| Definition | Chlorobium tepidum TLS, complete genome. |
|---|---|
| Accession | NC_002932 |
| Length | 2,154,946 |
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The map label for this gene is ygcG [H]
Identifier: 21674604
GI number: 21674604
Start: 1695931
End: 1696740
Strand: Reverse
Name: ygcG [H]
Synonym: CT1790
Alternate gene names: 21674604
Gene position: 1696740-1695931 (Counterclockwise)
Preceding gene: 21674605
Following gene: 21674603
Centisome position: 78.74
GC content: 60.74
Gene sequence:
>810_bases ATGGACGGTCATTCCAAAAATCACTGTTCGCCGGTTGGGCGTTATTTCCCGATGCCGCTCGACCGGCGTTTCCTGCCCGG ATGGCTGGCGTTTCTCGCGCTGCTGGCGATCTGCGTTTTTCCGCTGATGGCAAAGGCCGCCGGTGTTCCGGCGCTTGTCG GCAGGGTCAACGATTACGCCGGGATGATTTCGCCGCAGGCTCGCTCGATCATCGACCAGAAGCTCAAGGCGCTCGAAGCC GAGGACGGCACGCAGGTTGCGGTGCTGACTGTGCCTTCGCTCGATGGCCAGCCCATCGAAGAGTTTTCGATCAAGGTGGC CGAGGCGTGGAAGATCGGGCAAAAAGGGAGGGATAACGGCATTCTTTTCATCGTCTCGAAAAATGACCGGGCGATGAGAA TCGAGGTTGGCTACGGCCTCGAAGGGCGCCTGACCGATCTTCAGGCGGGCCGGATTACCCGCGATGTCATCAAGCCGGCC TTCAAAAGCGGCGATTACGACAAGGGGTTCATCGATGGCGTCGATGCCATTGTTGCCTCGGTCAAGGGGGAGTACAAAGC GCCGAAAAGGAAAAACGATGATGGTGCGCCCTCTCCATTTCTGATTTTCATCATCCTTTTCGTGCTGTTTGTCGCGTCCC GTTTCATGCGCTTTTTCGGTGGTGGCGGCGGACCTTTCGGCTTTGGCGGGCCGGGCGGCGGCTTTTTCCCCGGCGGCGGT TTCGGCGGGGGAGGCGGCTCGTCCGACGACGGCGGCTTCAGTGGCGGCGGCGGTGATTTTGGCGGCGGCGGAGCGTCGGA CAACTGGTAG
Upstream 100 bases:
>100_bases CCGAACTCCCTGACCAACAGCTTGGTGCTCAAGCTCAAACCCAAGGCCTACTTCAAGGCTGACGAAGCTGCCCGAGCCGT GCCGAAGGTCAGTTTCTGAG
Downstream 100 bases:
>100_bases TTCCGGAGGCTGAAAACCAGGTGTCGCAAAGAGTTGAAAAAGGCTTTGAACTTTTCCGCAAATTGTTTTTTTACAAGGCA TTCCAACATAGCTATCCAAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 269; Mature: 269
Protein sequence:
>269_residues MDGHSKNHCSPVGRYFPMPLDRRFLPGWLAFLALLAICVFPLMAKAAGVPALVGRVNDYAGMISPQARSIIDQKLKALEA EDGTQVAVLTVPSLDGQPIEEFSIKVAEAWKIGQKGRDNGILFIVSKNDRAMRIEVGYGLEGRLTDLQAGRITRDVIKPA FKSGDYDKGFIDGVDAIVASVKGEYKAPKRKNDDGAPSPFLIFIILFVLFVASRFMRFFGGGGGPFGFGGPGGGFFPGGG FGGGGGSSDDGGFSGGGGDFGGGGASDNW
Sequences:
>Translated_269_residues MDGHSKNHCSPVGRYFPMPLDRRFLPGWLAFLALLAICVFPLMAKAAGVPALVGRVNDYAGMISPQARSIIDQKLKALEA EDGTQVAVLTVPSLDGQPIEEFSIKVAEAWKIGQKGRDNGILFIVSKNDRAMRIEVGYGLEGRLTDLQAGRITRDVIKPA FKSGDYDKGFIDGVDAIVASVKGEYKAPKRKNDDGAPSPFLIFIILFVLFVASRFMRFFGGGGGPFGFGGPGGGFFPGGG FGGGGGSSDDGGFSGGGGDFGGGGASDNW >Mature_269_residues MDGHSKNHCSPVGRYFPMPLDRRFLPGWLAFLALLAICVFPLMAKAAGVPALVGRVNDYAGMISPQARSIIDQKLKALEA EDGTQVAVLTVPSLDGQPIEEFSIKVAEAWKIGQKGRDNGILFIVSKNDRAMRIEVGYGLEGRLTDLQAGRITRDVIKPA FKSGDYDKGFIDGVDAIVASVKGEYKAPKRKNDDGAPSPFLIFIILFVLFVASRFMRFFGGGGGPFGFGGPGGGFFPGGG FGGGGGSSDDGGFSGGGGDFGGGGASDNW
Specific function: Unknown
COG id: COG1512
COG function: function code R; Beta-propeller domains of methanol dehydrogenase type
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0603 family [H]
Homologues:
Organism=Escherichia coli, GI87082161, Length=157, Percent_Identity=33.1210191082803, Blast_Score=105, Evalue=3e-24,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007621 [H]
Pfam domain/function: PF04536 DUF477 [H]
EC number: NA
Molecular weight: Translated: 28250; Mature: 28250
Theoretical pI: Translated: 8.19; Mature: 8.19
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDGHSKNHCSPVGRYFPMPLDRRFLPGWLAFLALLAICVFPLMAKAAGVPALVGRVNDYA CCCCCCCCCCHHHCCCCCCCCCHHCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH GMISPQARSIIDQKLKALEAEDGTQVAVLTVPSLDGQPIEEFSIKVAEAWKIGQKGRDNG CCCCHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHCCCCCCCCC ILFIVSKNDRAMRIEVGYGLEGRLTDLQAGRITRDVIKPAFKSGDYDKGFIDGVDAIVAS EEEEEECCCCEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHH VKGEYKAPKRKNDDGAPSPFLIFIILFVLFVASRFMRFFGGGGGPFGFGGPGGGFFPGGG HCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCC FGGGGGSSDDGGFSGGGGDFGGGGASDNW CCCCCCCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MDGHSKNHCSPVGRYFPMPLDRRFLPGWLAFLALLAICVFPLMAKAAGVPALVGRVNDYA CCCCCCCCCCHHHCCCCCCCCCHHCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH GMISPQARSIIDQKLKALEAEDGTQVAVLTVPSLDGQPIEEFSIKVAEAWKIGQKGRDNG CCCCHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHCCCCCCCCC ILFIVSKNDRAMRIEVGYGLEGRLTDLQAGRITRDVIKPAFKSGDYDKGFIDGVDAIVAS EEEEEECCCCEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHH VKGEYKAPKRKNDDGAPSPFLIFIILFVLFVASRFMRFFGGGGGPFGFGGPGGGFFPGGG HCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCC FGGGGGSSDDGGFSGGGGDFGGGGASDNW CCCCCCCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9278503 [H]