| Definition | Chlorobium tepidum TLS, complete genome. |
|---|---|
| Accession | NC_002932 |
| Length | 2,154,946 |
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The map label for this gene is pabA [H]
Identifier: 21674383
GI number: 21674383
Start: 1474949
End: 1475512
Strand: Reverse
Name: pabA [H]
Synonym: CT1565
Alternate gene names: 21674383
Gene position: 1475512-1474949 (Counterclockwise)
Preceding gene: 21674384
Following gene: 21674382
Centisome position: 68.47
GC content: 59.4
Gene sequence:
>564_bases ATGATTCTTGTTATAGACAATTACGACTCGTTTACGTACAACCTTGTCCAGTACATCGGCGAACTTGGGGCTGAGGTCGC GGTGTACCGGAACGACGAACTGACCGTCGAGCAGGCGCTGGCGCTTGAGCCGGAGAAGATCGTCATCTCTCCGGGGCCGG GTACGCCTGCGGATGCCGGAATCTCCATTCCGCTCATCAACGTCGTCAAGGGCAACATTCCGCTCTTCGGCGTCTGCCTC GGCCATCAGGCCATCGGCGAAGCGCTCGGCGGCAAGGTCGTTCGCGCCGGGCAGATCATGCACGGCAAGACCTCGCAGAT TTATCACGACGGCAAAGGGGTGTTCCGCGGCCTTCCCAATCCCTTTACGGCGACCCGCTACCACTCGCTCGTCGTGGAGC GCGAAAGCCTGCCAGCAGAGCTTGAAATCACGGCATGGACTGAAGACGGCGTCATCATGGGTCTCCAGTCCAGCGAACTT GGCCTGTACGGCGTGCAGTTCCATCCCGAATCGATCATGACCTCGGTCGGCCACGACCTCATCAGGAACTTCCTTGAACT CTGA
Upstream 100 bases:
>100_bases TATGCCTTGAAGTCTGCCAGCGGAGCCGACGAATATCGATGCAGCGGGTTTTGGGAAAAATTCTTTTAAGTCTTTGAAAA TTAGTGTTTTACGCGCTTTC
Downstream 100 bases:
>100_bases GCGCAGCATGGCAGACCAGGAGTGCAAAAAACCGGGCTGGGCCGTTCCGCCGCCGAAGCCCTTCTCTTCCGAAGAGATTT CGCTCCTGCCGGGCAGCGAG
Product: anthranilate synthase component II
Products: NA
Alternate protein names: Glutamine amido-transferase [H]
Number of amino acids: Translated: 187; Mature: 187
Protein sequence:
>187_residues MILVIDNYDSFTYNLVQYIGELGAEVAVYRNDELTVEQALALEPEKIVISPGPGTPADAGISIPLINVVKGNIPLFGVCL GHQAIGEALGGKVVRAGQIMHGKTSQIYHDGKGVFRGLPNPFTATRYHSLVVERESLPAELEITAWTEDGVIMGLQSSEL GLYGVQFHPESIMTSVGHDLIRNFLEL
Sequences:
>Translated_187_residues MILVIDNYDSFTYNLVQYIGELGAEVAVYRNDELTVEQALALEPEKIVISPGPGTPADAGISIPLINVVKGNIPLFGVCL GHQAIGEALGGKVVRAGQIMHGKTSQIYHDGKGVFRGLPNPFTATRYHSLVVERESLPAELEITAWTEDGVIMGLQSSEL GLYGVQFHPESIMTSVGHDLIRNFLEL >Mature_187_residues MILVIDNYDSFTYNLVQYIGELGAEVAVYRNDELTVEQALALEPEKIVISPGPGTPADAGISIPLINVVKGNIPLFGVCL GHQAIGEALGGKVVRAGQIMHGKTSQIYHDGKGVFRGLPNPFTATRYHSLVVERESLPAELEITAWTEDGVIMGLQSSEL GLYGVQFHPESIMTSVGHDLIRNFLEL
Specific function: Catalyzes The Biosynthesis Of 4-Amino-4-Deoxychorismate (Adc) From Chorismate And Glutamine. [C]
COG id: COG0512
COG function: function code EH; Anthranilate/para-aminobenzoate synthases component II
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 glutamine amidotransferase type-1 domain [H]
Homologues:
Organism=Homo sapiens, GI18105007, Length=175, Percent_Identity=30.8571428571429, Blast_Score=68, Evalue=4e-12, Organism=Escherichia coli, GI1789760, Length=186, Percent_Identity=62.3655913978495, Blast_Score=244, Evalue=2e-66, Organism=Escherichia coli, GI1787517, Length=187, Percent_Identity=43.8502673796791, Blast_Score=155, Evalue=2e-39, Organism=Escherichia coli, GI1786215, Length=161, Percent_Identity=31.6770186335404, Blast_Score=72, Evalue=3e-14, Organism=Escherichia coli, GI1788854, Length=191, Percent_Identity=26.1780104712042, Blast_Score=66, Evalue=2e-12, Organism=Saccharomyces cerevisiae, GI6322638, Length=187, Percent_Identity=50.2673796791444, Blast_Score=202, Evalue=3e-53, Organism=Saccharomyces cerevisiae, GI6324361, Length=210, Percent_Identity=33.8095238095238, Blast_Score=97, Evalue=2e-21,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006220 - InterPro: IPR001317 - InterPro: IPR011702 - InterPro: IPR017926 - InterPro: IPR000991 - InterPro: IPR006221 [H]
Pfam domain/function: PF00117 GATase [H]
EC number: =4.1.3.27 [H]
Molecular weight: Translated: 20258; Mature: 20258
Theoretical pI: Translated: 4.58; Mature: 4.58
Prosite motif: PS00442 GATASE_TYPE_I
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MILVIDNYDSFTYNLVQYIGELGAEVAVYRNDELTVEQALALEPEKIVISPGPGTPADAG CEEEEECCCCHHHHHHHHHHHCCCEEEEEECCCCCCHHHHCCCCCEEEEECCCCCCCCCC ISIPLINVVKGNIPLFGVCLGHQAIGEALGGKVVRAGQIMHGKTSQIYHDGKGVFRGLPN CEEEEEEEEECCCCEEEEEECHHHHHHHHCCCEEECCEEECCCCCCEEECCCHHCCCCCC PFTATRYHSLVVERESLPAELEITAWTEDGVIMGLQSSELGLYGVQFHPESIMTSVGHDL CCCHHHHHEEEEECCCCCCEEEEEEEECCCEEEEECCCCCEEEEEEECHHHHHHHHHHHH IRNFLEL HHHHHCC >Mature Secondary Structure MILVIDNYDSFTYNLVQYIGELGAEVAVYRNDELTVEQALALEPEKIVISPGPGTPADAG CEEEEECCCCHHHHHHHHHHHCCCEEEEEECCCCCCHHHHCCCCCEEEEECCCCCCCCCC ISIPLINVVKGNIPLFGVCLGHQAIGEALGGKVVRAGQIMHGKTSQIYHDGKGVFRGLPN CEEEEEEEEECCCCEEEEEECHHHHHHHHCCCEEECCEEECCCCCCEEECCCHHCCCCCC PFTATRYHSLVVERESLPAELEITAWTEDGVIMGLQSSELGLYGVQFHPESIMTSVGHDL CCCHHHHHEEEEECCCCCCEEEEEEEECCCEEEEECCCCCEEEEEEECHHHHHHHHHHHH IRNFLEL HHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 2105306; 10984043 [H]