Definition Chlorobium tepidum TLS, complete genome.
Accession NC_002932
Length 2,154,946

Click here to switch to the map view.

The map label for this gene is 21674258

Identifier: 21674258

GI number: 21674258

Start: 1348361

End: 1348897

Strand: Direct

Name: 21674258

Synonym: CT1437

Alternate gene names: NA

Gene position: 1348361-1348897 (Clockwise)

Preceding gene: 21674255

Following gene: 21674260

Centisome position: 62.57

GC content: 54.38

Gene sequence:

>537_bases
ATGCCCTCCATGATCGACCTTTCTGGCTATCCCGATAGCTCTGTGTTTTATGGAAAAATTTACGTACACTTCGTTAACAT
TTCCGTGAACACGACACTACGCGACACCATGCTCATCTCCAGAAAAATCGAGATCGACTACGGCCACACCCTTCCGAACA
GCTTCACGTTCTGCAACCAGTTGCACGGGCATCGCGGCGTTATCGTGGCAACCGTCGAAGGGCCGGTCATCGACCGCGCC
GGAGATGCCGAAGAAGGCATGGTAATAGATTTCAAGTTCCTGCGGCAGATCATGGACGAACATATCCACGATCAGCTCGA
CCACGGCTTCGCAGTCTGGAAAGAAGACAAGGAAGACCTCGAATTCATCCTCAAACGCAACACCCGCGTGCTTGTAACCG
ACGCCCCCCCCACCGCCGAATGCCTCGCCAGATGGGCCTTCAACCAGATCAGCGGCAAGCTTCCCGAAGGGGTCATTCTC
AAAAACCTCCGCTGGTACGAAACACCGAACAATTGGGCGGACTACACGGGCGGGTAA

Upstream 100 bases:

>100_bases
GCTTAAAGGTTTCCCAGCGTCGAGCAGCGGCACTAACCGACAAATGTAAACAAAACAAGGCAAACCACCCGCTTGCCATT
CTCGATCTTCTGTTCCGGAA

Downstream 100 bases:

>100_bases
GCGGACGCAAATCGAGACAGGTCATCGACCGAACAAAGAAAAATAAGTATATGTTTGGTCCCGGAAGCATATATACCTGT
GAGAAGGTATGCTTATTTTC

Product: 6-pyruvoyl tetrahydrobiopterin synthase, putative

Products: NA

Alternate protein names: 6-Pyruvoyl Tetrahydrobiopterin Synthase; Queuosine Biosynthesis Protein QueD; 6-Pyruvoyl-Tetrahydropterin Synthase; 6-Pyruvoyl Tetrahydrobiopterin Synthase Protein; 6-Pyruvoyltetrahydropterin Synthase; 6-Pyruvoyl-Tetrahydropterin Synthase-Like

Number of amino acids: Translated: 178; Mature: 177

Protein sequence:

>178_residues
MPSMIDLSGYPDSSVFYGKIYVHFVNISVNTTLRDTMLISRKIEIDYGHTLPNSFTFCNQLHGHRGVIVATVEGPVIDRA
GDAEEGMVIDFKFLRQIMDEHIHDQLDHGFAVWKEDKEDLEFILKRNTRVLVTDAPPTAECLARWAFNQISGKLPEGVIL
KNLRWYETPNNWADYTGG

Sequences:

>Translated_178_residues
MPSMIDLSGYPDSSVFYGKIYVHFVNISVNTTLRDTMLISRKIEIDYGHTLPNSFTFCNQLHGHRGVIVATVEGPVIDRA
GDAEEGMVIDFKFLRQIMDEHIHDQLDHGFAVWKEDKEDLEFILKRNTRVLVTDAPPTAECLARWAFNQISGKLPEGVIL
KNLRWYETPNNWADYTGG
>Mature_177_residues
PSMIDLSGYPDSSVFYGKIYVHFVNISVNTTLRDTMLISRKIEIDYGHTLPNSFTFCNQLHGHRGVIVATVEGPVIDRAG
DAEEGMVIDFKFLRQIMDEHIHDQLDHGFAVWKEDKEDLEFILKRNTRVLVTDAPPTAECLARWAFNQISGKLPEGVILK
NLRWYETPNNWADYTGG

Specific function: Unknown

COG id: COG0720

COG function: function code H; 6-pyruvoyl-tetrahydropterin synthase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20315; Mature: 20184

Theoretical pI: Translated: 5.24; Mature: 5.24

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPSMIDLSGYPDSSVFYGKIYVHFVNISVNTTLRDTMLISRKIEIDYGHTLPNSFTFCNQ
CCCEECCCCCCCCCEEEEEEEEEEEEEEECCCHHHHEEEEEEEEEEECCCCCCCHHHHHH
LHGHRGVIVATVEGPVIDRAGDAEEGMVIDFKFLRQIMDEHIHDQLDHGFAVWKEDKEDL
HCCCCCEEEEEECCCEECCCCCCCCCEEEEHHHHHHHHHHHHHHHHHCCEEEECCCHHHH
EFILKRNTRVLVTDAPPTAECLARWAFNQISGKLPEGVILKNLRWYETPNNWADYTGG
HHHHHCCCEEEEECCCCHHHHHHHHHHHHHCCCCCCCEEECCEEEEECCCCCCCCCCC
>Mature Secondary Structure 
PSMIDLSGYPDSSVFYGKIYVHFVNISVNTTLRDTMLISRKIEIDYGHTLPNSFTFCNQ
CCEECCCCCCCCCEEEEEEEEEEEEEEECCCHHHHEEEEEEEEEEECCCCCCCHHHHHH
LHGHRGVIVATVEGPVIDRAGDAEEGMVIDFKFLRQIMDEHIHDQLDHGFAVWKEDKEDL
HCCCCCEEEEEECCCEECCCCCCCCCEEEEHHHHHHHHHHHHHHHHHCCEEEECCCHHHH
EFILKRNTRVLVTDAPPTAECLARWAFNQISGKLPEGVILKNLRWYETPNNWADYTGG
HHHHHCCCEEEEECCCCHHHHHHHHHHHHHCCCCCCCEEECCEEEEECCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA