Definition Chlorobium tepidum TLS, complete genome.
Accession NC_002932
Length 2,154,946

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The map label for this gene is yjcG [C]

Identifier: 21674620

GI number: 21674620

Start: 1709274

End: 1711058

Strand: Direct

Name: yjcG [C]

Synonym: CT1806

Alternate gene names: 21674620

Gene position: 1709274-1711058 (Clockwise)

Preceding gene: 21674619

Following gene: 21674621

Centisome position: 79.32

GC content: 58.02

Gene sequence:

>1785_bases
ATGAGTGTTCAAGTATGRACCTACCTCATTGTTGGCCTGACCTTCGCGATCTACATCGGTATCGCGATCTGGGCAAAAGC
AGGTTCAACGAAAGAATTTTACGTCGCCGGCGCAGGTGTGCATCCGATGATAAACGGCATGGCGACCGCCGCGGACTGGA
TGTCGGCAGCATCGTTTATTTCGATGGCCGGTCTGATCTCCTTCATGGGCTATGACGGCTCGGTTTATCTGATGGGCTGG
ACGGGCGGCTACGTGCTGCTGGCGCTCCTGCTCGCCCCCTACCTCCGGAAGTTCGGCAAGTTCACCGTTCCCGATTTCGT
GGGCGACCGCTACTACTCCAACGCCGCACGTACCGTGGCCGTGATCTGCGCGATCTTCGTCTCCTTCACCTACGTCGCCG
GCCAGATGCGCGGCGTCGGCGTGGTCTTCTCGCGCTTCCTCGAAGTCGATATCAACACCGGCATCATCATCGGCATGGCC
ATCGTTTTTTTCTACGCCGTGCTCGGCGGCATGAAGGGCATCACCTACACGCAGGTTGCCCAGTACTGGGTGCTGATCTT
CGCCTACATGGTTCCGGCCATCTTCCTGTCGATCATGATTACCAACAACGCCATTCCGCAGCTTGGCCTCGGCGGCACCA
CTTCGGACGGCGTCTATTTGCTTGACAAGCTCGACAACCTTTCCAAAGAGCTCGGTTTCGGGGCCTACACAACCGGCTCC
AAGCCGATGATCGACGTCTTCGCCATCACGCTCGCCCTGATGGTTGGCACCGCAGGTCTGCCCCACGTCATCGTGCGCTT
CTTCACGGTGCCGAAGGTTCGTGACGCCCGCATCTCGGCTGGCTGGGCGCTCATCTTCATCGCGCTGCTCTACACCACGG
CTCCGGCTATTGCCGCTTTCGCCCGCGTGAACCTCATCGACACGGTCAGCAACAAGGCTTACGCTGAATTGCCGGGCTGG
TTCAAAAAGTGGGAAAAAACCGGTCTGCTTGCCTGGATGGACAAAAACGGCGACGGCAAAATCCAGTACCTCGGCAAAAA
AGCCAACGGCGGCGATCCGTTCGAAGGCAAAAAACCTGAATTCACCAAAGAGATCGGCAAGAGCGGCGAACTCCTGATGT
CGAACAAACCGACCGACAACGCCAACGAGCTTTACATCGACAAGGATATTATGGTGCTGGCCAACCCGGAGATCGGCCGT
CTGCCGAACTGGGTGATCGCTCTCGTGGCGGCTGGCGGTCTTGCCGCCGCACTCTCAACGGCTGCTGGTCTTCTGCTGGT
CATCTCGACCTCGATTTCGCATGACCTGATCAAAAAGCAGATCAACCCCAACATCAGCGAAAGCGCCGAGCTGATGTACG
CCCGTATCGCGGTGGCCATCGCCATTCTTGTGGCGGGCTACTTCGGCATCAACCCGCCCGGCTTCGTGGCGGAGGTTGTG
GCGTTCGCCTTCGGTCTGGCCGCCGCATCATTCTTCCCGATCATCATTCTCGGCATTTTCTCGAAGCGGATGAACAAAGA
GGGCGCCATCGGCGGCATGATTACCGGCCTTGTCTTCACCGCGGCTTACATCGTGTACTTCAAGTTCATGAACCCGGCAA
TGAACAAGCCCGAGTTCTGGTTCCTCGGTATTTCGCCCGAAGGTATCGGTACCATCGGCATGCTGATCAACTTCGCGGTC
AGCTTCGTGGTTTCGCGAATCACCCCTGCTCCTCCGGAACAGATTCAGGAGCTGGTGGACAGCCTTCGCTACCCGAAAGG
CGCTGGCGAAGCTTCTGCTCACTAA

Upstream 100 bases:

>100_bases
CCCTGATGAACAGGCTCGACAAAAAATTCGACGTCCACGAAGACTGACCTGACCGTCAGGAAATCCAGAAAGTATTTTCC
AAACCCTCAACTCTACCATC

Downstream 100 bases:

>100_bases
GTCCGGAAACGGCACACAGCACAAAAAGGCGTGGAACAATCCACGCCTTTTTGCATTCCTCCCCCTTTGCAATAAAAAAT
GGCCTTGCAAAACAGACGGA

Product: sodium:solute symporter family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 594; Mature: 593

Protein sequence:

>594_residues
MSVQVXTYLIVGLTFAIYIGIAIWAKAGSTKEFYVAGAGVHPMINGMATAADWMSAASFISMAGLISFMGYDGSVYLMGW
TGGYVLLALLLAPYLRKFGKFTVPDFVGDRYYSNAARTVAVICAIFVSFTYVAGQMRGVGVVFSRFLEVDINTGIIIGMA
IVFFYAVLGGMKGITYTQVAQYWVLIFAYMVPAIFLSIMITNNAIPQLGLGGTTSDGVYLLDKLDNLSKELGFGAYTTGS
KPMIDVFAITLALMVGTAGLPHVIVRFFTVPKVRDARISAGWALIFIALLYTTAPAIAAFARVNLIDTVSNKAYAELPGW
FKKWEKTGLLAWMDKNGDGKIQYLGKKANGGDPFEGKKPEFTKEIGKSGELLMSNKPTDNANELYIDKDIMVLANPEIGR
LPNWVIALVAAGGLAAALSTAAGLLLVISTSISHDLIKKQINPNISESAELMYARIAVAIAILVAGYFGINPPGFVAEVV
AFAFGLAAASFFPIIILGIFSKRMNKEGAIGGMITGLVFTAAYIVYFKFMNPAMNKPEFWFLGISPEGIGTIGMLINFAV
SFVVSRITPAPPEQIQELVDSLRYPKGAGEASAH

Sequences:

>Translated_594_residues
MSVQVXTYLIVGLTFAIYIGIAIWAKAGSTKEFYVAGAGVHPMINGMATAADWMSAASFISMAGLISFMGYDGSVYLMGW
TGGYVLLALLLAPYLRKFGKFTVPDFVGDRYYSNAARTVAVICAIFVSFTYVAGQMRGVGVVFSRFLEVDINTGIIIGMA
IVFFYAVLGGMKGITYTQVAQYWVLIFAYMVPAIFLSIMITNNAIPQLGLGGTTSDGVYLLDKLDNLSKELGFGAYTTGS
KPMIDVFAITLALMVGTAGLPHVIVRFFTVPKVRDARISAGWALIFIALLYTTAPAIAAFARVNLIDTVSNKAYAELPGW
FKKWEKTGLLAWMDKNGDGKIQYLGKKANGGDPFEGKKPEFTKEIGKSGELLMSNKPTDNANELYIDKDIMVLANPEIGR
LPNWVIALVAAGGLAAALSTAAGLLLVISTSISHDLIKKQINPNISESAELMYARIAVAIAILVAGYFGINPPGFVAEVV
AFAFGLAAASFFPIIILGIFSKRMNKEGAIGGMITGLVFTAAYIVYFKFMNPAMNKPEFWFLGISPEGIGTIGMLINFAV
SFVVSRITPAPPEQIQELVDSLRYPKGAGEASAH
>Mature_593_residues
SVQVXTYLIVGLTFAIYIGIAIWAKAGSTKEFYVAGAGVHPMINGMATAADWMSAASFISMAGLISFMGYDGSVYLMGWT
GGYVLLALLLAPYLRKFGKFTVPDFVGDRYYSNAARTVAVICAIFVSFTYVAGQMRGVGVVFSRFLEVDINTGIIIGMAI
VFFYAVLGGMKGITYTQVAQYWVLIFAYMVPAIFLSIMITNNAIPQLGLGGTTSDGVYLLDKLDNLSKELGFGAYTTGSK
PMIDVFAITLALMVGTAGLPHVIVRFFTVPKVRDARISAGWALIFIALLYTTAPAIAAFARVNLIDTVSNKAYAELPGWF
KKWEKTGLLAWMDKNGDGKIQYLGKKANGGDPFEGKKPEFTKEIGKSGELLMSNKPTDNANELYIDKDIMVLANPEIGRL
PNWVIALVAAGGLAAALSTAAGLLLVISTSISHDLIKKQINPNISESAELMYARIAVAIAILVAGYFGINPPGFVAEVVA
FAFGLAAASFFPIIILGIFSKRMNKEGAIGGMITGLVFTAAYIVYFKFMNPAMNKPEFWFLGISPEGIGTIGMLINFAVS
FVVSRITPAPPEQIQELVDSLRYPKGAGEASAH

Specific function: Unknown

COG id: COG4147

COG function: function code R; Predicted symporter

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family [H]

Homologues:

Organism=Escherichia coli, GI1790503, Length=286, Percent_Identity=29.3706293706294, Blast_Score=122, Evalue=6e-29,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001734
- InterPro:   IPR019899 [H]

Pfam domain/function: PF00474 SSF [H]

EC number: NA

Molecular weight: Translated: 63779; Mature: 63648

Theoretical pI: Translated: 9.18; Mature: 9.18

Prosite motif: PS00457 NA_SOLUT_SYMP_2 ; PS50283 NA_SOLUT_SYMP_3

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSVQVXTYLIVGLTFAIYIGIAIWAKAGSTKEFYVAGAGVHPMINGMATAADWMSAASFI
CCEEHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHH
SMAGLISFMGYDGSVYLMGWTGGYVLLALLLAPYLRKFGKFTVPDFVGDRYYSNAARTVA
HHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHHHHHCCCCCCHHHCCHHHHHHHHHHH
VICAIFVSFTYVAGQMRGVGVVFSRFLEVDINTGIIIGMAIVFFYAVLGGMKGITYTQVA
HHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHH
QYWVLIFAYMVPAIFLSIMITNNAIPQLGLGGTTSDGVYLLDKLDNLSKELGFGAYTTGS
HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEHHHHHHHHHHHHCCCCCCCCC
KPMIDVFAITLALMVGTAGLPHVIVRFFTVPKVRDARISAGWALIFIALLYTTAPAIAAF
CCHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCHHCCCHHHHHHHHHHHHHHHHHHH
ARVNLIDTVSNKAYAELPGWFKKWEKTGLLAWMDKNGDGKIQYLGKKANGGDPFEGKKPE
HHHHHHHHHCCCHHHHCCHHHHHHHHCCEEEEEECCCCCEEEEEEECCCCCCCCCCCCCH
FTKEIGKSGELLMSNKPTDNANELYIDKDIMVLANPEIGRLPNWVIALVAAGGLAAALST
HHHHHCCCCCEEECCCCCCCCCEEEEECCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHH
AAGLLLVISTSISHDLIKKQINPNISESAELMYARIAVAIAILVAGYFGINPPGFVAEVV
HHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHH
AFAFGLAAASFFPIIILGIFSKRMNKEGAIGGMITGLVFTAAYIVYFKFMNPAMNKPEFW
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEE
FLGISPEGIGTIGMLINFAVSFVVSRITPAPPEQIQELVDSLRYPKGAGEASAH
EEEECCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCCCCC
>Mature Secondary Structure 
SVQVXTYLIVGLTFAIYIGIAIWAKAGSTKEFYVAGAGVHPMINGMATAADWMSAASFI
CEEHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHH
SMAGLISFMGYDGSVYLMGWTGGYVLLALLLAPYLRKFGKFTVPDFVGDRYYSNAARTVA
HHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHHHHHCCCCCCHHHCCHHHHHHHHHHH
VICAIFVSFTYVAGQMRGVGVVFSRFLEVDINTGIIIGMAIVFFYAVLGGMKGITYTQVA
HHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHH
QYWVLIFAYMVPAIFLSIMITNNAIPQLGLGGTTSDGVYLLDKLDNLSKELGFGAYTTGS
HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEHHHHHHHHHHHHCCCCCCCCC
KPMIDVFAITLALMVGTAGLPHVIVRFFTVPKVRDARISAGWALIFIALLYTTAPAIAAF
CCHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCHHCCCHHHHHHHHHHHHHHHHHHH
ARVNLIDTVSNKAYAELPGWFKKWEKTGLLAWMDKNGDGKIQYLGKKANGGDPFEGKKPE
HHHHHHHHHCCCHHHHCCHHHHHHHHCCEEEEEECCCCCEEEEEEECCCCCCCCCCCCCH
FTKEIGKSGELLMSNKPTDNANELYIDKDIMVLANPEIGRLPNWVIALVAAGGLAAALST
HHHHHCCCCCEEECCCCCCCCCEEEEECCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHH
AAGLLLVISTSISHDLIKKQINPNISESAELMYARIAVAIAILVAGYFGINPPGFVAEVV
HHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHH
AFAFGLAAASFFPIIILGIFSKRMNKEGAIGGMITGLVFTAAYIVYFKFMNPAMNKPEFW
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEE
FLGISPEGIGTIGMLINFAVSFVVSRITPAPPEQIQELVDSLRYPKGAGEASAH
EEEECCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 1356967 [H]