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The map label for this gene is rsmI [H]

Identifier: 21674464

GI number: 21674464

Start: 1557633

End: 1558364

Strand: Direct

Name: rsmI [H]

Synonym: CT1646

Alternate gene names: 21674464

Gene position: 1557633-1558364 (Clockwise)

Preceding gene: 21674461

Following gene: 21674465

Centisome position: 72.28

GC content: 61.48

Gene sequence:

>732_bases
TTGAACTCCCGCGACGAACATAAAGGCACGCTCTACGTGGTGGCCACCCCGCTCGGCAATCTTGACGACATGACCTTTCG
GGCAGTCAACACGTTGCGCAATGCAGGAGCCATCGCCTGCGAGGACACCCGACGCACCTCGATTCTGCTCAAACACTTCG
GCATCGAGGGCAAGCGGCTGGTCAGCTACCACAGCTTCAACGAAGAGCGCGCCGTCCGGCAGGTAATCGAGCTGCTCGAA
GAGGGTTCGGACGTGGCGCTGGTGACCGACGCAGGCACACCCGCCATCAGCGATCCCGGCTACACGATGGCCAGCGCCGC
ACACGCCGCAGGACTGCCGGTGGTGCCGGTGCCGGGTGCGAGCGCGTTGACGGCGGCGCTCTCGGTCTGTCCGCTGCCAT
CGAGCAGCTTTTTCTTCGCCGGATTTTTGCCGCACAAGAAAGGGCGCAAAAGCCGCCTCGAATTTCTCGCCTCCATCGAC
AGCACCATCGTACTGTACGAATCGCCGCACCGGATCGGGCGGCTGATGGAGGAGGTGAAGGAGCACTTTCCCGACGCGCA
GGTGTTCGCCGCGCGAGAAATCACCAAGATGCACGAGGAGTACGTCACCGGCACGCCCGATGAACTGGCGAACCACTTCA
CCGGCCAGAAGCAGCGGGGCGAATTCGTCGTGGTCGTCCATCCGCCAGACAAACATTCAAAAAAGAGACAGGAACATGCA
GATCATCAATGA

Upstream 100 bases:

>100_bases
TCTGTTCACGCTGCATGGGCTTGCCTCAATCTGTTTCTCATAATTTTTACTATAATTATGGTCATAATATACAAGCTTCC
CGAATAAAGGCCACTGCTGA

Downstream 100 bases:

>100_bases
CCCCGCCGAGATGCAGAAGATCGCCGAAAAACTGCGTCTCCAGCACCAGTATATCGGCGTCGTCATGACGATGGGCGCGC
TGCACGAGGGGCACCTGAGT

Product: tetrapyrrole methylase family protein

Products: NA

Alternate protein names: 16S rRNA 2'-O-ribose C1402 methyltransferase; rRNA (cytidine-2'-O-)-methyltransferase RsmI [H]

Number of amino acids: Translated: 243; Mature: 243

Protein sequence:

>243_residues
MNSRDEHKGTLYVVATPLGNLDDMTFRAVNTLRNAGAIACEDTRRTSILLKHFGIEGKRLVSYHSFNEERAVRQVIELLE
EGSDVALVTDAGTPAISDPGYTMASAAHAAGLPVVPVPGASALTAALSVCPLPSSSFFFAGFLPHKKGRKSRLEFLASID
STIVLYESPHRIGRLMEEVKEHFPDAQVFAAREITKMHEEYVTGTPDELANHFTGQKQRGEFVVVVHPPDKHSKKRQEHA
DHQ

Sequences:

>Translated_243_residues
MNSRDEHKGTLYVVATPLGNLDDMTFRAVNTLRNAGAIACEDTRRTSILLKHFGIEGKRLVSYHSFNEERAVRQVIELLE
EGSDVALVTDAGTPAISDPGYTMASAAHAAGLPVVPVPGASALTAALSVCPLPSSSFFFAGFLPHKKGRKSRLEFLASID
STIVLYESPHRIGRLMEEVKEHFPDAQVFAAREITKMHEEYVTGTPDELANHFTGQKQRGEFVVVVHPPDKHSKKRQEHA
DHQ
>Mature_243_residues
MNSRDEHKGTLYVVATPLGNLDDMTFRAVNTLRNAGAIACEDTRRTSILLKHFGIEGKRLVSYHSFNEERAVRQVIELLE
EGSDVALVTDAGTPAISDPGYTMASAAHAAGLPVVPVPGASALTAALSVCPLPSSSFFFAGFLPHKKGRKSRLEFLASID
STIVLYESPHRIGRLMEEVKEHFPDAQVFAAREITKMHEEYVTGTPDELANHFTGQKQRGEFVVVVHPPDKHSKKRQEHA
DHQ

Specific function: Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA [H]

COG id: COG0313

COG function: function code R; Predicted methyltransferases

Gene ontology:

Cell location: Cytoplasm (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the methyltransferase superfamily. RsmI family [H]

Homologues:

Organism=Escherichia coli, GI1789535, Length=230, Percent_Identity=42.1739130434783, Blast_Score=167, Evalue=4e-43,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000878
- InterPro:   IPR014777
- InterPro:   IPR014776
- InterPro:   IPR008189
- InterPro:   IPR018063 [H]

Pfam domain/function: PF00590 TP_methylase [H]

EC number: NA

Molecular weight: Translated: 26725; Mature: 26725

Theoretical pI: Translated: 6.85; Mature: 6.85

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNSRDEHKGTLYVVATPLGNLDDMTFRAVNTLRNAGAIACEDTRRTSILLKHFGIEGKRL
CCCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHCCCEEECCCHHHHHHHHHCCCCCCEE
VSYHSFNEERAVRQVIELLEEGSDVALVTDAGTPAISDPGYTMASAAHAAGLPVVPVPGA
EEECCCCHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCHHHHHHHHCCCCEEECCCH
SALTAALSVCPLPSSSFFFAGFLPHKKGRKSRLEFLASIDSTIVLYESPHRIGRLMEEVK
HHHHHHHHHCCCCCCCCEEEECCCCCCCHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHH
EHFPDAQVFAAREITKMHEEYVTGTPDELANHFTGQKQRGEFVVVVHPPDKHSKKRQEHA
HHCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCEEEEECCCCCHHHHHHHHC
DHQ
CCC
>Mature Secondary Structure
MNSRDEHKGTLYVVATPLGNLDDMTFRAVNTLRNAGAIACEDTRRTSILLKHFGIEGKRL
CCCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHCCCEEECCCHHHHHHHHHCCCCCCEE
VSYHSFNEERAVRQVIELLEEGSDVALVTDAGTPAISDPGYTMASAAHAAGLPVVPVPGA
EEECCCCHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCHHHHHHHHCCCCEEECCCH
SALTAALSVCPLPSSSFFFAGFLPHKKGRKSRLEFLASIDSTIVLYESPHRIGRLMEEVK
HHHHHHHHHCCCCCCCCEEEECCCCCCCHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHH
EHFPDAQVFAAREITKMHEEYVTGTPDELANHFTGQKQRGEFVVVVHPPDKHSKKRQEHA
HHCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCEEEEECCCCCHHHHHHHHC
DHQ
CCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11058132 [H]