| Definition | Chlorobium tepidum TLS, complete genome. |
|---|---|
| Accession | NC_002932 |
| Length | 2,154,946 |
Click here to switch to the map view.
The map label for this gene is 21674309
Identifier: 21674309
GI number: 21674309
Start: 1393781
End: 1394551
Strand: Direct
Name: 21674309
Synonym: CT1489
Alternate gene names: NA
Gene position: 1393781-1394551 (Clockwise)
Preceding gene: 21674308
Following gene: 21674311
Centisome position: 64.68
GC content: 56.55
Gene sequence:
>771_bases TTGCCAAACACCAGCAACCGATTGCCTCCGATGAGACGACTATTCAGCGTTCTTCCCGCCCTGCTCATCCTGATCCTCGC CATTCCGTCGAGTGTACATGCCGCGTTCACCGGCGAGATGGATATGAAGCTCACCATGCCTAACGGCAAGGCGGACATCA CCTATCTCTTCGGCGTACGCGATCAAAAGATGGAGATGACCATGATGCTCGACCGGATTCCGGAGCCACTCAGAACAACC GTCATCACCCGCCGCTCCACGCCCGACGAGGCAATCATCGTCAATCACAAGTCGAAAAGCTGGAGCATTGTGAACCTGCG AAGCGCAGCCGAGAGCGCCACCTTGCTCGACTTCGACAGCAACTACCGCTTCACGCGCGTCGGCCTGGAAACCGTCAAGG GCTACCCGTGCGAACACGTTCGGCTAACCAGCTCAACCGATACGCTCGACCTCTGGATGACGAAAGGGCTTGCCGACTTC TCGACCTTCCGGCTCCTGCAATCGCAGAACCCTCGTCTGTCGAACACCTCGCTCGCGCGCGTGCTCAAACAGAACGGTGT CGATGGTTTTCCGGCCAAAATCGTCCAGAAGAACGGCAACGGGCTTTATATCATGCAAATGCAAAAGGTCATGCCAAAGC CGACTCCAGAATCGAGCTTCCGGGTTCCGGCGGGCTACCGGCAAACCGAACCCAACCAGATCAACATCGACAAGCGGCAG AAAGAGCACCTGCGCCAGCTCATGGAGAAGATGAAAAAATTCGAAGAGTGA
Upstream 100 bases:
>100_bases AGGGCGAATACGCAGGTCTGCCTCTACAAAAAGAAACGCCTCAAAATAACGTCGAAAAAGAGGCAAGCAGTTCTTTCCTC CTCCGTTTTTTTGCGATATT
Downstream 100 bases:
>100_bases ACGGTTCCGGCTGAACGATGTTATCTGCTTTCATTTCATTACTTTTACAAATCGCATTGGTGCGCGGGCTCGCCACCGCC GTATTTTCCTACAATTCAAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 256; Mature: 255
Protein sequence:
>256_residues MPNTSNRLPPMRRLFSVLPALLILILAIPSSVHAAFTGEMDMKLTMPNGKADITYLFGVRDQKMEMTMMLDRIPEPLRTT VITRRSTPDEAIIVNHKSKSWSIVNLRSAAESATLLDFDSNYRFTRVGLETVKGYPCEHVRLTSSTDTLDLWMTKGLADF STFRLLQSQNPRLSNTSLARVLKQNGVDGFPAKIVQKNGNGLYIMQMQKVMPKPTPESSFRVPAGYRQTEPNQINIDKRQ KEHLRQLMEKMKKFEE
Sequences:
>Translated_256_residues MPNTSNRLPPMRRLFSVLPALLILILAIPSSVHAAFTGEMDMKLTMPNGKADITYLFGVRDQKMEMTMMLDRIPEPLRTT VITRRSTPDEAIIVNHKSKSWSIVNLRSAAESATLLDFDSNYRFTRVGLETVKGYPCEHVRLTSSTDTLDLWMTKGLADF STFRLLQSQNPRLSNTSLARVLKQNGVDGFPAKIVQKNGNGLYIMQMQKVMPKPTPESSFRVPAGYRQTEPNQINIDKRQ KEHLRQLMEKMKKFEE >Mature_255_residues PNTSNRLPPMRRLFSVLPALLILILAIPSSVHAAFTGEMDMKLTMPNGKADITYLFGVRDQKMEMTMMLDRIPEPLRTTV ITRRSTPDEAIIVNHKSKSWSIVNLRSAAESATLLDFDSNYRFTRVGLETVKGYPCEHVRLTSSTDTLDLWMTKGLADFS TFRLLQSQNPRLSNTSLARVLKQNGVDGFPAKIVQKNGNGLYIMQMQKVMPKPTPESSFRVPAGYRQTEPNQINIDKRQK EHLRQLMEKMKKFEE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29190; Mature: 29059
Theoretical pI: Translated: 10.46; Mature: 10.46
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 5.9 %Met (Translated Protein) 6.2 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 5.5 %Met (Mature Protein) 5.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPNTSNRLPPMRRLFSVLPALLILILAIPSSVHAAFTGEMDMKLTMPNGKADITYLFGVR CCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCEEEEECCCCCCEEEEEECCC DQKMEMTMMLDRIPEPLRTTVITRRSTPDEAIIVNHKSKSWSIVNLRSAAESATLLDFDS CCHHHHHHHHHHCCCCHHHHEEEECCCCCCEEEEECCCCCEEEEEECCCCCCCEEEEECC NYRFTRVGLETVKGYPCEHVRLTSSTDTLDLWMTKGLADFSTFRLLQSQNPRLSNTSLAR CCEEEEECHHHHCCCCCCEEEEECCCCCCHHHHHCCCHHHHHHHHHHCCCCCCCHHHHHH VLKQNGVDGFPAKIVQKNGNGLYIMQMQKVMPKPTPESSFRVPAGYRQTEPNQINIDKRQ HHHHCCCCCCCCEEEEECCCEEEEEEEHHHCCCCCCCCCEECCCCCCCCCCCEECCCHHH KEHLRQLMEKMKKFEE HHHHHHHHHHHHHHCC >Mature Secondary Structure PNTSNRLPPMRRLFSVLPALLILILAIPSSVHAAFTGEMDMKLTMPNGKADITYLFGVR CCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCEEEEECCCCCCEEEEEECCC DQKMEMTMMLDRIPEPLRTTVITRRSTPDEAIIVNHKSKSWSIVNLRSAAESATLLDFDS CCHHHHHHHHHHCCCCHHHHEEEECCCCCCEEEEECCCCCEEEEEECCCCCCCEEEEECC NYRFTRVGLETVKGYPCEHVRLTSSTDTLDLWMTKGLADFSTFRLLQSQNPRLSNTSLAR CCEEEEECHHHHCCCCCCEEEEECCCCCCHHHHHCCCHHHHHHHHHHCCCCCCCHHHHHH VLKQNGVDGFPAKIVQKNGNGLYIMQMQKVMPKPTPESSFRVPAGYRQTEPNQINIDKRQ HHHHCCCCCCCCEEEEECCCEEEEEEEHHHCCCCCCCCCEECCCCCCCCCCCEECCCHHH KEHLRQLMEKMKKFEE HHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA