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The map label for this gene is pscC

Identifier: 21674457

GI number: 21674457

Start: 1548200

End: 1548820

Strand: Reverse

Name: pscC

Synonym: CT1639

Alternate gene names: 21674457

Gene position: 1548820-1548200 (Counterclockwise)

Preceding gene: 21674460

Following gene: 21674455

Centisome position: 71.87

GC content: 52.17

Gene sequence:

>621_bases
ATGGACAAAAATTCAAACGGTAAGCTTATTGCTCTCGCAGTAGGCGGGGCTGTCTTAATGGGAGCTTTGTTTTTTTCGGT
ATCTTTCTTGACCGGCTACATCCCGGCGCCGAATCACTCAGCCATCCTCACTCCTTTGAGGTCGTTTATGGGTTGGTTTC
TCCTCATTTTCTGCGCTTCAATCATTATCATGGGCCTCGGCAAGATGTCCAGTGCGATCAGCGACAAGTGGTTCCTGAGC
TTTCCGCTGAGCATTTTTGTGATCGTCATGGTGATGTTTTTAAGCCTCAGGGTTTACTGGGAGAAAGGCCGCACCACCAC
TGTGGATGGCAAGTACATCCGCACGACTGCTGAACTCAAAGAGTTCCTCAACAAACCCGCCGCGACGAGCGATGTGCCTC
CGGCGCCAGCAGGATTCGACTTTGATGCCGCAAAAAAGCTGGTTGATGTGCGCTGCAACAAGTGCCACACGCTTGATTCC
GTCGCAGACCTTTTCCGTACCAAGTACAAGAAGACTGGGCAGGTCAACCTGATCGTCAAGCGTATGCAGGGCTTCCCCGG
TTCCGGTATCAGTGACGACGATGCCAAGACCATCGGCATCTGGCTCCACGAGAAGTTCTGA

Upstream 100 bases:

>100_bases
TTGACGCTTTTTAGGCTTAAATGTTTGCCCCCTTTGCCAATAATGTTTATCTTTCTCAATAAATTCTTGAAAGCGGCTAA
CACCTAATCCATTACCTGTC

Downstream 100 bases:

>100_bases
TTCCGATCGGAATGAACAACAGAGGTTTTCTTTCAGAAGCGCCCCGGAAATCCGGGGCGTTCTGCATTGGACAGGTTACT
CTTTGCTCTTGCTGTAGCTG

Product: photosystem P840 reaction center cytochrome c-551

Products: NA

Alternate protein names: Photosystem P840 reaction center cytochrome c-551

Number of amino acids: Translated: 206; Mature: 206

Protein sequence:

>206_residues
MDKNSNGKLIALAVGGAVLMGALFFSVSFLTGYIPAPNHSAILTPLRSFMGWFLLIFCASIIIMGLGKMSSAISDKWFLS
FPLSIFVIVMVMFLSLRVYWEKGRTTTVDGKYIRTTAELKEFLNKPAATSDVPPAPAGFDFDAAKKLVDVRCNKCHTLDS
VADLFRTKYKKTGQVNLIVKRMQGFPGSGISDDDAKTIGIWLHEKF

Sequences:

>Translated_206_residues
MDKNSNGKLIALAVGGAVLMGALFFSVSFLTGYIPAPNHSAILTPLRSFMGWFLLIFCASIIIMGLGKMSSAISDKWFLS
FPLSIFVIVMVMFLSLRVYWEKGRTTTVDGKYIRTTAELKEFLNKPAATSDVPPAPAGFDFDAAKKLVDVRCNKCHTLDS
VADLFRTKYKKTGQVNLIVKRMQGFPGSGISDDDAKTIGIWLHEKF
>Mature_206_residues
MDKNSNGKLIALAVGGAVLMGALFFSVSFLTGYIPAPNHSAILTPLRSFMGWFLLIFCASIIIMGLGKMSSAISDKWFLS
FPLSIFVIVMVMFLSLRVYWEKGRTTTVDGKYIRTTAELKEFLNKPAATSDVPPAPAGFDFDAAKKLVDVRCNKCHTLDS
VADLFRTKYKKTGQVNLIVKRMQGFPGSGISDDDAKTIGIWLHEKF

Specific function: Monoheme cytochrome which is the immediate electron donor to P840 of the photosynthetic reaction center complex

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Probable)

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): CY551_CHLTE (O07091)

Other databases:

- EMBL:   AB004460
- EMBL:   AF287481
- EMBL:   AE006470
- RefSeq:   NP_662522.1
- PDB:   3A9F
- PDBsum:   3A9F
- GeneID:   1006127
- GenomeReviews:   AE006470_GR
- KEGG:   cte:CT1639
- NMPDR:   fig|194439.1.peg.1616
- TIGR:   CT1639
- HOGENOM:   HBG405706
- OMA:   CNKCHTL
- ProtClustDB:   CLSK637867
- BioCyc:   CTEP194439:CT_1639-MONOMER
- GO:   GO:0015979
- GO:   GO:0006810
- InterPro:   IPR016203
- InterPro:   IPR009056
- InterPro:   IPR019604
- PIRSF:   PIRSF000009

Pfam domain/function: PF10643 Cytochrome-c551; SSF46626 Cytochrome_c

EC number: NA

Molecular weight: Translated: 22715; Mature: 22715

Theoretical pI: Translated: 10.00; Mature: 10.00

Prosite motif: PS51007 CYTC

Important sites: BINDING 152-152 BINDING 155-155

Signals:

None

Transmembrane regions:

HASH(0xb7bd594)-; HASH(0xf27cbf4)-; HASH(0xf1964ac)-;

Cys/Met content:

1.5 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
5.3 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
5.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDKNSNGKLIALAVGGAVLMGALFFSVSFLTGYIPAPNHSAILTPLRSFMGWFLLIFCAS
CCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHH
IIIMGLGKMSSAISDKWFLSFPLSIFVIVMVMFLSLRVYWEKGRTTTVDGKYIRTTAELK
HHHHHHHHHHHHHCCCHHHHCCHHHHHHHHHHHHHHHHHHHCCCEEEECCHHHHHHHHHH
EFLNKPAATSDVPPAPAGFDFDAAKKLVDVRCNKCHTLDSVADLFRTKYKKTGQVNLIVK
HHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCHHHHHH
RMQGFPGSGISDDDAKTIGIWLHEKF
HHCCCCCCCCCCCCCCEEEEEEEECH
>Mature Secondary Structure
MDKNSNGKLIALAVGGAVLMGALFFSVSFLTGYIPAPNHSAILTPLRSFMGWFLLIFCAS
CCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHH
IIIMGLGKMSSAISDKWFLSFPLSIFVIVMVMFLSLRVYWEKGRTTTVDGKYIRTTAELK
HHHHHHHHHHHHHCCCHHHHCCHHHHHHHHHHHHHHHHHHHCCCEEEECCHHHHHHHHHH
EFLNKPAATSDVPPAPAGFDFDAAKKLVDVRCNKCHTLDSVADLFRTKYKKTGQVNLIVK
HHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCHHHHHH
RMQGFPGSGISDDDAKTIGIWLHEKF
HHCCCCCCCCCCCCCCEEEEEEEECH

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9230061; 10976061; 12093901