| Definition | Chlorobium tepidum TLS, complete genome. |
|---|---|
| Accession | NC_002932 |
| Length | 2,154,946 |
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The map label for this gene is tgt [H]
Identifier: 21674218
GI number: 21674218
Start: 1310189
End: 1311322
Strand: Direct
Name: tgt [H]
Synonym: CT1397
Alternate gene names: 21674218
Gene position: 1310189-1311322 (Clockwise)
Preceding gene: 21674216
Following gene: 21674219
Centisome position: 60.8
GC content: 59.08
Gene sequence:
>1134_bases ATGAAGTTTTCAGTTCTCTCGACAGACCGCCACTCAGCCGCGCGTTGCGGCGTGCTCTCAACCAGCCACGGCGACATTCC AACGCCGATTTTCATGCCGGTTGGTACGCGGGCGAGCGTCAAATCAGTCGAGCCGAACGAGCTGAAAGCGCTCGATGCGA AGATCATTCTGGCCAACACTTACCACCTCTATCTGAAACCCGGCAACGATATACTTTTCAAGGCTGGAGGCGTGCACCGT TTCATGAACTGGGATGGCCCGTTGTTGACCGACAGCGGCGGCTATCAGGTCTATTCGCTGACCGATCTGCGGAAAATCAG CGAAGAGGGGGTGATGTTCAAGTCGCACCTCGACGGCTCGAAACTCCACTTTACACCGGAAAACGTCGTTGATACGCAAC GTATTATCGGCAGCGACATCATGATGCCGCTTGACGAATGCCCGCCGTGGCCTGCCGAAAAGGAGTATGTGCAGAAGTCG GGCGAGCTGACGCTGCGCTGGGCCGAGCGGGCACGAAAGCACTTCCTCTCGACCCGACCGCACTACGGCTACGAACAGTT CCAGTTCGGCATCACGCAAGGCGGCACCTTCGACGACCTGCGTGCCCACTCCAGCCGGGCGCTCGTCGATATGGATTTTG ACGGCTACGCGGTCGGCGGCATGGCGGTCGGCGAACCTGCGGAGGAGATGTACCGGATGCTTGAGCTATCGCACACCATT TTGCCCGAATCGAAGCCGCGCTACCTGATGGGCGTCGGCACGCCCGCGAACATTCTCAACGCTATCGAGCGCGGCATCGA CATGTTCGACTGCGTCATCCCCACGCGCGAGGGTCGCAACGGCCGCGTCTATACCCGCAAAGGGACGATCAACCTGCGTG CGGGCAAGTATGCCGACGACTTCCGTCCCATCGACGAAGGCTTCGACAACCACGTCTGCCGCAACTACAGCCGCGCCTAC ATCCGCCACCTGCTCAACGTGGGCGAAATTCTCGGCCTCAAGCTCTGCACCATGCAGAACCTCTCGTTCTACCTCTGGCT CACCAGAACGGCACGCGAGCACATCGCGGCAGGCGACTTCACCGACTGGAAAGAGTCATTCCTCATGGAGTTCAACAGCA ATGACAAAAACTGA
Upstream 100 bases:
>100_bases CGAACACGCGAAGCGTACCAATTTTTATTTGTGAATACGGTTCCCTACCTTCATTCATCGTTATCACCACTCTATCCGTT TTTGCCACCCGCGCATCAAT
Downstream 100 bases:
>100_bases CGAACGCAAACCGGCAATCTTCCTGCTCAGCCTCGGCTGCTCGAAGAACACGGTCGATAGTGAGCGACTCACCGCGCAGG CGGTCGCCTCCGGCCTGACC
Product: tRNA-guanine transglycosylase
Products: NA
Alternate protein names: Guanine insertion enzyme; tRNA-guanine transglycosylase [H]
Number of amino acids: Translated: 377; Mature: 377
Protein sequence:
>377_residues MKFSVLSTDRHSAARCGVLSTSHGDIPTPIFMPVGTRASVKSVEPNELKALDAKIILANTYHLYLKPGNDILFKAGGVHR FMNWDGPLLTDSGGYQVYSLTDLRKISEEGVMFKSHLDGSKLHFTPENVVDTQRIIGSDIMMPLDECPPWPAEKEYVQKS GELTLRWAERARKHFLSTRPHYGYEQFQFGITQGGTFDDLRAHSSRALVDMDFDGYAVGGMAVGEPAEEMYRMLELSHTI LPESKPRYLMGVGTPANILNAIERGIDMFDCVIPTREGRNGRVYTRKGTINLRAGKYADDFRPIDEGFDNHVCRNYSRAY IRHLLNVGEILGLKLCTMQNLSFYLWLTRTAREHIAAGDFTDWKESFLMEFNSNDKN
Sequences:
>Translated_377_residues MKFSVLSTDRHSAARCGVLSTSHGDIPTPIFMPVGTRASVKSVEPNELKALDAKIILANTYHLYLKPGNDILFKAGGVHR FMNWDGPLLTDSGGYQVYSLTDLRKISEEGVMFKSHLDGSKLHFTPENVVDTQRIIGSDIMMPLDECPPWPAEKEYVQKS GELTLRWAERARKHFLSTRPHYGYEQFQFGITQGGTFDDLRAHSSRALVDMDFDGYAVGGMAVGEPAEEMYRMLELSHTI LPESKPRYLMGVGTPANILNAIERGIDMFDCVIPTREGRNGRVYTRKGTINLRAGKYADDFRPIDEGFDNHVCRNYSRAY IRHLLNVGEILGLKLCTMQNLSFYLWLTRTAREHIAAGDFTDWKESFLMEFNSNDKN >Mature_377_residues MKFSVLSTDRHSAARCGVLSTSHGDIPTPIFMPVGTRASVKSVEPNELKALDAKIILANTYHLYLKPGNDILFKAGGVHR FMNWDGPLLTDSGGYQVYSLTDLRKISEEGVMFKSHLDGSKLHFTPENVVDTQRIIGSDIMMPLDECPPWPAEKEYVQKS GELTLRWAERARKHFLSTRPHYGYEQFQFGITQGGTFDDLRAHSSRALVDMDFDGYAVGGMAVGEPAEEMYRMLELSHTI LPESKPRYLMGVGTPANILNAIERGIDMFDCVIPTREGRNGRVYTRKGTINLRAGKYADDFRPIDEGFDNHVCRNYSRAY IRHLLNVGEILGLKLCTMQNLSFYLWLTRTAREHIAAGDFTDWKESFLMEFNSNDKN
