| Definition | Chlorobium tepidum TLS, complete genome. |
|---|---|
| Accession | NC_002932 |
| Length | 2,154,946 |
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The map label for this gene is 21674302
Identifier: 21674302
GI number: 21674302
Start: 1388058
End: 1388531
Strand: Direct
Name: 21674302
Synonym: CT1482
Alternate gene names: NA
Gene position: 1388058-1388531 (Clockwise)
Preceding gene: 21674300
Following gene: 21674303
Centisome position: 64.41
GC content: 55.27
Gene sequence:
>474_bases ATGACCAGCACCATCGACACGCCAAAAAAGGTCATTATCCTGTATGACAGCATGGCCGTCGGTGGTTCTGCGGACAGGCT GATTGATGCTATCGGCAGAAATCTTGCCCAGGCCGGAGCGTATGTGGAAAAAGCCCGCTGCAAGCCCAACGCGGACTACA GCTTCGTCGAAGAGTTCGATCTCGTAATTCTCGGCGCGCCGATTTACTATCTGCTCGTCGCCTCGAAACTGAGTGGTTCG CTCTCGCAGAGCAACCTGAGAACCGTCCTCAAAGGCAAAAAAGTGGCGCTCTTCGTCATCTGCGGCAGCCCGGAGCCGAT GGCGCAGTTCCTCTACCTGCCGCAACTCAAAATGCATCTCGACAACCCGGTGATCCTTGCCGAAAAAGTGTTCGCTCCCG CAGAGACCAGCGATCAGAACGCGATCACAGAGTTCACGAAAAACATTCTGGATGCCTACGGCAAGGCACGCTGA
Upstream 100 bases:
>100_bases GGTTGATCAGCTTGGCCCCTCCCGATTTTGCCGTGAAAAAGTAATGTCTTATTATTAAACTACATTTCGGAGTCAGGCTC AATTCTAAACGCCAACACCC
Downstream 100 bases:
>100_bases TTCAACAAAACGTACTCTATGACTCCTGACAACGAACGCCAGATGAGAGCCATTATCCTCTATGACAGCCGTTCCACTGG CGGTTCAACCGACAAACTGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 157; Mature: 156
Protein sequence:
>157_residues MTSTIDTPKKVIILYDSMAVGGSADRLIDAIGRNLAQAGAYVEKARCKPNADYSFVEEFDLVILGAPIYYLLVASKLSGS LSQSNLRTVLKGKKVALFVICGSPEPMAQFLYLPQLKMHLDNPVILAEKVFAPAETSDQNAITEFTKNILDAYGKAR
Sequences:
>Translated_157_residues MTSTIDTPKKVIILYDSMAVGGSADRLIDAIGRNLAQAGAYVEKARCKPNADYSFVEEFDLVILGAPIYYLLVASKLSGS LSQSNLRTVLKGKKVALFVICGSPEPMAQFLYLPQLKMHLDNPVILAEKVFAPAETSDQNAITEFTKNILDAYGKAR >Mature_156_residues TSTIDTPKKVIILYDSMAVGGSADRLIDAIGRNLAQAGAYVEKARCKPNADYSFVEEFDLVILGAPIYYLLVASKLSGSL SQSNLRTVLKGKKVALFVICGSPEPMAQFLYLPQLKMHLDNPVILAEKVFAPAETSDQNAITEFTKNILDAYGKAR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17103; Mature: 16972
Theoretical pI: Translated: 8.17; Mature: 8.17
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTSTIDTPKKVIILYDSMAVGGSADRLIDAIGRNLAQAGAYVEKARCKPNADYSFVEEFD CCCCCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHCC LVILGAPIYYLLVASKLSGSLSQSNLRTVLKGKKVALFVICGSPEPMAQFLYLPQLKMHL EEEECCHHHHHHHHHHHCCCCCHHHHHHHHCCCEEEEEEEECCCCHHHHHHHCCHHHHHC DNPVILAEKVFAPAETSDQNAITEFTKNILDAYGKAR CCCEEEHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCC >Mature Secondary Structure TSTIDTPKKVIILYDSMAVGGSADRLIDAIGRNLAQAGAYVEKARCKPNADYSFVEEFD CCCCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHCC LVILGAPIYYLLVASKLSGSLSQSNLRTVLKGKKVALFVICGSPEPMAQFLYLPQLKMHL EEEECCHHHHHHHHHHHCCCCCHHHHHHHHCCCEEEEEEEECCCCHHHHHHHCCHHHHHC DNPVILAEKVFAPAETSDQNAITEFTKNILDAYGKAR CCCEEEHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA