Definition Chlorobium tepidum TLS, complete genome.
Accession NC_002932
Length 2,154,946

Click here to switch to the map view.

The map label for this gene is ygcG [H]

Identifier: 21674604

GI number: 21674604

Start: 1695931

End: 1696740

Strand: Reverse

Name: ygcG [H]

Synonym: CT1790

Alternate gene names: 21674604

Gene position: 1696740-1695931 (Counterclockwise)

Preceding gene: 21674605

Following gene: 21674603

Centisome position: 78.74

GC content: 60.74

Gene sequence:

>810_bases
ATGGACGGTCATTCCAAAAATCACTGTTCGCCGGTTGGGCGTTATTTCCCGATGCCGCTCGACCGGCGTTTCCTGCCCGG
ATGGCTGGCGTTTCTCGCGCTGCTGGCGATCTGCGTTTTTCCGCTGATGGCAAAGGCCGCCGGTGTTCCGGCGCTTGTCG
GCAGGGTCAACGATTACGCCGGGATGATTTCGCCGCAGGCTCGCTCGATCATCGACCAGAAGCTCAAGGCGCTCGAAGCC
GAGGACGGCACGCAGGTTGCGGTGCTGACTGTGCCTTCGCTCGATGGCCAGCCCATCGAAGAGTTTTCGATCAAGGTGGC
CGAGGCGTGGAAGATCGGGCAAAAAGGGAGGGATAACGGCATTCTTTTCATCGTCTCGAAAAATGACCGGGCGATGAGAA
TCGAGGTTGGCTACGGCCTCGAAGGGCGCCTGACCGATCTTCAGGCGGGCCGGATTACCCGCGATGTCATCAAGCCGGCC
TTCAAAAGCGGCGATTACGACAAGGGGTTCATCGATGGCGTCGATGCCATTGTTGCCTCGGTCAAGGGGGAGTACAAAGC
GCCGAAAAGGAAAAACGATGATGGTGCGCCCTCTCCATTTCTGATTTTCATCATCCTTTTCGTGCTGTTTGTCGCGTCCC
GTTTCATGCGCTTTTTCGGTGGTGGCGGCGGACCTTTCGGCTTTGGCGGGCCGGGCGGCGGCTTTTTCCCCGGCGGCGGT
TTCGGCGGGGGAGGCGGCTCGTCCGACGACGGCGGCTTCAGTGGCGGCGGCGGTGATTTTGGCGGCGGCGGAGCGTCGGA
CAACTGGTAG

Upstream 100 bases:

>100_bases
CCGAACTCCCTGACCAACAGCTTGGTGCTCAAGCTCAAACCCAAGGCCTACTTCAAGGCTGACGAAGCTGCCCGAGCCGT
GCCGAAGGTCAGTTTCTGAG

Downstream 100 bases:

>100_bases
TTCCGGAGGCTGAAAACCAGGTGTCGCAAAGAGTTGAAAAAGGCTTTGAACTTTTCCGCAAATTGTTTTTTTACAAGGCA
TTCCAACATAGCTATCCAAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 269; Mature: 269

Protein sequence:

>269_residues
MDGHSKNHCSPVGRYFPMPLDRRFLPGWLAFLALLAICVFPLMAKAAGVPALVGRVNDYAGMISPQARSIIDQKLKALEA
EDGTQVAVLTVPSLDGQPIEEFSIKVAEAWKIGQKGRDNGILFIVSKNDRAMRIEVGYGLEGRLTDLQAGRITRDVIKPA
FKSGDYDKGFIDGVDAIVASVKGEYKAPKRKNDDGAPSPFLIFIILFVLFVASRFMRFFGGGGGPFGFGGPGGGFFPGGG
FGGGGGSSDDGGFSGGGGDFGGGGASDNW

Sequences:

>Translated_269_residues
MDGHSKNHCSPVGRYFPMPLDRRFLPGWLAFLALLAICVFPLMAKAAGVPALVGRVNDYAGMISPQARSIIDQKLKALEA
EDGTQVAVLTVPSLDGQPIEEFSIKVAEAWKIGQKGRDNGILFIVSKNDRAMRIEVGYGLEGRLTDLQAGRITRDVIKPA
FKSGDYDKGFIDGVDAIVASVKGEYKAPKRKNDDGAPSPFLIFIILFVLFVASRFMRFFGGGGGPFGFGGPGGGFFPGGG
FGGGGGSSDDGGFSGGGGDFGGGGASDNW
>Mature_269_residues
MDGHSKNHCSPVGRYFPMPLDRRFLPGWLAFLALLAICVFPLMAKAAGVPALVGRVNDYAGMISPQARSIIDQKLKALEA
EDGTQVAVLTVPSLDGQPIEEFSIKVAEAWKIGQKGRDNGILFIVSKNDRAMRIEVGYGLEGRLTDLQAGRITRDVIKPA
FKSGDYDKGFIDGVDAIVASVKGEYKAPKRKNDDGAPSPFLIFIILFVLFVASRFMRFFGGGGGPFGFGGPGGGFFPGGG
FGGGGGSSDDGGFSGGGGDFGGGGASDNW

Specific function: Unknown

COG id: COG1512

COG function: function code R; Beta-propeller domains of methanol dehydrogenase type

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0603 family [H]

Homologues:

Organism=Escherichia coli, GI87082161, Length=157, Percent_Identity=33.1210191082803, Blast_Score=105, Evalue=3e-24,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007621 [H]

Pfam domain/function: PF04536 DUF477 [H]

EC number: NA

Molecular weight: Translated: 28250; Mature: 28250

Theoretical pI: Translated: 8.19; Mature: 8.19

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDGHSKNHCSPVGRYFPMPLDRRFLPGWLAFLALLAICVFPLMAKAAGVPALVGRVNDYA
CCCCCCCCCCHHHCCCCCCCCCHHCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH
GMISPQARSIIDQKLKALEAEDGTQVAVLTVPSLDGQPIEEFSIKVAEAWKIGQKGRDNG
CCCCHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHCCCCCCCCC
ILFIVSKNDRAMRIEVGYGLEGRLTDLQAGRITRDVIKPAFKSGDYDKGFIDGVDAIVAS
EEEEEECCCCEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHH
VKGEYKAPKRKNDDGAPSPFLIFIILFVLFVASRFMRFFGGGGGPFGFGGPGGGFFPGGG
HCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCC
FGGGGGSSDDGGFSGGGGDFGGGGASDNW
CCCCCCCCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MDGHSKNHCSPVGRYFPMPLDRRFLPGWLAFLALLAICVFPLMAKAAGVPALVGRVNDYA
CCCCCCCCCCHHHCCCCCCCCCHHCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH
GMISPQARSIIDQKLKALEAEDGTQVAVLTVPSLDGQPIEEFSIKVAEAWKIGQKGRDNG
CCCCHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHCCCCCCCCC
ILFIVSKNDRAMRIEVGYGLEGRLTDLQAGRITRDVIKPAFKSGDYDKGFIDGVDAIVAS
EEEEEECCCCEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHH
VKGEYKAPKRKNDDGAPSPFLIFIILFVLFVASRFMRFFGGGGGPFGFGGPGGGFFPGGG
HCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCC
FGGGGGSSDDGGFSGGGGDFGGGGASDNW
CCCCCCCCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]