| Definition | Chlorobium tepidum TLS, complete genome. |
|---|---|
| Accession | NC_002932 |
| Length | 2,154,946 |
Click here to switch to the map view.
The map label for this gene is zraS [C]
Identifier: 21674198
GI number: 21674198
Start: 1292621
End: 1293634
Strand: Reverse
Name: zraS [C]
Synonym: CT1376
Alternate gene names: 21674198
Gene position: 1293634-1292621 (Counterclockwise)
Preceding gene: 21674200
Following gene: 21674196
Centisome position: 60.03
GC content: 54.54
Gene sequence:
>1014_bases ATGCTTTCAAACAGTTTCCCTGAGACCGACAAACGCCACAAGCGCATCGAGGTCATTCATCATGCGGCGCTCAGGGCGCG CGGTCTTGTTCAGCAGCTCCTGGCCTTCAGCAGCCGCCAGACGCTTGAATTCAGAATGCTTGACCTCAACCGGGTTGTCA GGGATTTCGAGCAGTTGCTCCGCAGAACCATCCGGGACGATATCAATATTCGGTATCATCTGCATGACGGGAGGCTGGTC ATTCAAGGAGATGTTGGCCAGATCAAACAGATTATCATGAATCTTGCGGTCAACGCCGAGGATGCGATGCCATCGGGTGG AGAATTAACCGTGAAGACTTCAACGATGGTGATCGGCAAGGGGCAGGAGAAATATTTCGAAGGGTTGCCCAGCGGAGACT ATGCTGTTTTGACCGTTTGCGATACGGGCACGGGGATCGATCAGGAGACGCTTGCCTGCAAAGGGCGGGGGACTGGTCTC GGTCTTTCGACGGTTTATGGTATTGTCAGGCAGCATGGAGGCATCATTCAGGCGGGGAGTGAGGCTGGTTCTGGAGCCTC GTTCAGGGTATGCTTCCCTCTCCGGGAGAGCGAACCTGAGCCGCTTCAGCCGGTTAAGCCAAAGCCGCATCAGAAAGGCG AGGGGGCAAAAGTGCTGGTTGTCGAGGATGACGAGATTGTTCGCAAATTCGTCGTTCAGGCTTTAGACGAAGAGGGATTC GAAACCCGTGAGGCGGAGAACGGACAAGCGGCGCTGGAGCTGCTTGAAAAAGGCGATTTCAAGCCCGAGCTGTTACTGAC TGATCTGGTCATGCGCGGCATGAACGGGCGGATGCTCTATGAAAAGGTGTGTGACTTCATGCCTGGCATCAAGGTGATCT ACATGTCGGGGTACCCCAAGGACATCATTTCCCGGCACGGCGTACTCGATACGGGGCTGTCATTTCTGCTGAAGCCGTTT CCGGTTCCGGTGCTTCTGGATAAGGTGAAAGACGTGCTAAAAAACGGAGAATGA
Upstream 100 bases:
>100_bases GCTTTTTCAGTCCCAGAAGATCCAATCGATCGGCCGCTTGGCGGGCGGCATCGCCCATGACCTGAACAATCTTCTGACGC CAGTGCTCGGTTATTCCGAG
Downstream 100 bases:
>100_bases TGCGGGAGCCGGGCGGGAAAAGAAAAGCCGAAACCGAAGCTGTAAGCCGAATTCTGTCCATCACCATCAAGTAGTGATGT TGCAGCCATTTATCTGATGC
Product: sensor histidine kinase/response regulator
Products: NA
Alternate protein names: Blue-light-activated histidine kinase; Response regulator [H]
Number of amino acids: Translated: 337; Mature: 337
Protein sequence:
>337_residues MLSNSFPETDKRHKRIEVIHHAALRARGLVQQLLAFSSRQTLEFRMLDLNRVVRDFEQLLRRTIRDDINIRYHLHDGRLV IQGDVGQIKQIIMNLAVNAEDAMPSGGELTVKTSTMVIGKGQEKYFEGLPSGDYAVLTVCDTGTGIDQETLACKGRGTGL GLSTVYGIVRQHGGIIQAGSEAGSGASFRVCFPLRESEPEPLQPVKPKPHQKGEGAKVLVVEDDEIVRKFVVQALDEEGF ETREAENGQAALELLEKGDFKPELLLTDLVMRGMNGRMLYEKVCDFMPGIKVIYMSGYPKDIISRHGVLDTGLSFLLKPF PVPVLLDKVKDVLKNGE
Sequences:
>Translated_337_residues MLSNSFPETDKRHKRIEVIHHAALRARGLVQQLLAFSSRQTLEFRMLDLNRVVRDFEQLLRRTIRDDINIRYHLHDGRLV IQGDVGQIKQIIMNLAVNAEDAMPSGGELTVKTSTMVIGKGQEKYFEGLPSGDYAVLTVCDTGTGIDQETLACKGRGTGL GLSTVYGIVRQHGGIIQAGSEAGSGASFRVCFPLRESEPEPLQPVKPKPHQKGEGAKVLVVEDDEIVRKFVVQALDEEGF ETREAENGQAALELLEKGDFKPELLLTDLVMRGMNGRMLYEKVCDFMPGIKVIYMSGYPKDIISRHGVLDTGLSFLLKPF PVPVLLDKVKDVLKNGE >Mature_337_residues MLSNSFPETDKRHKRIEVIHHAALRARGLVQQLLAFSSRQTLEFRMLDLNRVVRDFEQLLRRTIRDDINIRYHLHDGRLV IQGDVGQIKQIIMNLAVNAEDAMPSGGELTVKTSTMVIGKGQEKYFEGLPSGDYAVLTVCDTGTGIDQETLACKGRGTGL GLSTVYGIVRQHGGIIQAGSEAGSGASFRVCFPLRESEPEPLQPVKPKPHQKGEGAKVLVVEDDEIVRKFVVQALDEEGF ETREAENGQAALELLEKGDFKPELLLTDLVMRGMNGRMLYEKVCDFMPGIKVIYMSGYPKDIISRHGVLDTGLSFLLKPF PVPVLLDKVKDVLKNGE
Specific function: Photosensitive kinase and response regulator that is involved in increased bacterial virulence upon exposure to light [H]
COG id: COG0642
COG function: function code T; Signal transduction histidine kinase
Gene ontology:
Cell location: Integral Membrane Protein. Inner Membrane [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 response regulatory domain [H]
Homologues:
Organism=Escherichia coli, GI1790436, Length=204, Percent_Identity=28.921568627451, Blast_Score=86, Evalue=4e-18,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003594 - InterPro: IPR011006 - InterPro: IPR001610 - InterPro: IPR000014 - InterPro: IPR000700 - InterPro: IPR013767 - InterPro: IPR004358 - InterPro: IPR003661 - InterPro: IPR005467 - InterPro: IPR009082 - InterPro: IPR001789 [H]
Pfam domain/function: PF02518 HATPase_c; PF00512 HisKA; PF00989 PAS; PF00072 Response_reg [H]
EC number: =2.7.13.3 [H]
Molecular weight: Translated: 37385; Mature: 37385
Theoretical pI: Translated: 6.52; Mature: 6.52
Prosite motif: PS50110 RESPONSE_REGULATORY ; PS50109 HIS_KIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLSNSFPETDKRHKRIEVIHHAALRARGLVQQLLAFSSRQTLEFRMLDLNRVVRDFEQLL CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEHHHHHHHHHHHHHHH RRTIRDDINIRYHLHDGRLVIQGDVGQIKQIIMNLAVNAEDAMPSGGELTVKTSTMVIGK HHHHHCCCEEEEEEECCEEEEECCHHHHHHHHHHHHCCCHHCCCCCCEEEEEEEEEEEEC GQEKYFEGLPSGDYAVLTVCDTGTGIDQETLACKGRGTGLGLSTVYGIVRQHGGIIQAGS CHHHHHCCCCCCCEEEEEEECCCCCCCHHHEEECCCCCCCCHHHHHHHHHHCCCEEEECC EAGSGASFRVCFPLRESEPEPLQPVKPKPHQKGEGAKVLVVEDDEIVRKFVVQALDEEGF CCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCEEEEECCHHHHHHHHHHHHHCCCC ETREAENGQAALELLEKGDFKPELLLTDLVMRGMNGRMLYEKVCDFMPGIKVIYMSGYPK CCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCHHHHHHHHCCCCEEEEECCCCH DIISRHGVLDTGLSFLLKPFPVPVLLDKVKDVLKNGE HHHHHCCCHHHHHHHHHCCCCHHHHHHHHHHHHHCCC >Mature Secondary Structure MLSNSFPETDKRHKRIEVIHHAALRARGLVQQLLAFSSRQTLEFRMLDLNRVVRDFEQLL CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEHHHHHHHHHHHHHHH RRTIRDDINIRYHLHDGRLVIQGDVGQIKQIIMNLAVNAEDAMPSGGELTVKTSTMVIGK HHHHHCCCEEEEEEECCEEEEECCHHHHHHHHHHHHCCCHHCCCCCCEEEEEEEEEEEEC GQEKYFEGLPSGDYAVLTVCDTGTGIDQETLACKGRGTGLGLSTVYGIVRQHGGIIQAGS CHHHHHCCCCCCCEEEEEEECCCCCCCHHHEEECCCCCCCCHHHHHHHHHHCCCEEEECC EAGSGASFRVCFPLRESEPEPLQPVKPKPHQKGEGAKVLVVEDDEIVRKFVVQALDEEGF CCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCEEEEECCHHHHHHHHHHHHHCCCC ETREAENGQAALELLEKGDFKPELLLTDLVMRGMNGRMLYEKVCDFMPGIKVIYMSGYPK CCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCHHHHHHHHCCCCEEEEECCCCH DIISRHGVLDTGLSFLLKPFPVPVLLDKVKDVLKNGE HHHHHCCCHHHHHHHHHCCCCHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA