCCGGGCGCGAAGCGTCGGCG GGCAAGTATTGCTGGAAGTATGGTAACGGGCACGATGCGTTTCGCGACCTCGAACCGCTGCTGCGGTGCGGGCGCAGAAT CTTTGTCTTCGGCGAGCCGTTTCGCAACGGCAAGGGGGTACACAATATCCATCAGAACCAGGGCGACCCGCCTGGCAGCC GGTGGGCAGCGGAGAACGGCCCGTGGCAAGATGGTGCGGTAATGGTCGAGCGACCGGACGCATCAGTGGCGGCATTTCTC AGCAAGTTCAGCACCCAGCGGTTCTGCGTTGATGAAGTGTGCGCTTGA
Upstream 100 bases:
>100_bases GCCACTGTTTGACGGTTATGGTGTTCTTGCGGGGTCGCTGCTCCGGTATAGCTGCGATAACCGTCAGGATGAATCGCACT ACTATCACTGTTCGCTTCTG
Downstream 100 bases:
>100_bases GCTTTCCCGGTGGCGGTGTTATCTTTTCCCGAACCTTGTTTTTCAACGATCAGAAAGGAGATTGATATGAACGGATATTC TGGTTTCCGGAGAGTGACGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 175; Mature: 175
Protein sequence:
>175_residues MRARAAVYRCVVDLDSKHHRDGIQWKVVDLPQMQSQALKACEDGWHSLAMDEASGALDYYRSEWLGPSKECVRAGREASA GKYCWKYGNGHDAFRDLEPLLRCGRRIFVFGEPFRNGKGVHNIHQNQGDPPGSRWAAENGPWQDGAVMVERPDASVAAFL SKFSTQRFCVDEVCA
Sequences:
>Translated_175_residues MRARAAVYRCVVDLDSKHHRDGIQWKVVDLPQMQSQALKACEDGWHSLAMDEASGALDYYRSEWLGPSKECVRAGREASA GKYCWKYGNGHDAFRDLEPLLRCGRRIFVFGEPFRNGKGVHNIHQNQGDPPGSRWAAENGPWQDGAVMVERPDASVAAFL SKFSTQRFCVDEVCA >Mature_175_residues MRARAAVYRCVVDLDSKHHRDGIQWKVVDLPQMQSQALKACEDGWHSLAMDEASGALDYYRSEWLGPSKECVRAGREASA GKYCWKYGNGHDAFRDLEPLLRCGRRIFVFGEPFRNGKGVHNIHQNQGDPPGSRWAAENGPWQDGAVMVERPDASVAAFL SKFSTQRFCVDEVCA
Specific function: Unknown
COG id: COG5634
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19661; Mature: 19661
Theoretical pI: Translated: 7.44; Mature: 7.44
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.0 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 6.3 %Cys+Met (Translated Protein) 4.0 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 6.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRARAAVYRCVVDLDSKHHRDGIQWKVVDLPQMQSQALKACEDGWHSLAMDEASGALDYY CCCHHHHHHHHHHCCCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RSEWLGPSKECVRAGREASAGKYCWKYGNGHDAFRDLEPLLRCGRRIFVFGEPFRNGKGV HHHCCCCCHHHHHCCCCCCCCCCEEECCCCCHHHHHHHHHHHCCCEEEEECCCCCCCCCC HNIHQNQGDPPGSRWAAENGPWQDGAVMVERPDASVAAFLSKFSTQRFCVDEVCA CCHHHCCCCCCCCCCCCCCCCCCCCEEEEECCCHHHHHHHHHHCCCHHHHHHHCC >Mature Secondary Structure MRARAAVYRCVVDLDSKHHRDGIQWKVVDLPQMQSQALKACEDGWHSLAMDEASGALDYY CCCHHHHHHHHHHCCCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RSEWLGPSKECVRAGREASAGKYCWKYGNGHDAFRDLEPLLRCGRRIFVFGEPFRNGKGV HHHCCCCCHHHHHCCCCCCCCCCEEECCCCCHHHHHHHHHHHCCCEEEEECCCCCCCCCC HNIHQNQGDPPGSRWAAENGPWQDGAVMVERPDASVAAFLSKFSTQRFCVDEVCA CCHHHCCCCCCCCCCCCCCCCCCCCEEEEECCCHHHHHHHHHHCCCHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA