Definition Chlorobium tepidum TLS, complete genome.
Accession NC_002932
Length 2,154,946

Click here to switch to the map view.

The map label for this gene is 21674197

Identifier: 21674197

GI number: 21674197

Start: 1291382

End: 1292143

Strand: Direct

Name: 21674197

Synonym: CT1375

Alternate gene names: NA

Gene position: 1291382-1292143 (Clockwise)

Preceding gene: 21674195

Following gene: 21674199

Centisome position: 59.93

GC content: 54.99

Gene sequence:

>762_bases
ATGATCGAAAACATCATGAGTCTGCAGAAAGGCCTGCCGGAAGAGATTTCCGCCCTCGAGGAGGATCTCGCATTCACCTC
CCGCCAGATCGAGGCCCGGAAGAAAATCGCCGACGAACGTCAGAAGCTTCGGGAGCGCCTGAACAGCGTCATTCACGATT
GCAAGGAAAAGATCAAGTCATTCAAGGAAAAGCAGACGTTGGCCCGCAACAACAAGGAATACGATGCCCTCTCCAAGCAG
ATTGAATACGAGGAGAAGGAGATTGCACAGGCCGAAATCCAGCTTCAGGACATTTCGCACGCTGAGCACCACGCCCAGGA
GTTGCAGAAAAAAGGACGCGAGCTGATCGCGGAGAACCGTTACGATGAGATTTCCGAAGAGATGATGCCTGATGATGTCT
TGCAGCAGCAGATGGAGGATCTCGGACAGCAGGTGCGACAGAAAAAAGAGGAGCTGGAAAGCATTGTCGTCGAAACCGCC
GAAGAGGTCGCCCAGCTCAAGGCGGTTCTCTCAGAACAAAGATCGGTGGTCGCCCAGCAAGCGAAGCGCCTGCTCGACAA
GTACGATCATCTCAAGAGCGGCTCGATACAGAATGCTGTGGTCAAGCTTGACCGTCAGGCCTGCTCCGGTTGCAACACCA
GGGTTCCAACCAACCGCCATACCCTGATCGTGCAGGGCGGTTTTTACGTTTGTGAATCGTGCGGCCGCATTGTGGTGCAC
GAACGGCTCTTCGATGAAGCCGCGGCCAGCGGCCAGCAGTAA

Upstream 100 bases:

>100_bases
CCATGGAGGTGCTTTTTTGCTTCTTTTTAATTTCTAAACCGGTGTCGTAGTGGATCATACAAAAATCAATCTCATCGTTC
GCCTTCAGCACATCGACAAC

Downstream 100 bases:

>100_bases
CAGCCCCAACAAACTGCCGAAACAGATTGCTCCTTTCGGCACGCCTGATGTTCTTCTACATTGCTGAAACCGCAAGCGTG
CAGTCGCTGTATGGTATAAC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 253; Mature: 253

Protein sequence:

>253_residues
MIENIMSLQKGLPEEISALEEDLAFTSRQIEARKKIADERQKLRERLNSVIHDCKEKIKSFKEKQTLARNNKEYDALSKQ
IEYEEKEIAQAEIQLQDISHAEHHAQELQKKGRELIAENRYDEISEEMMPDDVLQQQMEDLGQQVRQKKEELESIVVETA
EEVAQLKAVLSEQRSVVAQQAKRLLDKYDHLKSGSIQNAVVKLDRQACSGCNTRVPTNRHTLIVQGGFYVCESCGRIVVH
ERLFDEAAASGQQ

Sequences:

>Translated_253_residues
MIENIMSLQKGLPEEISALEEDLAFTSRQIEARKKIADERQKLRERLNSVIHDCKEKIKSFKEKQTLARNNKEYDALSKQ
IEYEEKEIAQAEIQLQDISHAEHHAQELQKKGRELIAENRYDEISEEMMPDDVLQQQMEDLGQQVRQKKEELESIVVETA
EEVAQLKAVLSEQRSVVAQQAKRLLDKYDHLKSGSIQNAVVKLDRQACSGCNTRVPTNRHTLIVQGGFYVCESCGRIVVH
ERLFDEAAASGQQ
>Mature_253_residues
MIENIMSLQKGLPEEISALEEDLAFTSRQIEARKKIADERQKLRERLNSVIHDCKEKIKSFKEKQTLARNNKEYDALSKQ
IEYEEKEIAQAEIQLQDISHAEHHAQELQKKGRELIAENRYDEISEEMMPDDVLQQQMEDLGQQVRQKKEELESIVVETA
EEVAQLKAVLSEQRSVVAQQAKRLLDKYDHLKSGSIQNAVVKLDRQACSGCNTRVPTNRHTLIVQGGFYVCESCGRIVVH
ERLFDEAAASGQQ

Specific function: Unknown

COG id: COG1579

COG function: function code R; Zn-ribbon protein, possibly nucleic acid-binding

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 29044; Mature: 29044

Theoretical pI: Translated: 5.18; Mature: 5.18

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIENIMSLQKGLPEEISALEEDLAFTSRQIEARKKIADERQKLRERLNSVIHDCKEKIKS
CCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FKEKQTLARNNKEYDALSKQIEYEEKEIAQAEIQLQDISHAEHHAQELQKKGRELIAENR
HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCH
YDEISEEMMPDDVLQQQMEDLGQQVRQKKEELESIVVETAEEVAQLKAVLSEQRSVVAQQ
HHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AKRLLDKYDHLKSGSIQNAVVKLDRQACSGCNTRVPTNRHTLIVQGGFYVCESCGRIVVH
HHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCCCCEEEEECHHHHHHHHCHHHHH
ERLFDEAAASGQQ
HHHHHHHHCCCCC
>Mature Secondary Structure
MIENIMSLQKGLPEEISALEEDLAFTSRQIEARKKIADERQKLRERLNSVIHDCKEKIKS
CCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FKEKQTLARNNKEYDALSKQIEYEEKEIAQAEIQLQDISHAEHHAQELQKKGRELIAENR
HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCH
YDEISEEMMPDDVLQQQMEDLGQQVRQKKEELESIVVETAEEVAQLKAVLSEQRSVVAQQ
HHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AKRLLDKYDHLKSGSIQNAVVKLDRQACSGCNTRVPTNRHTLIVQGGFYVCESCGRIVVH
HHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCCCCEEEEECHHHHHHHHCHHHHH
ERLFDEAAASGQQ
HHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA