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The map label for this gene is psd

Identifier: 21674433

GI number: 21674433

Start: 1521184

End: 1521834

Strand: Direct

Name: psd

Synonym: CT1615

Alternate gene names: 21674433

Gene position: 1521184-1521834 (Clockwise)

Preceding gene: 21674431

Following gene: 21674434

Centisome position: 70.59

GC content: 55.76

Gene sequence:

>651_bases
ATGCGCATTGCACCATACGGAACCGGCAGCGTCGTCAAAACCGCCATTTTCTGCTTCGTCATTTTCATCACAGCTCTTTT
TCTACCGCAACCCGGAGGCGTGATTCTTGCCACCGCGGCGCTCGGTTTTCTGCTGTTCACACTTTATTTCTATCGCGATC
CCGAACGCAAAATTCCTGACGGAAAAGGCCTCGTCATCGCTCCCGCCGACGGAAAAATCGTGCTGAAACAAACGCTCGAC
CACCCGGTTACCGGGCCGGGTTCGACGCTCGTCAGCATCTTCATGTCGCCATTCAACGTCCACGTGAACCGGATTCCCGT
CGATGGTCTGGTGCGCGATCTGCGCTACCATGAGGGCAAATTTCTGATGGCCTTCGACCATCGCAGCATGACAGACAACG
AGCGGATGGAGATCACACTCGACACCGCCGCTGGCCCCCTCTGGTTCTGCCAGGTTTCGGGATTCGTTGCCCGCAGGATC
GTCTGCGATCTTGAAGCTGGCCAGGAGGTGGCCTCCGGCAAACGATTCGGCATGATAAAGCTCGGATCGAGAGTTGACAT
TGTCCTCCCCTCCTCGATACAGATCAAGGTTAAGGAGGGGATGAAAACCACCGCAGGCGAAACAATTTTGGGCCAGACCG
GAGGTTTTTGA

Upstream 100 bases:

>100_bases
CCGTTTTTGCAATCCCGACAACGGCCTGCCGACCGGGTGCAATGATGGTAAATAAGACAAATTTGGCTATCATAAAGCCT
GAAATCAGGATTATAAGCTC

Downstream 100 bases:

>100_bases
TCGAAAACTTTTTGGTTTCAAGACCTTCTTTGTTAAGTTTTCATTGCAATCACACACAGTCTACCAGCGCCATGAAACAG
TAATCGCTCAATTGCAGCGC

Product: phosphatidylserine decarboxylase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 216; Mature: 216

Protein sequence:

>216_residues
MRIAPYGTGSVVKTAIFCFVIFITALFLPQPGGVILATAALGFLLFTLYFYRDPERKIPDGKGLVIAPADGKIVLKQTLD
HPVTGPGSTLVSIFMSPFNVHVNRIPVDGLVRDLRYHEGKFLMAFDHRSMTDNERMEITLDTAAGPLWFCQVSGFVARRI
VCDLEAGQEVASGKRFGMIKLGSRVDIVLPSSIQIKVKEGMKTTAGETILGQTGGF

Sequences:

>Translated_216_residues
MRIAPYGTGSVVKTAIFCFVIFITALFLPQPGGVILATAALGFLLFTLYFYRDPERKIPDGKGLVIAPADGKIVLKQTLD
HPVTGPGSTLVSIFMSPFNVHVNRIPVDGLVRDLRYHEGKFLMAFDHRSMTDNERMEITLDTAAGPLWFCQVSGFVARRI
VCDLEAGQEVASGKRFGMIKLGSRVDIVLPSSIQIKVKEGMKTTAGETILGQTGGF
>Mature_216_residues
MRIAPYGTGSVVKTAIFCFVIFITALFLPQPGGVILATAALGFLLFTLYFYRDPERKIPDGKGLVIAPADGKIVLKQTLD
HPVTGPGSTLVSIFMSPFNVHVNRIPVDGLVRDLRYHEGKFLMAFDHRSMTDNERMEITLDTAAGPLWFCQVSGFVARRI
VCDLEAGQEVASGKRFGMIKLGSRVDIVLPSSIQIKVKEGMKTTAGETILGQTGGF

Specific function: Unknown

COG id: COG0688

COG function: function code I; Phosphatidylserine decarboxylase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the phosphatidylserine decarboxylase family. Type 3 subfamily

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): PSD_CHLTE (Q93SU4)

Other databases:

- EMBL:   AY005137
- EMBL:   AE006470
- RefSeq:   NP_662498.1
- GeneID:   1006156
- GenomeReviews:   AE006470_GR
- KEGG:   cte:CT1615
- NMPDR:   fig|194439.1.peg.1592
- TIGR:   CT1615
- HOGENOM:   HBG541103
- OMA:   IFMSVFN
- ProtClustDB:   PRK05305
- BioCyc:   CTEP194439:CT_1615-MONOMER
- BRENDA:   4.1.1.65
- HAMAP:   MF_00664
- InterPro:   IPR003817
- InterPro:   IPR004428
- TIGRFAMs:   TIGR00164

Pfam domain/function: PF02666 PS_Dcarbxylase

EC number: =4.1.1.65

Molecular weight: Translated: 23537; Mature: 23537

Theoretical pI: Translated: 9.20; Mature: 9.20

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRIAPYGTGSVVKTAIFCFVIFITALFLPQPGGVILATAALGFLLFTLYFYRDPERKIPD
CEECCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEHHHHHHHHHHHHHHHCCCCCCCCC
GKGLVIAPADGKIVLKQTLDHPVTGPGSTLVSIFMSPFNVHVNRIPVDGLVRDLRYHEGK
CCCEEEECCCCCEEEEECCCCCCCCCCHHHHHHHHCCCEEEEEEECHHHHHHHHHHCCCC
FLMAFDHRSMTDNERMEITLDTAAGPLWFCQVSGFVARRIVCDLEAGQEVASGKRFGMIK
EEEEECCCCCCCCCEEEEEEECCCCCEEEEEHHHHHHHHHEEECCCCHHHHCCCCEEEEE
LGSRVDIVLPSSIQIKVKEGMKTTAGETILGQTGGF
ECCEEEEEECCCEEEEECCCCCCCCCCEEECCCCCC
>Mature Secondary Structure
MRIAPYGTGSVVKTAIFCFVIFITALFLPQPGGVILATAALGFLLFTLYFYRDPERKIPD
CEECCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEHHHHHHHHHHHHHHHCCCCCCCCC
GKGLVIAPADGKIVLKQTLDHPVTGPGSTLVSIFMSPFNVHVNRIPVDGLVRDLRYHEGK
CCCEEEECCCCCEEEEECCCCCCCCCCHHHHHHHHCCCEEEEEEECHHHHHHHHHHCCCC
FLMAFDHRSMTDNERMEITLDTAAGPLWFCQVSGFVARRIVCDLEAGQEVASGKRFGMIK
EEEEECCCCCCCCCEEEEEEECCCCCEEEEEHHHHHHHHHEEECCCCHHHHCCCCEEEEE
LGSRVDIVLPSSIQIKVKEGMKTTAGETILGQTGGF
ECCEEEEEECCCEEEEECCCCCCCCCCEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10976061; 12093901