Definition Chlorobium tepidum TLS, complete genome.
Accession NC_002932
Length 2,154,946

Click here to switch to the map view.

The map label for this gene is 21674324

Identifier: 21674324

GI number: 21674324

Start: 1411769

End: 1412206

Strand: Direct

Name: 21674324

Synonym: CT1504

Alternate gene names: NA

Gene position: 1411769-1412206 (Clockwise)

Preceding gene: 21674321

Following gene: 21674325

Centisome position: 65.51

GC content: 56.16

Gene sequence:

>438_bases
ATGGACTTTCACGCTCTTCTGCGCGTCATACACATCACGGCCTTCGCCGCCTGGTTCGGCACGATCTTCGCAACCCTTTT
TCTGCTGAAAACGCTCGAACCCGGCCTGACCGGCGAGAAAAAGCAGGCCGAAGAGTACTCGCTGCTCCTGCGCCGTTTCA
TCAAGCTCGAAACGAAGGTGGCCGACGTGGCGGTCATTTCGGTGCTGCTTTCCGGCCTGCTCCTCGCGCACTTTTACGAA
GGATGGCATCCGTGGGTCTTTGTCAAGATAGGCCTGATGATCCTCCAGATCGCCCTCACAATGGGCTACATCATCAAGGC
AATCCAGCCCATCACCTACCCCTGCGACACTGCGAAATATCGCGCCTGGTACCGGCTTTTCACCATCTCGTTCAGCATGT
TCGGCATCGTGCTGCTCGTAACATTTTTTCTGCGCTGA

Upstream 100 bases:

>100_bases
GCGGCAATAAATATACAAGTCCGCAAGAAAGCTTGAAAAGCTCTGAGCAACTCCATATTTTGGATTACCATTTTATCCGG
CAATCAACCATCGTTCTCTC

Downstream 100 bases:

>100_bases
ACATCTCTGTGAAAGATCAGGGTAACGATTTGAAAAACAGTTTCTTTCTTGTATATTCTTGCTCTTTATCACCAAACTAT
TACTAATGATGCAGGCGCTG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 145; Mature: 145

Protein sequence:

>145_residues
MDFHALLRVIHITAFAAWFGTIFATLFLLKTLEPGLTGEKKQAEEYSLLLRRFIKLETKVADVAVISVLLSGLLLAHFYE
GWHPWVFVKIGLMILQIALTMGYIIKAIQPITYPCDTAKYRAWYRLFTISFSMFGIVLLVTFFLR

Sequences:

>Translated_145_residues
MDFHALLRVIHITAFAAWFGTIFATLFLLKTLEPGLTGEKKQAEEYSLLLRRFIKLETKVADVAVISVLLSGLLLAHFYE
GWHPWVFVKIGLMILQIALTMGYIIKAIQPITYPCDTAKYRAWYRLFTISFSMFGIVLLVTFFLR
>Mature_145_residues
MDFHALLRVIHITAFAAWFGTIFATLFLLKTLEPGLTGEKKQAEEYSLLLRRFIKLETKVADVAVISVLLSGLLLAHFYE
GWHPWVFVKIGLMILQIALTMGYIIKAIQPITYPCDTAKYRAWYRLFTISFSMFGIVLLVTFFLR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16694; Mature: 16694

Theoretical pI: Translated: 9.87; Mature: 9.87

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDFHALLRVIHITAFAAWFGTIFATLFLLKTLEPGLTGEKKQAEEYSLLLRRFIKLETKV
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHH
ADVAVISVLLSGLLLAHFYEGWHPWVFVKIGLMILQIALTMGYIIKAIQPITYPCDTAKY
HHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHH
RAWYRLFTISFSMFGIVLLVTFFLR
HHHHHHHHHHHHHHHHHHHHHHHHC
>Mature Secondary Structure
MDFHALLRVIHITAFAAWFGTIFATLFLLKTLEPGLTGEKKQAEEYSLLLRRFIKLETKV
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHH
ADVAVISVLLSGLLLAHFYEGWHPWVFVKIGLMILQIALTMGYIIKAIQPITYPCDTAKY
HHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHH
RAWYRLFTISFSMFGIVLLVTFFLR
HHHHHHHHHHHHHHHHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA