| Definition | Chlorobium tepidum TLS, complete genome. |
|---|---|
| Accession | NC_002932 |
| Length | 2,154,946 |
Click here to switch to the map view.
The map label for this gene is 21674295
Identifier: 21674295
GI number: 21674295
Start: 1381861
End: 1383171
Strand: Direct
Name: 21674295
Synonym: CT1475
Alternate gene names: NA
Gene position: 1381861-1383171 (Clockwise)
Preceding gene: 21674294
Following gene: 21674296
Centisome position: 64.13
GC content: 62.55
Gene sequence:
>1311_bases ATGACCAACTCCACCCCCAACGCAAAAATAGGCCCCATCGAGCTTGCCGCTTCCGTCATGCCGCGCCATGCATGGACATT CCTGTTCGCATCGTTCTTTTCGATCGGCATGGTCACCTTTGTCTCCATCGGGCAGGCCTACATTCTCAACGAGCATCTCG GCATTCCGGTCTCGGAGCAGGGCACCATCAGCGGAGACCTGGTCTTCTGGACAGAGATCGTGACGCTCTTGCTCTTCGGC CCGGCAGGAGCGATCATGGACCGCATCGGCAGGCGTCCGGTCTATGCCGTCGGCTTCATCATTCTGGCCATTGCCTACCT CTACTACCCGCTCGTGACCAACGTGTTCCAGCTCACCATCGCCCGCATGATCTACGCGGTCGGCGTGGTGGCCGTCACCA GCGGACTGGCGACGGTACTGGTCGATTATCCGAAGGAGCGCTCGCGGGGCAAGCTCATCGCGGTGGTCGGATTCCTGAAT GGACTCGGCATCGTCATCCTGAACCAGTTCTTCGGCGGCCTGCCCAAGAGGCTCGTGGCGAACGGCATGAGCGGCACGGA GGCCGGATTCTGGATGCACGCGACCATCGCGGGCACGGCGGCACTGACGGCTATCGTGCTCTTCTTCGGCCTCAAGGGCG GCACACCGGTGCGACACGAGGAGCGCCCGCCAATCAGGAAGCTGCTCACCAGCGGCTTCCGCCACGCCCGCAACCCGAAG ATTCTGCTCTCCTACGCGGCGGCCTTCGTGGCACGCGGCGACCAGTCGATCATCGGCACCTTCGTGCCGCTCTGGGGCAT GACCACCGGCCTGGCGATGGGCCTCGAACCAGCCGAGGCGGTCAAAAAAGGCACCTTCATCTTCATCATTTCGCAAGCCG CCGCGCTGCTCTGGGCGCCGGTCATCGGCGTTTTCCTCGACCGCTGGAACCGCGTCACGGCGCTGACGATCTGCATGGGT CTGGCCGCCATCGGCTACCTCTCTCTGGCGATGATCGGCAACCCTCTCGAAACGTACTCGCTCATCTTCTTCGTGCTGCT CGGCATCGGCCAGATCAGCGCTTTCCTTGGCTCGCAATCGCTCATCGGTCAGGAAGCCCCGAAAGAAGCCCGCGGCTCGG TCATCGGAGCCTTCAACATCAGCGGAGCCATCGGCATCCTCTTCATCACCACCACCGGAGGCCGCCTCTTCGACGGCATG AGCCCCAAAGCCCCCTTCATTATCGTCGGCGCAGTGAATCTGCTTGTGATGCTCGGCGGTATGTGGCTGCGGACGCGGGA GGTGAAGGAGAGGGGAAAATTTGCGGCATGA
Upstream 100 bases:
>100_bases AAGGGAGAATACGCGGGTTCGCCCTGAAAACGACAAACCACTAAAAATCGGGTTATCTGATAACTGCATCGTCAACCCAA TCCACCGCACTTCCATCCTG
Downstream 100 bases:
>100_bases CAAAAAAACTGTCTTGTCATGCTGAGTGAAGAGAAGCATCCCGTTTGGATTGATCGCCGCAGAATCGAATGATGAACAAG CCGAAACACTTGGCGCGAGT
Product: transporter, putative
Products: NA
Alternate protein names: Facilitator Transporter; Transporter Facilitator Family; Facilitator Superfamily Permease; Ferric Reductase Domain-Containing Protein
Number of amino acids: Translated: 436; Mature: 435
Protein sequence:
>436_residues MTNSTPNAKIGPIELAASVMPRHAWTFLFASFFSIGMVTFVSIGQAYILNEHLGIPVSEQGTISGDLVFWTEIVTLLLFG PAGAIMDRIGRRPVYAVGFIILAIAYLYYPLVTNVFQLTIARMIYAVGVVAVTSGLATVLVDYPKERSRGKLIAVVGFLN GLGIVILNQFFGGLPKRLVANGMSGTEAGFWMHATIAGTAALTAIVLFFGLKGGTPVRHEERPPIRKLLTSGFRHARNPK ILLSYAAAFVARGDQSIIGTFVPLWGMTTGLAMGLEPAEAVKKGTFIFIISQAAALLWAPVIGVFLDRWNRVTALTICMG LAAIGYLSLAMIGNPLETYSLIFFVLLGIGQISAFLGSQSLIGQEAPKEARGSVIGAFNISGAIGILFITTTGGRLFDGM SPKAPFIIVGAVNLLVMLGGMWLRTREVKERGKFAA
Sequences:
>Translated_436_residues MTNSTPNAKIGPIELAASVMPRHAWTFLFASFFSIGMVTFVSIGQAYILNEHLGIPVSEQGTISGDLVFWTEIVTLLLFG PAGAIMDRIGRRPVYAVGFIILAIAYLYYPLVTNVFQLTIARMIYAVGVVAVTSGLATVLVDYPKERSRGKLIAVVGFLN GLGIVILNQFFGGLPKRLVANGMSGTEAGFWMHATIAGTAALTAIVLFFGLKGGTPVRHEERPPIRKLLTSGFRHARNPK ILLSYAAAFVARGDQSIIGTFVPLWGMTTGLAMGLEPAEAVKKGTFIFIISQAAALLWAPVIGVFLDRWNRVTALTICMG LAAIGYLSLAMIGNPLETYSLIFFVLLGIGQISAFLGSQSLIGQEAPKEARGSVIGAFNISGAIGILFITTTGGRLFDGM SPKAPFIIVGAVNLLVMLGGMWLRTREVKERGKFAA >Mature_435_residues TNSTPNAKIGPIELAASVMPRHAWTFLFASFFSIGMVTFVSIGQAYILNEHLGIPVSEQGTISGDLVFWTEIVTLLLFGP AGAIMDRIGRRPVYAVGFIILAIAYLYYPLVTNVFQLTIARMIYAVGVVAVTSGLATVLVDYPKERSRGKLIAVVGFLNG LGIVILNQFFGGLPKRLVANGMSGTEAGFWMHATIAGTAALTAIVLFFGLKGGTPVRHEERPPIRKLLTSGFRHARNPKI LLSYAAAFVARGDQSIIGTFVPLWGMTTGLAMGLEPAEAVKKGTFIFIISQAAALLWAPVIGVFLDRWNRVTALTICMGL AAIGYLSLAMIGNPLETYSLIFFVLLGIGQISAFLGSQSLIGQEAPKEARGSVIGAFNISGAIGILFITTTGGRLFDGMS PKAPFIIVGAVNLLVMLGGMWLRTREVKERGKFAA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 46622; Mature: 46491
Theoretical pI: Translated: 10.44; Mature: 10.44
Prosite motif: PS50850 MFS ; PS00216 SUGAR_TRANSPORT_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTNSTPNAKIGPIELAASVMPRHAWTFLFASFFSIGMVTFVSIGQAYILNEHLGIPVSEQ CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHEECCCCCCCCCCC GTISGDLVFWTEIVTLLLFGPAGAIMDRIGRRPVYAVGFIILAIAYLYYPLVTNVFQLTI CCCCCCHHHHHHHHHHHHHCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH ARMIYAVGVVAVTSGLATVLVDYPKERSRGKLIAVVGFLNGLGIVILNQFFGGLPKRLVA HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEHHHHCHHHHHHHHHHCCCCHHHHH NGMSGTEAGFWMHATIAGTAALTAIVLFFGLKGGTPVRHEERPPIRKLLTSGFRHARNPK CCCCCCCCCEEEEEHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHCCCCH ILLSYAAAFVARGDQSIIGTFVPLWGMTTGLAMGLEPAEAVKKGTFIFIISQAAALLWAP HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCEEEEHHHHHHHHHHH VIGVFLDRWNRVTALTICMGLAAIGYLSLAMIGNPLETYSLIFFVLLGIGQISAFLGSQS HHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCHH LIGQEAPKEARGSVIGAFNISGAIGILFITTTGGRLFDGMSPKAPFIIVGAVNLLVMLGG HHCCCCCHHHCCCEEEEEECCCCEEEEEEEECCCHHCCCCCCCCCEEEEHHHHHHHHHCC MWLRTREVKERGKFAA HHHHHHHHHHCCCCCC >Mature Secondary Structure TNSTPNAKIGPIELAASVMPRHAWTFLFASFFSIGMVTFVSIGQAYILNEHLGIPVSEQ CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHEECCCCCCCCCCC GTISGDLVFWTEIVTLLLFGPAGAIMDRIGRRPVYAVGFIILAIAYLYYPLVTNVFQLTI CCCCCCHHHHHHHHHHHHHCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH ARMIYAVGVVAVTSGLATVLVDYPKERSRGKLIAVVGFLNGLGIVILNQFFGGLPKRLVA HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEHHHHCHHHHHHHHHHCCCCHHHHH NGMSGTEAGFWMHATIAGTAALTAIVLFFGLKGGTPVRHEERPPIRKLLTSGFRHARNPK CCCCCCCCCEEEEEHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHCCCCH ILLSYAAAFVARGDQSIIGTFVPLWGMTTGLAMGLEPAEAVKKGTFIFIISQAAALLWAP HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCEEEEHHHHHHHHHHH VIGVFLDRWNRVTALTICMGLAAIGYLSLAMIGNPLETYSLIFFVLLGIGQISAFLGSQS HHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCHH LIGQEAPKEARGSVIGAFNISGAIGILFITTTGGRLFDGMSPKAPFIIVGAVNLLVMLGG HHCCCCCHHHCCCEEEEEECCCCEEEEEEEECCCHHCCCCCCCCCEEEEHHHHHHHHHCC MWLRTREVKERGKFAA HHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA