| Definition | Chlorobium tepidum TLS, complete genome. |
|---|---|
| Accession | NC_002932 |
| Length | 2,154,946 |
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The map label for this gene is 21674284
Identifier: 21674284
GI number: 21674284
Start: 1369836
End: 1371431
Strand: Direct
Name: 21674284
Synonym: CT1463
Alternate gene names: NA
Gene position: 1369836-1371431 (Clockwise)
Preceding gene: 21674282
Following gene: 21674285
Centisome position: 63.57
GC content: 55.58
Gene sequence:
>1596_bases TTGCCGACATCCATCGGGCAAAAAGGCAAGATGAAAAAAGCGCTGCTCATCACCGGCCTTGTGGCCAGCCTGCTGGCTGT ACTTGGTTTGTGGCTGCACCGCAGCTATACGATCCTCAAAACGAAGCCTCCCGCCCCCCTGACCACCGACGTCAAACTCG AACAGCCGTCATCGCTGTTCAACCTGCCCATCAGCATCGAACATACGGTACTGGCGGACTATCTGAACGGCAAGATTCGC GGCAATTTCCTGAACGCCGACCTGTGGTTGCAGAAAAAGCACAAAGAGCGCGTCAGTCTCGCATTGACAAGAGAAGAAAA CATCACCATCAGCTCGAACGGGCATAAGCTCTTCTGCACCTTTCCGGTCTCGGCAGAAGCACGGCTTACTGACAGCCGCT TCGGCAAGTTTCTCGCAAAACTGCTCGTCTGGCCGATCCATGCCAAAGCGGTCGTCACCTTCTCGACACCAATCGCGCTC GATCGCAACTGGCATCTCAAGACTCGTTTCAAAATCGAAAATATCAGGTGGGAAGAGGAGCCTGTGTTGAAAATAGGGCC GTTCCGGAAACACATCAGGGCTGACGTCGACACCCTGCTCAGCGACAACAAACGCGGCCTGACCGCCCTGCTCGACGCCG AAATCGACAAGGAGGCCAGCCTTTACCCCACCGTTAGCGATGTCTGGAAAGATTTGCAGAAACCCATCGTGCTCACCCGA AAGCCTGTTCCCGTCTGGCTGCGCTTCCACTGCAACGACATCACCGGCCATATTTCACTGAACAAGAGGGCCATCGTCTG CAACGCCCGTATCATGACAAACATGAGGATGCTGACCGACACGACCGCCATCAGCCCGCCAACGCCTTTGCCCCGATTCC GGCAAACTCCCCGAGACAGCATCTCGACCATCTCCGATGTCAACTTCTACGCCCTGGTGCCCTTCGCCAGCATCAACAGA AACCTCAATGATGTCTTCATGAACCGGCGCTTCAGCCGCTCCGGATACGACATCGTCGTACGCAGCGTCGAAGCATACGG CTCGTCAAGCGGGCTTTCGGTAGCCATCATGACAGACCTCGACCTGAAAAGCCATATCGTCATAAGCGGTCGTCCGCGCT ATGACATACCGACCCACACCCTCAGCATCGACCATTTTGACTACTCCATCGACACTGGCAACCCGATCATCAGAACAAGA GAACTCATTCTGCACGATGCCATCCGAGACAGCATCAGCACCCGGCTCGATGTGCAGATCGGCTCGTTGGTCGACCGGCT GCCGACAATCATCACCAGAGCCGTATCCAAAGCCAAAGCGGGCAGAACCATCGATCTGACCATCGACAGCCTCGCCATCC GCAAATGCGATATCCGCGTCGGAAGAAACAACATCTATCTTCTGGTCAACGCCACCGCGAAAAATGCCCTGCGCATCAAG CGGATCAAATCCGGCAAGGTCATCAGAATCCGCAAACAAGCCGAAACAAAGGATCAAAACCCCACCAGTCAGCTCCCCCG GCCTCCAGACACAGACAACAAATCCCGATTGTTACCGGTCACGGCGCGCCCGTTGCAGCTCACCAATCACTTCTGA
Upstream 100 bases:
>100_bases CGAATCCAGTCGCGCGCATACCGAAACGCCGCGGCCATTTTGAAGCCGCAGTGAGAATCGGTATTATGCTTTTGACAATA CTCAATGAGTTCACCCGTTT
Downstream 100 bases:
>100_bases ACCGCCGCGTCATACTTTCCATTGAAAAATTCCCGGAGAGAAGCTTTAACTCTTATTCTGAAAAGACCACAAAATTGTAC TGGCACTATCAAGAGGTAAC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 531; Mature: 530
Protein sequence:
>531_residues MPTSIGQKGKMKKALLITGLVASLLAVLGLWLHRSYTILKTKPPAPLTTDVKLEQPSSLFNLPISIEHTVLADYLNGKIR GNFLNADLWLQKKHKERVSLALTREENITISSNGHKLFCTFPVSAEARLTDSRFGKFLAKLLVWPIHAKAVVTFSTPIAL DRNWHLKTRFKIENIRWEEEPVLKIGPFRKHIRADVDTLLSDNKRGLTALLDAEIDKEASLYPTVSDVWKDLQKPIVLTR KPVPVWLRFHCNDITGHISLNKRAIVCNARIMTNMRMLTDTTAISPPTPLPRFRQTPRDSISTISDVNFYALVPFASINR NLNDVFMNRRFSRSGYDIVVRSVEAYGSSSGLSVAIMTDLDLKSHIVISGRPRYDIPTHTLSIDHFDYSIDTGNPIIRTR ELILHDAIRDSISTRLDVQIGSLVDRLPTIITRAVSKAKAGRTIDLTIDSLAIRKCDIRVGRNNIYLLVNATAKNALRIK RIKSGKVIRIRKQAETKDQNPTSQLPRPPDTDNKSRLLPVTARPLQLTNHF
Sequences:
>Translated_531_residues MPTSIGQKGKMKKALLITGLVASLLAVLGLWLHRSYTILKTKPPAPLTTDVKLEQPSSLFNLPISIEHTVLADYLNGKIR GNFLNADLWLQKKHKERVSLALTREENITISSNGHKLFCTFPVSAEARLTDSRFGKFLAKLLVWPIHAKAVVTFSTPIAL DRNWHLKTRFKIENIRWEEEPVLKIGPFRKHIRADVDTLLSDNKRGLTALLDAEIDKEASLYPTVSDVWKDLQKPIVLTR KPVPVWLRFHCNDITGHISLNKRAIVCNARIMTNMRMLTDTTAISPPTPLPRFRQTPRDSISTISDVNFYALVPFASINR NLNDVFMNRRFSRSGYDIVVRSVEAYGSSSGLSVAIMTDLDLKSHIVISGRPRYDIPTHTLSIDHFDYSIDTGNPIIRTR ELILHDAIRDSISTRLDVQIGSLVDRLPTIITRAVSKAKAGRTIDLTIDSLAIRKCDIRVGRNNIYLLVNATAKNALRIK RIKSGKVIRIRKQAETKDQNPTSQLPRPPDTDNKSRLLPVTARPLQLTNHF >Mature_530_residues PTSIGQKGKMKKALLITGLVASLLAVLGLWLHRSYTILKTKPPAPLTTDVKLEQPSSLFNLPISIEHTVLADYLNGKIRG NFLNADLWLQKKHKERVSLALTREENITISSNGHKLFCTFPVSAEARLTDSRFGKFLAKLLVWPIHAKAVVTFSTPIALD RNWHLKTRFKIENIRWEEEPVLKIGPFRKHIRADVDTLLSDNKRGLTALLDAEIDKEASLYPTVSDVWKDLQKPIVLTRK PVPVWLRFHCNDITGHISLNKRAIVCNARIMTNMRMLTDTTAISPPTPLPRFRQTPRDSISTISDVNFYALVPFASINRN LNDVFMNRRFSRSGYDIVVRSVEAYGSSSGLSVAIMTDLDLKSHIVISGRPRYDIPTHTLSIDHFDYSIDTGNPIIRTRE LILHDAIRDSISTRLDVQIGSLVDRLPTIITRAVSKAKAGRTIDLTIDSLAIRKCDIRVGRNNIYLLVNATAKNALRIKR IKSGKVIRIRKQAETKDQNPTSQLPRPPDTDNKSRLLPVTARPLQLTNHF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 59933; Mature: 59801
Theoretical pI: Translated: 10.79; Mature: 10.79
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPTSIGQKGKMKKALLITGLVASLLAVLGLWLHRSYTILKTKPPAPLTTDVKLEQPSSLF CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCEEEEEECCCCCCEECEEECCCCCCE NLPISIEHTVLADYLNGKIRGNFLNADLWLQKKHKERVSLALTREENITISSNGHKLFCT ECCEEECHHHHHHHHCCEEEEEEECCEEEEEHHCCCEEEEEEEECCCEEEECCCCEEEEE FPVSAEARLTDSRFGKFLAKLLVWPIHAKAVVTFSTPIALDRNWHLKTRFKIENIRWEEE ECCCCCCCCCHHHHHHHHHHHHHCCCCCEEEEEEECCEEECCCCEEEEEEEEECCCCCCC PVLKIGPFRKHIRADVDTLLSDNKRGLTALLDAEIDKEASLYPTVSDVWKDLQKPIVLTR CCEEECCHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCCHHHHHHHHCCCEEEEC KPVPVWLRFHCNDITGHISLNKRAIVCNARIMTNMRMLTDTTAISPPTPLPRFRQTPRDS CCCEEEEEEEECCEEEEEEECCEEEEEEEEHHHCEEEEECCCCCCCCCCCCHHHCCCCHH ISTISDVNFYALVPFASINRNLNDVFMNRRFSRSGYDIVVRSVEAYGSSSGLSVAIMTDL HHHHCCCCEEEEEEHHHHCCCHHHHHHCCCCCCCCCEEEEEEHHHCCCCCCCEEEEEEEC DLKSHIVISGRPRYDIPTHTLSIDHFDYSIDTGNPIIRTRELILHDAIRDSISTRLDVQI CCCCEEEEECCCCCCCCCEEEEEECEEEEECCCCCCHHHHHHHHHHHHHHHHCCEEEEEH GSLVDRLPTIITRAVSKAKAGRTIDLTIDSLAIRKCDIRVGRNNIYLLVNATAKNALRIK HHHHHHHHHHHHHHHHHHHCCCEEEEEEEEEEEEEEEEEECCCCEEEEEECCCCCCEEEE RIKSGKVIRIRKQAETKDQNPTSQLPRPPDTDNKSRLLPVTARPLQLTNHF EECCCCEEEEEECCCCCCCCCHHCCCCCCCCCCCCEEEEEECCCEECCCCC >Mature Secondary Structure PTSIGQKGKMKKALLITGLVASLLAVLGLWLHRSYTILKTKPPAPLTTDVKLEQPSSLF CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCEEEEEECCCCCCEECEEECCCCCCE NLPISIEHTVLADYLNGKIRGNFLNADLWLQKKHKERVSLALTREENITISSNGHKLFCT ECCEEECHHHHHHHHCCEEEEEEECCEEEEEHHCCCEEEEEEEECCCEEEECCCCEEEEE FPVSAEARLTDSRFGKFLAKLLVWPIHAKAVVTFSTPIALDRNWHLKTRFKIENIRWEEE ECCCCCCCCCHHHHHHHHHHHHHCCCCCEEEEEEECCEEECCCCEEEEEEEEECCCCCCC PVLKIGPFRKHIRADVDTLLSDNKRGLTALLDAEIDKEASLYPTVSDVWKDLQKPIVLTR CCEEECCHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCCHHHHHHHHCCCEEEEC KPVPVWLRFHCNDITGHISLNKRAIVCNARIMTNMRMLTDTTAISPPTPLPRFRQTPRDS CCCEEEEEEEECCEEEEEEECCEEEEEEEEHHHCEEEEECCCCCCCCCCCCHHHCCCCHH ISTISDVNFYALVPFASINRNLNDVFMNRRFSRSGYDIVVRSVEAYGSSSGLSVAIMTDL HHHHCCCCEEEEEEHHHHCCCHHHHHHCCCCCCCCCEEEEEEHHHCCCCCCCEEEEEEEC DLKSHIVISGRPRYDIPTHTLSIDHFDYSIDTGNPIIRTRELILHDAIRDSISTRLDVQI CCCCEEEEECCCCCCCCCEEEEEECEEEEECCCCCCHHHHHHHHHHHHHHHHCCEEEEEH GSLVDRLPTIITRAVSKAKAGRTIDLTIDSLAIRKCDIRVGRNNIYLLVNATAKNALRIK HHHHHHHHHHHHHHHHHHHCCCEEEEEEEEEEEEEEEEEECCCCEEEEEECCCCCCEEEE RIKSGKVIRIRKQAETKDQNPTSQLPRPPDTDNKSRLLPVTARPLQLTNHF EECCCCEEEEEECCCCCCCCCHHCCCCCCCCCCCCEEEEEECCCEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA