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The map label for this gene is blc [C]

Identifier: 21674637

GI number: 21674637

Start: 1727749

End: 1728267

Strand: Reverse

Name: blc [C]

Synonym: CT1823

Alternate gene names: 21674637

Gene position: 1728267-1727749 (Counterclockwise)

Preceding gene: 21674638

Following gene: 21674616

Centisome position: 80.2

GC content: 55.3

Gene sequence:

>519_bases
ATGAAAAAACTCTTTTTGCCTATGCTGCTTTGGATGGCTGCGCTTGCCGGTTGCGCGAGTGCGCCGGAGGGGATTGTGGC
GGTGGATAACTTCAAGCTCGACCGCTATCTTGGCACTTGGTACGAAATTGCCCGAATCGACAACTGGTTTGAGCGCGGCT
CCGACCATGTTTCGGCCACCTACACCCTGCGCGACGACGGCAAGGTTCAGGTGCTCAACAAGGGCTACTATCCCGACAAA
AAGAAGTGGAAAACCGCCAAAGGCAAAGCCAAATTCGCCGGAAGTCCCAACGTTGGAGCGCTGAAGGTTTCATTTTTCGG
CCCCTTCTACGGTCCGTACAATGTCTTCGCCCTTGACCGCGAAAACTACTCGTGGGCAATGGTCACAGCCTCCAGCCGCG
ACTACTTCTGGATTTTAGCCAGAACCCCGCAGATCGACGACGCGCTCTACGAAAAGCTCCTCGAAAAGGCAAAGTCGCAG
GGCTTCGACACGGCCAAGGTTATGCGTACCCTGCAGTAG

Upstream 100 bases:

>100_bases
AAGTGTGCCGCAACGAGTCGCATAAAGACGGGTAGGGGGAGGACATCCGGAACTTTGAGGCGGGGATTTTGTTGTTCCTG
AAAAAAACGGGAGAACACCG

Downstream 100 bases:

>100_bases
TTGACTCGGTGGGTTGCATGGATGTTGTGGAAATCATTGCAATAATGTCCACAACATCTTCTTCTCATGCTTTCCGCTGG
TGTTGCAACTTCCACATCCC

Product: outer membrane lipoprotein Blc

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 172; Mature: 172

Protein sequence:

>172_residues
MKKLFLPMLLWMAALAGCASAPEGIVAVDNFKLDRYLGTWYEIARIDNWFERGSDHVSATYTLRDDGKVQVLNKGYYPDK
KKWKTAKGKAKFAGSPNVGALKVSFFGPFYGPYNVFALDRENYSWAMVTASSRDYFWILARTPQIDDALYEKLLEKAKSQ
GFDTAKVMRTLQ

Sequences:

>Translated_172_residues
MKKLFLPMLLWMAALAGCASAPEGIVAVDNFKLDRYLGTWYEIARIDNWFERGSDHVSATYTLRDDGKVQVLNKGYYPDK
KKWKTAKGKAKFAGSPNVGALKVSFFGPFYGPYNVFALDRENYSWAMVTASSRDYFWILARTPQIDDALYEKLLEKAKSQ
GFDTAKVMRTLQ
>Mature_172_residues
MKKLFLPMLLWMAALAGCASAPEGIVAVDNFKLDRYLGTWYEIARIDNWFERGSDHVSATYTLRDDGKVQVLNKGYYPDK
KKWKTAKGKAKFAGSPNVGALKVSFFGPFYGPYNVFALDRENYSWAMVTASSRDYFWILARTPQIDDALYEKLLEKAKSQ
GFDTAKVMRTLQ

Specific function: Involved in the storage or transport of lipids necessary for membrane maintenance under stressful conditions. Displays a binding preference for lysophospholipids [H]

COG id: COG3040

COG function: function code M; Bacterial lipocalin

Gene ontology:

Cell location: Cell outer membrane; Lipid-anchor [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the calycin superfamily. Lipocalin family [H]

Homologues:

Organism=Homo sapiens, GI4502163, Length=165, Percent_Identity=31.5151515151515, Blast_Score=74, Evalue=6e-14,
Organism=Escherichia coli, GI1790592, Length=169, Percent_Identity=52.6627218934911, Blast_Score=181, Evalue=2e-47,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012674
- InterPro:   IPR011038
- InterPro:   IPR013208
- InterPro:   IPR022271
- InterPro:   IPR002446
- InterPro:   IPR022272
- InterPro:   IPR002449 [H]

Pfam domain/function: PF08212 Lipocalin_2 [H]

EC number: NA

Molecular weight: Translated: 19592; Mature: 19592

Theoretical pI: Translated: 9.82; Mature: 9.82

Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS00213 LIPOCALIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKLFLPMLLWMAALAGCASAPEGIVAVDNFKLDRYLGTWYEIARIDNWFERGSDHVSAT
CCHHHHHHHHHHHHHHCCCCCCCCEEEEECEEHHHHHHHHHHHHHHHHHHHCCCCCEEEE
YTLRDDGKVQVLNKGYYPDKKKWKTAKGKAKFAGSPNVGALKVSFFGPFYGPYNVFALDR
EEECCCCEEEEEECCCCCCCHHCCCCCCCEEECCCCCCCEEEEEEECCCCCCEEEEEEEC
ENYSWAMVTASSRDYFWILARTPQIDDALYEKLLEKAKSQGFDTAKVMRTLQ
CCCEEEEEEECCCCEEEEEEECCCCCHHHHHHHHHHHHHCCCCHHHHHHHCC
>Mature Secondary Structure
MKKLFLPMLLWMAALAGCASAPEGIVAVDNFKLDRYLGTWYEIARIDNWFERGSDHVSAT
CCHHHHHHHHHHHHHHCCCCCCCCEEEEECEEHHHHHHHHHHHHHHHHHHHCCCCCEEEE
YTLRDDGKVQVLNKGYYPDKKKWKTAKGKAKFAGSPNVGALKVSFFGPFYGPYNVFALDR
EEECCCCEEEEEECCCCCCCHHCCCCCCCEEECCCCCCCEEEEEEECCCCCCEEEEEEEC
ENYSWAMVTASSRDYFWILARTPQIDDALYEKLLEKAKSQGFDTAKVMRTLQ
CCCEEEEEEECCCCEEEEEEECCCCCHHHHHHHHHHHHHCCCCHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7559452 [H]