Specific function: Exchanges the guanine residue with 7-aminomethyl-7- deazaguanine in tRNAs with GU(N) anticodons (tRNA-Asp, -Asn, -His and -Tyr). After this exchange, a cyclopentendiol moiety is attached to the 7-aminomethyl group of 7-deazaguanine, resulting in the hyper
COG id: COG0343
COG function: function code J; Queuine/archaeosine tRNA-ribosyltransferase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the queuine tRNA-ribosyltransferase family [H]
Homologues:
Organism=Homo sapiens, GI13654276, Length=357, Percent_Identity=39.7759103641457, Blast_Score=267, Evalue=1e-71, Organism=Escherichia coli, GI1786607, Length=371, Percent_Identity=47.7088948787062, Blast_Score=356, Evalue=2e-99, Organism=Caenorhabditis elegans, GI17544680, Length=372, Percent_Identity=35.4838709677419, Blast_Score=248, Evalue=3e-66, Organism=Caenorhabditis elegans, GI25146502, Length=171, Percent_Identity=27.4853801169591, Blast_Score=77, Evalue=2e-14, Organism=Drosophila melanogaster, GI19920510, Length=368, Percent_Identity=39.1304347826087, Blast_Score=281, Evalue=6e-76,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004803 - InterPro: IPR002616 [H]
Pfam domain/function: PF01702 TGT [H]
EC number: =2.4.2.29 [H]
Molecular weight: Translated: 42662; Mature: 42662
Theoretical pI: Translated: 6.84; Mature: 6.84
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 5.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKFSVLSTDRHSAARCGVLSTSHGDIPTPIFMPVGTRASVKSVEPNELKALDAKIILANT CEEEEECCCCCCHHHCCEEECCCCCCCCCEEEECCCCCCCCCCCCCHHHEECEEEEEEEE YHLYLKPGNDILFKAGGVHRFMNWDGPLLTDSGGYQVYSLTDLRKISEEGVMFKSHLDGS EEEEEECCCEEEEECCCEEEEECCCCCEEECCCCEEEEEEHHHHHHHHCCCEEEECCCCC KLHFTPENVVDTQRIIGSDIMMPLDECPPWPAEKEYVQKSGELTLRWAERARKHFLSTRP EEEECCHHHHHHHHHHCCCCCCCHHCCCCCCCCHHHHHCCCCEEEHHHHHHHHHHHCCCC HYGYEQFQFGITQGGTFDDLRAHSSRALVDMDFDGYAVGGMAVGEPAEEMYRMLELSHTI CCCHHHEEEECCCCCCHHHHHHCCCCEEEEECCCCEEECCEECCCCHHHHHHHHHHHHHH LPESKPRYLMGVGTPANILNAIERGIDMFDCVIPTREGRNGRVYTRKGTINLRAGKYADD CCCCCCCEEEECCCHHHHHHHHHHCCCEEEEEECCCCCCCCEEEEECCEEEEECCCCCCC FRPIDEGFDNHVCRNYSRAYIRHLLNVGEILGLKLCTMQNLSFYLWLTRTAREHIAAGDF CCCHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCEEEEEEEHHHHHHHCCCCC TDWKESFLMEFNSNDKN CHHHHHHHEEECCCCCC >Mature Secondary Structure MKFSVLSTDRHSAARCGVLSTSHGDIPTPIFMPVGTRASVKSVEPNELKALDAKIILANT CEEEEECCCCCCHHHCCEEECCCCCCCCCEEEECCCCCCCCCCCCCHHHEECEEEEEEEE YHLYLKPGNDILFKAGGVHRFMNWDGPLLTDSGGYQVYSLTDLRKISEEGVMFKSHLDGS EEEEEECCCEEEEECCCEEEEECCCCCEEECCCCEEEEEEHHHHHHHHCCCEEEECCCCC KLHFTPENVVDTQRIIGSDIMMPLDECPPWPAEKEYVQKSGELTLRWAERARKHFLSTRP EEEECCHHHHHHHHHHCCCCCCCHHCCCCCCCCHHHHHCCCCEEEHHHHHHHHHHHCCCC HYGYEQFQFGITQGGTFDDLRAHSSRALVDMDFDGYAVGGMAVGEPAEEMYRMLELSHTI CCCHHHEEEECCCCCCHHHHHHCCCCEEEEECCCCEEECCEECCCCHHHHHHHHHHHHHH LPESKPRYLMGVGTPANILNAIERGIDMFDCVIPTREGRNGRVYTRKGTINLRAGKYADD CCCCCCCEEEECCCHHHHHHHHHHCCCEEEEEECCCCCCCCEEEEECCEEEEECCCCCCC FRPIDEGFDNHVCRNYSRAYIRHLLNVGEILGLKLCTMQNLSFYLWLTRTAREHIAAGDF CCCHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCEEEEEEEHHHHHHHCCCCC TDWKESFLMEFNSNDKN CHHHHHHHEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA