Click here to switch to the map view.

The map label for this gene is ideR [H]

Identifier: 21674552

GI number: 21674552

Start: 1649498

End: 1650313

Strand: Reverse

Name: ideR [H]

Synonym: CT1737

Alternate gene names: 21674552

Gene position: 1650313-1649498 (Counterclockwise)

Preceding gene: 21674553

Following gene: 21674550

Centisome position: 76.58

GC content: 62.87

Gene sequence:

>816_bases
GTGCTCAATCAGACCGTATCTGTCATGACGCGCAAAAGGAGCGGGATGACGGAGCGAACCAGCGGGGCCGTCGGCGGGAA
ACCGGAAAAGCTGAGCGAGTCGAGCGAGATGTACCTTCAGGTCATCTGGCGGTTGACTGAACGAGAGCGCGAGGTGTCGG
TGAGCGACATCGCCAAAGCGATAGGGCACTCGCTTTCGACCGTTTCCGAAAAAATCGTGCGACTGACGGAGGCCGGATTG
CTGCGTCACGAGTGGCGCGAAGGGGTGTCGATGACGCCGAAGGGGCGGCAAGCCGCCTGCCGGACTCTGAGAAAGCGGCG
GCTGGTCGAAACCTTTCTGTTCAAAATGGCCGGTTACGGCATTCACGAGCTGCACGAGGAGGCGTGCCGTCTGGAGCATG
TCATTTCGGATCGGCTCTCGGACGCGCTTGACCGGCTGCTTGGCTACCCGATGCACGATCCCCACGGCCACCCGATTCCG
GCGCATGACGGCGCGCTCAGGTCGGAGCTGCTTGAACCGCTCTCGACGGTCGATGAGGGGCGGACGGTTCGCATCGCGCA
GTTGCGGAGCGCCGATCCAGAAGTGCTCGAATATATCGCCCAGCTGGGTCTCTTGCCCGGCAGGAGTTGCACGGTTATGC
AAAAGGCCCCGTTTCAGGGACCGTTGACCATCGCCGATGGTTCGGAGCGCATTGCCATTGCCTTCGAGATCGCGTCGATC
ATCGATGTTCAGGCCGAGCCAGACGAGCGTTTCGACGAGGCTGGCGGCGGCCCGGAACCGTTCGCGCCGCCAGCCCGGCA
AAGCGCCGCTCAGTGA

Upstream 100 bases:

>100_bases
TCTCCTCCTCGAAAGCCTTGCGCGACGGGATGTTCGTCGGCCTCGCGCTCGATGCGGACAATCAGGAGCATTTGACGCGG
GAGCGGATTCGGCGCTGGGT

Downstream 100 bases:

>100_bases
GCGCGGCGCTCAGGCCTTGACGATGCACTCGGCGGGGCACACGGCAACACATGCCGGTGAGTCGGCATAGCCCTCGCACT
CGGTGCAGGCCGATTCATCG

Product: iron-dependent repressor

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 271; Mature: 271

Protein sequence:

>271_residues
MLNQTVSVMTRKRSGMTERTSGAVGGKPEKLSESSEMYLQVIWRLTEREREVSVSDIAKAIGHSLSTVSEKIVRLTEAGL
LRHEWREGVSMTPKGRQAACRTLRKRRLVETFLFKMAGYGIHELHEEACRLEHVISDRLSDALDRLLGYPMHDPHGHPIP
AHDGALRSELLEPLSTVDEGRTVRIAQLRSADPEVLEYIAQLGLLPGRSCTVMQKAPFQGPLTIADGSERIAIAFEIASI
IDVQAEPDERFDEAGGGPEPFAPPARQSAAQ

Sequences:

>Translated_271_residues
MLNQTVSVMTRKRSGMTERTSGAVGGKPEKLSESSEMYLQVIWRLTEREREVSVSDIAKAIGHSLSTVSEKIVRLTEAGL
LRHEWREGVSMTPKGRQAACRTLRKRRLVETFLFKMAGYGIHELHEEACRLEHVISDRLSDALDRLLGYPMHDPHGHPIP
AHDGALRSELLEPLSTVDEGRTVRIAQLRSADPEVLEYIAQLGLLPGRSCTVMQKAPFQGPLTIADGSERIAIAFEIASI
IDVQAEPDERFDEAGGGPEPFAPPARQSAAQ
>Mature_271_residues
MLNQTVSVMTRKRSGMTERTSGAVGGKPEKLSESSEMYLQVIWRLTEREREVSVSDIAKAIGHSLSTVSEKIVRLTEAGL
LRHEWREGVSMTPKGRQAACRTLRKRRLVETFLFKMAGYGIHELHEEACRLEHVISDRLSDALDRLLGYPMHDPHGHPIP
AHDGALRSELLEPLSTVDEGRTVRIAQLRSADPEVLEYIAQLGLLPGRSCTVMQKAPFQGPLTIADGSERIAIAFEIASI
IDVQAEPDERFDEAGGGPEPFAPPARQSAAQ

Specific function: Metal-dependent DNA-binding protein that controls transcription of many genes involved in iron metabolism [H]

COG id: COG1321

COG function: function code K; Mn-dependent transcriptional regulator

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH dtxR-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007167
- InterPro:   IPR001367
- InterPro:   IPR022689
- InterPro:   IPR022687
- InterPro:   IPR008988
- InterPro:   IPR011991 [H]

Pfam domain/function: PF02742 Fe_dep_repr_C; PF01325 Fe_dep_repress; PF04023 FeoA [H]

EC number: NA

Molecular weight: Translated: 29953; Mature: 29953

Theoretical pI: Translated: 6.43; Mature: 6.43

Prosite motif: PS50944 HTH_DTXR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLNQTVSVMTRKRSGMTERTSGAVGGKPEKLSESSEMYLQVIWRLTEREREVSVSDIAKA
CCCHHHHHHHHHHCCCCHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH
IGHSLSTVSEKIVRLTEAGLLRHEWREGVSMTPKGRQAACRTLRKRRLVETFLFKMAGYG
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCC
IHELHEEACRLEHVISDRLSDALDRLLGYPMHDPHGHPIPAHDGALRSELLEPLSTVDEG
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCC
RTVRIAQLRSADPEVLEYIAQLGLLPGRSCTVMQKAPFQGPLTIADGSERIAIAFEIASI
CEEEEHHHHCCCHHHHHHHHHHCCCCCCCEEEEECCCCCCCEEEECCCCEEEEEEEHHHH
IDVQAEPDERFDEAGGGPEPFAPPARQSAAQ
HHCCCCCHHHHHHCCCCCCCCCCCCHHCCCC
>Mature Secondary Structure
MLNQTVSVMTRKRSGMTERTSGAVGGKPEKLSESSEMYLQVIWRLTEREREVSVSDIAKA
CCCHHHHHHHHHHCCCCHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH
IGHSLSTVSEKIVRLTEAGLLRHEWREGVSMTPKGRQAACRTLRKRRLVETFLFKMAGYG
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCC
IHELHEEACRLEHVISDRLSDALDRLLGYPMHDPHGHPIPAHDGALRSELLEPLSTVDEG
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCC
RTVRIAQLRSADPEVLEYIAQLGLLPGRSCTVMQKAPFQGPLTIADGSERIAIAFEIASI
CEEEEHHHHCCCHHHHHHHHHHCCCCCCCEEEEECCCCCCCEEEECCCCEEEEEEEHHHH
IDVQAEPDERFDEAGGGPEPFAPPARQSAAQ
HHCCCCCHHHHHHCCCCCCCCCCCCHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12788972 [H]