| Definition | Chlorobium tepidum TLS, complete genome. |
|---|---|
| Accession | NC_002932 |
| Length | 2,154,946 |
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The map label for this gene is 21674618
Identifier: 21674618
GI number: 21674618
Start: 1707375
End: 1708535
Strand: Direct
Name: 21674618
Synonym: CT1804
Alternate gene names: NA
Gene position: 1707375-1708535 (Clockwise)
Preceding gene: 21674617
Following gene: 21674619
Centisome position: 79.23
GC content: 53.92
Gene sequence:
>1161_bases TTGTCTTCAATACGCATCACACAACCTAACGGAGAACACACGATGAAAAAAATGCTATCTCTTGCTGCGATGTTCGCAGT ACTGGCATACGCATCACCCGCTTCGGCCGAGCTGAAACTCAGCGGCGACGCCAGCGTCCGGCTGAGAGACGTATCCTATT TCGGCGACGCCGATCAGTTTTCTTTCACTGGTTCCGCCGACGATGACGTTGTCTACCAGTACAGAGTTCGCCTGAACGCT GCTGCCGATCTGGGCAACGGCTACTTCTTCAAGGCTCTCGTCATGAACGAGGACAGGAACTATGCCGGTGGCTGGCAGAG CGTCAGACATGGCAACACCGAAACGATCAGCCTTGACATATCAAACTTCTACTTCGGCCGCATGCTTGAGAACTCCCACT GGATGGTTGGCCGCCTGCCGTTGAACTCTTTCGACAACCCGATCTTCGACCTGACACTCTACCCGGCACAGCCGCTTGCC AACCCTGTATATAACATTAACTTCGACCGTGTCTTTGGCGGCAACTACGGCGTCAAGCTTGGTAACGGTATGCTGAATGC AACCCTCTGCGTGCTTGACAACGACTCTCACAACAACACCTCTGCCGACGGCGACGGCCTTTTCAACGACGGCTATGCAC TGCACCTCGACTACAAGGTCAACGTTGGCAATGTCACCCTCGAGCCTCAGTTCCTGTCCGTGCTGACCAACTCGGATATT TGGTATCAGGATATCACAGGTCGTGTAACTACTCTCGCTTATAAAGTCACCCCATACACCTTCGGCGCTCTTGTTGGTGT TCCCGCTGGTAATGCAAAGCTGAGCTTTGGCGGCTTCTACACCACCTGTGACGACACCACTCCGAACGGAGGCCCTCATG TCAAATACGATGGCTACCTTCTCAGAGTGAAAGGCGAAATCGGTAACTTCATGGCCTGGTACGACTACAACCACACCACG GTCAAGCCTGGTGGCAACGACATCAAGCTCAACAACCACTTCGTGTGGGCGCAGTACAAGATTCCGGTGTACTCTTCGGC AATGGGCAGCGTTACGCTTCAGCCGACCCTCCGCTACCTTGCTTCGAAGCGCGACGATGGCTTTAATAACTACAGTGGCG AGCGTCTCCGCAGCGAGCTTTGGGCAACCGTTACCTTCTAA
Upstream 100 bases:
>100_bases TTCCTTAATTTAGCGCTAACCATAACCATACCTGTTCTTTTTTTTCTGTGGTTGCCTTGCCTACTAAAAGGGCAACCGAC CGTATCAGGCGGTCAAATTT
Downstream 100 bases:
>100_bases GGTTGTTCGGCAGCATTTCAAAAAAGCCGCAGGAAACTGCGGCTTTTTTATTGGCCTCTCTGACAGGTATGGACTGTGCG CCCGGTATCAATGAATAGTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 386; Mature: 385
Protein sequence:
>386_residues MSSIRITQPNGEHTMKKMLSLAAMFAVLAYASPASAELKLSGDASVRLRDVSYFGDADQFSFTGSADDDVVYQYRVRLNA AADLGNGYFFKALVMNEDRNYAGGWQSVRHGNTETISLDISNFYFGRMLENSHWMVGRLPLNSFDNPIFDLTLYPAQPLA NPVYNINFDRVFGGNYGVKLGNGMLNATLCVLDNDSHNNTSADGDGLFNDGYALHLDYKVNVGNVTLEPQFLSVLTNSDI WYQDITGRVTTLAYKVTPYTFGALVGVPAGNAKLSFGGFYTTCDDTTPNGGPHVKYDGYLLRVKGEIGNFMAWYDYNHTT VKPGGNDIKLNNHFVWAQYKIPVYSSAMGSVTLQPTLRYLASKRDDGFNNYSGERLRSELWATVTF
Sequences:
>Translated_386_residues MSSIRITQPNGEHTMKKMLSLAAMFAVLAYASPASAELKLSGDASVRLRDVSYFGDADQFSFTGSADDDVVYQYRVRLNA AADLGNGYFFKALVMNEDRNYAGGWQSVRHGNTETISLDISNFYFGRMLENSHWMVGRLPLNSFDNPIFDLTLYPAQPLA NPVYNINFDRVFGGNYGVKLGNGMLNATLCVLDNDSHNNTSADGDGLFNDGYALHLDYKVNVGNVTLEPQFLSVLTNSDI WYQDITGRVTTLAYKVTPYTFGALVGVPAGNAKLSFGGFYTTCDDTTPNGGPHVKYDGYLLRVKGEIGNFMAWYDYNHTT VKPGGNDIKLNNHFVWAQYKIPVYSSAMGSVTLQPTLRYLASKRDDGFNNYSGERLRSELWATVTF >Mature_385_residues SSIRITQPNGEHTMKKMLSLAAMFAVLAYASPASAELKLSGDASVRLRDVSYFGDADQFSFTGSADDDVVYQYRVRLNAA ADLGNGYFFKALVMNEDRNYAGGWQSVRHGNTETISLDISNFYFGRMLENSHWMVGRLPLNSFDNPIFDLTLYPAQPLAN PVYNINFDRVFGGNYGVKLGNGMLNATLCVLDNDSHNNTSADGDGLFNDGYALHLDYKVNVGNVTLEPQFLSVLTNSDIW YQDITGRVTTLAYKVTPYTFGALVGVPAGNAKLSFGGFYTTCDDTTPNGGPHVKYDGYLLRVKGEIGNFMAWYDYNHTTV KPGGNDIKLNNHFVWAQYKIPVYSSAMGSVTLQPTLRYLASKRDDGFNNYSGERLRSELWATVTF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 42811; Mature: 42680
Theoretical pI: Translated: 5.85; Mature: 5.85
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSSIRITQPNGEHTMKKMLSLAAMFAVLAYASPASAELKLSGDASVRLRDVSYFGDADQF CCCEEEECCCCHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCEEEEEEEEECCCCCCE SFTGSADDDVVYQYRVRLNAAADLGNGYFFKALVMNEDRNYAGGWQSVRHGNTETISLDI EECCCCCCCEEEEEEEEEEEEEECCCCEEEEEEEEECCCCCCCCCHHHHCCCCEEEEEEE SNFYFGRMLENSHWMVGRLPLNSFDNPIFDLTLYPAQPLANPVYNINFDRVFGGNYGVKL CCEEEEEEECCCCEEEEEECCCCCCCCEEEEEEECCCCCCCCEEEEEEEEEECCCCCEEE GNGMLNATLCVLDNDSHNNTSADGDGLFNDGYALHLDYKVNVGNVTLEPQFLSVLTNSDI CCCEEEEEEEEEECCCCCCCCCCCCCEECCCEEEEEEEEEEECCEEECHHHEEEEECCCE WYQDITGRVTTLAYKVTPYTFGALVGVPAGNAKLSFGGFYTTCDDTTPNGGPHVKYDGYL EEEECCCCEEEEEEEECCEEEEEEEECCCCCCEEEECCEEEEECCCCCCCCCEEEECCEE LRVKGEIGNFMAWYDYNHTTVKPGGNDIKLNNHFVWAQYKIPVYSSAMGSVTLQPTLRYL EEEECCCCCEEEEEECCCEEECCCCCEEEECCEEEEEEEECCEEECCCCCEEEHHHHHHH ASKRDDGFNNYSGERLRSELWATVTF HCCCCCCCCCCCHHHHHHHEEEEECC >Mature Secondary Structure SSIRITQPNGEHTMKKMLSLAAMFAVLAYASPASAELKLSGDASVRLRDVSYFGDADQF CCEEEECCCCHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCEEEEEEEEECCCCCCE SFTGSADDDVVYQYRVRLNAAADLGNGYFFKALVMNEDRNYAGGWQSVRHGNTETISLDI EECCCCCCCEEEEEEEEEEEEEECCCCEEEEEEEEECCCCCCCCCHHHHCCCCEEEEEEE SNFYFGRMLENSHWMVGRLPLNSFDNPIFDLTLYPAQPLANPVYNINFDRVFGGNYGVKL CCEEEEEEECCCCEEEEEECCCCCCCCEEEEEEECCCCCCCCEEEEEEEEEECCCCCEEE GNGMLNATLCVLDNDSHNNTSADGDGLFNDGYALHLDYKVNVGNVTLEPQFLSVLTNSDI CCCEEEEEEEEEECCCCCCCCCCCCCEECCCEEEEEEEEEEECCEEECHHHEEEEECCCE WYQDITGRVTTLAYKVTPYTFGALVGVPAGNAKLSFGGFYTTCDDTTPNGGPHVKYDGYL EEEECCCCEEEEEEEECCEEEEEEEECCCCCCEEEECCEEEEECCCCCCCCCEEEECCEE LRVKGEIGNFMAWYDYNHTTVKPGGNDIKLNNHFVWAQYKIPVYSSAMGSVTLQPTLRYL EEEECCCCCEEEEEECCCEEECCCCCEEEECCEEEEEEEECCEEECCCCCEEEHHHHHHH ASKRDDGFNNYSGERLRSELWATVTF HCCCCCCCCCCCHHHHHHHEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA