| Definition | Chlorobium tepidum TLS, complete genome. |
|---|---|
| Accession | NC_002932 |
| Length | 2,154,946 |
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The map label for this gene is 21674412
Identifier: 21674412
GI number: 21674412
Start: 1502523
End: 1503113
Strand: Direct
Name: 21674412
Synonym: CT1594
Alternate gene names: NA
Gene position: 1502523-1503113 (Clockwise)
Preceding gene: 21674411
Following gene: 21674414
Centisome position: 69.72
GC content: 53.47
Gene sequence:
>591_bases ATGAGCCGATCTTCCGGAAATACTCCTCATTATCGCCACCGTTCATTATCTTGCGCTATTTCAAATTGTTCAACCGTCAC ACCAACATCAAGCACTCTCATGTCAACGTCACCGACCATTGCCGCGCTTCTCGACGAATCGATACAGCTCGAACTCAATC TCGCCAAACTCTACACCCTCTTCAACGACCATTTCGAAGAGGACGAAGAGTTCTGGTGGCAACTCTCGATGGAGGAGCGC AGCCATGCGGCCTTGCTCCAGCAGGAGAAAAAACAGCCGCAGCCGTTGCAGTTTTTTCCGGAAAATCTCCTTGCCAAAGA CCTCGACGCCCTGAAAGCGAACAATGCACGCATCATCGCCGAAACGGAGCGATTTGCCATTTCGCCGTTCTCAAGGGAAG AAGCACTGAACCTCGCGCTCCACATCGAAATGTCCGCCGGAGAGGCACACTTCCAGGAGTTCATGGAGAGCGAAACCGGC TCGCTGACCGCCGACCTCTTGCAGCAGCTCGCCAGCGAAGATCAGAACCACGCCAAGCGCATCCGCGAGTATATGAAAGA GCAGGGCGTGAAGGAAAAAAAGCAAGCCTGA
Upstream 100 bases:
>100_bases CACCAGCCGCCATGCGCGTGACCAGCGGCGATGGCCGCATCGAGCGCACTGCGGTCCACGCCGGTCTGCCCGCCAGAAAC GATCATCGACAAGCCGCCGC
Downstream 100 bases:
>100_bases AAATCGCCAGCTCGCCGAGCCAGGGGAAGCGTGATGCGGACTTTGTGGACAAAACCCGCGAAGAATCGCTCTTCATTCTT CTTCGTCAACAAAATCCACC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 196; Mature: 195
Protein sequence:
>196_residues MSRSSGNTPHYRHRSLSCAISNCSTVTPTSSTLMSTSPTIAALLDESIQLELNLAKLYTLFNDHFEEDEEFWWQLSMEER SHAALLQQEKKQPQPLQFFPENLLAKDLDALKANNARIIAETERFAISPFSREEALNLALHIEMSAGEAHFQEFMESETG SLTADLLQQLASEDQNHAKRIREYMKEQGVKEKKQA
Sequences:
>Translated_196_residues MSRSSGNTPHYRHRSLSCAISNCSTVTPTSSTLMSTSPTIAALLDESIQLELNLAKLYTLFNDHFEEDEEFWWQLSMEER SHAALLQQEKKQPQPLQFFPENLLAKDLDALKANNARIIAETERFAISPFSREEALNLALHIEMSAGEAHFQEFMESETG SLTADLLQQLASEDQNHAKRIREYMKEQGVKEKKQA >Mature_195_residues SRSSGNTPHYRHRSLSCAISNCSTVTPTSSTLMSTSPTIAALLDESIQLELNLAKLYTLFNDHFEEDEEFWWQLSMEERS HAALLQQEKKQPQPLQFFPENLLAKDLDALKANNARIIAETERFAISPFSREEALNLALHIEMSAGEAHFQEFMESETGS LTADLLQQLASEDQNHAKRIREYMKEQGVKEKKQA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22316; Mature: 22185
Theoretical pI: Translated: 4.86; Mature: 4.86
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSRSSGNTPHYRHRSLSCAISNCSTVTPTSSTLMSTSPTIAALLDESIQLELNLAKLYTL CCCCCCCCCCHHHHHHHEECCCCCCCCCCCCHHHCCCCHHHHHHCCHHEEEEHHHHHHHH FNDHFEEDEEFWWQLSMEERSHAALLQQEKKQPQPLQFFPENLLAKDLDALKANNARIIA HHHHCCCCHHHHEEECHHHHHHHHHHHHHHCCCCCHHHCHHHHHHHHHHHHHCCCCEEEE ETERFAISPFSREEALNLALHIEMSAGEAHFQEFMESETGSLTADLLQQLASEDQNHAKR ECCCEEECCCCHHHHEEEEEEEEECCCHHHHHHHHHCCCCCHHHHHHHHHHHCCHHHHHH IREYMKEQGVKEKKQA HHHHHHHCCCHHHHCC >Mature Secondary Structure SRSSGNTPHYRHRSLSCAISNCSTVTPTSSTLMSTSPTIAALLDESIQLELNLAKLYTL CCCCCCCCCHHHHHHHEECCCCCCCCCCCCHHHCCCCHHHHHHCCHHEEEEHHHHHHHH FNDHFEEDEEFWWQLSMEERSHAALLQQEKKQPQPLQFFPENLLAKDLDALKANNARIIA HHHHCCCCHHHHEEECHHHHHHHHHHHHHHCCCCCHHHCHHHHHHHHHHHHHCCCCEEEE ETERFAISPFSREEALNLALHIEMSAGEAHFQEFMESETGSLTADLLQQLASEDQNHAKR ECCCEEECCCCHHHHEEEEEEEEECCCHHHHHHHHHCCCCCHHHHHHHHHHHCCHHHHHH IREYMKEQGVKEKKQA HHHHHHHCCCHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA