| Definition | Chlorobium tepidum TLS, complete genome. |
|---|---|
| Accession | NC_002932 |
| Length | 2,154,946 |
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The map label for this gene is 21674324
Identifier: 21674324
GI number: 21674324
Start: 1411769
End: 1412206
Strand: Direct
Name: 21674324
Synonym: CT1504
Alternate gene names: NA
Gene position: 1411769-1412206 (Clockwise)
Preceding gene: 21674321
Following gene: 21674325
Centisome position: 65.51
GC content: 56.16
Gene sequence:
>438_bases ATGGACTTTCACGCTCTTCTGCGCGTCATACACATCACGGCCTTCGCCGCCTGGTTCGGCACGATCTTCGCAACCCTTTT TCTGCTGAAAACGCTCGAACCCGGCCTGACCGGCGAGAAAAAGCAGGCCGAAGAGTACTCGCTGCTCCTGCGCCGTTTCA TCAAGCTCGAAACGAAGGTGGCCGACGTGGCGGTCATTTCGGTGCTGCTTTCCGGCCTGCTCCTCGCGCACTTTTACGAA GGATGGCATCCGTGGGTCTTTGTCAAGATAGGCCTGATGATCCTCCAGATCGCCCTCACAATGGGCTACATCATCAAGGC AATCCAGCCCATCACCTACCCCTGCGACACTGCGAAATATCGCGCCTGGTACCGGCTTTTCACCATCTCGTTCAGCATGT TCGGCATCGTGCTGCTCGTAACATTTTTTCTGCGCTGA
Upstream 100 bases:
>100_bases GCGGCAATAAATATACAAGTCCGCAAGAAAGCTTGAAAAGCTCTGAGCAACTCCATATTTTGGATTACCATTTTATCCGG CAATCAACCATCGTTCTCTC
Downstream 100 bases:
>100_bases ACATCTCTGTGAAAGATCAGGGTAACGATTTGAAAAACAGTTTCTTTCTTGTATATTCTTGCTCTTTATCACCAAACTAT TACTAATGATGCAGGCGCTG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 145; Mature: 145
Protein sequence:
>145_residues MDFHALLRVIHITAFAAWFGTIFATLFLLKTLEPGLTGEKKQAEEYSLLLRRFIKLETKVADVAVISVLLSGLLLAHFYE GWHPWVFVKIGLMILQIALTMGYIIKAIQPITYPCDTAKYRAWYRLFTISFSMFGIVLLVTFFLR
Sequences:
>Translated_145_residues MDFHALLRVIHITAFAAWFGTIFATLFLLKTLEPGLTGEKKQAEEYSLLLRRFIKLETKVADVAVISVLLSGLLLAHFYE GWHPWVFVKIGLMILQIALTMGYIIKAIQPITYPCDTAKYRAWYRLFTISFSMFGIVLLVTFFLR >Mature_145_residues MDFHALLRVIHITAFAAWFGTIFATLFLLKTLEPGLTGEKKQAEEYSLLLRRFIKLETKVADVAVISVLLSGLLLAHFYE GWHPWVFVKIGLMILQIALTMGYIIKAIQPITYPCDTAKYRAWYRLFTISFSMFGIVLLVTFFLR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16694; Mature: 16694
Theoretical pI: Translated: 9.87; Mature: 9.87
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDFHALLRVIHITAFAAWFGTIFATLFLLKTLEPGLTGEKKQAEEYSLLLRRFIKLETKV CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHH ADVAVISVLLSGLLLAHFYEGWHPWVFVKIGLMILQIALTMGYIIKAIQPITYPCDTAKY HHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHH RAWYRLFTISFSMFGIVLLVTFFLR HHHHHHHHHHHHHHHHHHHHHHHHC >Mature Secondary Structure MDFHALLRVIHITAFAAWFGTIFATLFLLKTLEPGLTGEKKQAEEYSLLLRRFIKLETKV CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHH ADVAVISVLLSGLLLAHFYEGWHPWVFVKIGLMILQIALTMGYIIKAIQPITYPCDTAKY HHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHH RAWYRLFTISFSMFGIVLLVTFFLR HHHHHHHHHHHHHHHHHHHHHHHHC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA