| Definition | Chlorobium tepidum TLS, complete genome. |
|---|---|
| Accession | NC_002932 |
| Length | 2,154,946 |
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The map label for this gene is yieF [H]
Identifier: 21674283
GI number: 21674283
Start: 1369107
End: 1369670
Strand: Reverse
Name: yieF [H]
Synonym: CT1462
Alternate gene names: 21674283
Gene position: 1369670-1369107 (Counterclockwise)
Preceding gene: 21674288
Following gene: 21674281
Centisome position: 63.56
GC content: 59.75
Gene sequence:
>564_bases ATGAACACCTATCGTATCGTTGTGGTTGTTGGCAGCATCAGGCGCGAGTCGCTGAACCGCAGGCTTGCTGACGCGCTCAT CCGGCTCGCGCCTGCCGACTTTGCTTTCCATCACCTCCGCATCGATGATCTTCCGTTGTATAATCAGGATGACGAAGAGC ACCCGACCGAATCGATGCAACGGTTGAGGCGTGAGATAGCCGAGGCTGACGGCATTATGTTCTGTACGCCCGAATACAAT CGCTCGATTCCCGGCGTGCTCAAAAATGCCATTGATGTCGGATCCCGTCCCTACGGGTACAACGCCTGGCAGGGCAAACC GGCTGGCATTATCGGCCTTTCATCGGGCGCCTGCGGAACAGCAATGGCCCAGCAGCACCTGCGCAACATCCTCGCCGTGC TCGACGTTCCAACAATGGCCCAGCCAGAAGCCTTCATCCAGTTTCGCGACGATCTCTTCGACGCCGACGGCGGAATTGGC CCCGGCAGCCGGGATTTCCTGCAAGGCTGGATGGATCGCTTCGCCGCGTGGGTGCGGCTGTGCGCCAAGCCGCGCAACGG ATGA
Upstream 100 bases:
>100_bases GCCGCGGCGTTTCGGTATGCGCGCGACTGGATTCGGGAAACCAAATGCGGTGGCGGGACGTTCGAGCAGATGGTCTTGAC GAACTCTAATCCATCCCGTT
Downstream 100 bases:
>100_bases AGCCGCACTGCTTTTTCTTTTCGAGCAAAGCGTTGAGGTTTTTTGTGCATTGAACCGTGTTCGGATGCTTTGGGCCGAGC GCTTTTTCGCCGATAGCGAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 187; Mature: 187
Protein sequence:
>187_residues MNTYRIVVVVGSIRRESLNRRLADALIRLAPADFAFHHLRIDDLPLYNQDDEEHPTESMQRLRREIAEADGIMFCTPEYN RSIPGVLKNAIDVGSRPYGYNAWQGKPAGIIGLSSGACGTAMAQQHLRNILAVLDVPTMAQPEAFIQFRDDLFDADGGIG PGSRDFLQGWMDRFAAWVRLCAKPRNG
Sequences:
>Translated_187_residues MNTYRIVVVVGSIRRESLNRRLADALIRLAPADFAFHHLRIDDLPLYNQDDEEHPTESMQRLRREIAEADGIMFCTPEYN RSIPGVLKNAIDVGSRPYGYNAWQGKPAGIIGLSSGACGTAMAQQHLRNILAVLDVPTMAQPEAFIQFRDDLFDADGGIG PGSRDFLQGWMDRFAAWVRLCAKPRNG >Mature_187_residues MNTYRIVVVVGSIRRESLNRRLADALIRLAPADFAFHHLRIDDLPLYNQDDEEHPTESMQRLRREIAEADGIMFCTPEYN RSIPGVLKNAIDVGSRPYGYNAWQGKPAGIIGLSSGACGTAMAQQHLRNILAVLDVPTMAQPEAFIQFRDDLFDADGGIG PGSRDFLQGWMDRFAAWVRLCAKPRNG
Specific function: Unknown
COG id: COG0431
COG function: function code R; Predicted flavoprotein
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ssuE family [H]
Homologues:
Organism=Escherichia coli, GI1790149, Length=180, Percent_Identity=37.7777777777778, Blast_Score=102, Evalue=2e-23,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005025 [H]
Pfam domain/function: PF03358 FMN_red [H]
EC number: NA
Molecular weight: Translated: 20887; Mature: 20887
Theoretical pI: Translated: 6.51; Mature: 6.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNTYRIVVVVGSIRRESLNRRLADALIRLAPADFAFHHLRIDDLPLYNQDDEEHPTESMQ CCCEEEEEEECCHHHHHHHHHHHHHHHHHCCCHHHHHEEEECCCCCCCCCCCCCHHHHHH RLRREIAEADGIMFCTPEYNRSIPGVLKNAIDVGSRPYGYNAWQGKPAGIIGLSSGACGT HHHHHHHHCCCEEEECCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCEEEECCCCCHH AMAQQHLRNILAVLDVPTMAQPEAFIQFRDDLFDADGGIGPGSRDFLQGWMDRFAAWVRL HHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHH CAKPRNG HCCCCCC >Mature Secondary Structure MNTYRIVVVVGSIRRESLNRRLADALIRLAPADFAFHHLRIDDLPLYNQDDEEHPTESMQ CCCEEEEEEECCHHHHHHHHHHHHHHHHHCCCHHHHHEEEECCCCCCCCCCCCCHHHHHH RLRREIAEADGIMFCTPEYNRSIPGVLKNAIDVGSRPYGYNAWQGKPAGIIGLSSGACGT HHHHHHHHCCCEEEECCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCEEEECCCCCHH AMAQQHLRNILAVLDVPTMAQPEAFIQFRDDLFDADGGIGPGSRDFLQGWMDRFAAWVRL HHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHH CAKPRNG HCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]