Definition Chlorobium tepidum TLS, complete genome.
Accession NC_002932
Length 2,154,946

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The map label for this gene is 21674174

Identifier: 21674174

GI number: 21674174

Start: 1271029

End: 1271856

Strand: Reverse

Name: 21674174

Synonym: CT1352

Alternate gene names: NA

Gene position: 1271856-1271029 (Counterclockwise)

Preceding gene: 21674177

Following gene: 21674165

Centisome position: 59.02

GC content: 59.66

Gene sequence:

>828_bases
ATGTTGCGAAGTAAAGAGGAGTGGCAAGAGACCGCCGAGTCGGTTTTGCCGCCGGAAGAGCGGTATGTCGACCGTAACCG
CATGATTACCGCTCGCTATGCAGGCTGGTATCTCGAAAATCCTGGAACCCTGAAATGGGCCGGTATGGCGGCCTTTGCTT
CCCGGCAGGTCGGCTTGGCCATTATGGCTGCCGATCTCATGACCGCGCCAGAGCGAGACGGTTCCGGCAATCCCTTGCTG
GCACTCCACCGTTTCGGTGTGGACTGGTTCATGCGTGCCGATTTCGAACAGATTCGCCGGGGCAACAACAACATTTACCG
TGATATCGCCTGGGCGCACGCTGCTTATGTCGGTGGCGGGATGGCCGAGCTGGAAGCGTGCGCTTCCGAGCCCGAGGATA
CTTTGCTGGTGAAGGGGTTCGGTATGATCGATCGGGGGCGCGCACTGTGTCGCCGGGATGCCGGCAGCCCGGCGGGGGAG
CGATTGATCTGGGAGGGCAATATCTGCCTGCTTCGTCACGAGCAGGTCGATGTGCTTCAGCCGATATTTGACACGCTGAG
CGTCGGCGGGCGCATTATGGCTTCGTTCGGCAGCGAGCTCGATTTTTCAGGAGCGCTGTTTCCCGACTCTCGTTTCCGTA
CCTCCTTCAGCTTGTTTTACGGTTATCTCGAAACACTTACGGGCCTGAAAAGCGTGGCCAATCCCGACGACCGGTGGCGT
TGGGTCGAACAGAGCGTCATCCCCTCATGGCAGGCGGCAGAGCGACAGATGAGCGCGCCGTGCCCGACCAGAAACGCGTT
GCAGAAAATGGCTGCCTGTGAGCAGTGA

Upstream 100 bases:

>100_bases
ATGTTCTCCTCAAATCCGGTGATGGCATCGTTTTTGGGGACTCCTTGCGAAACACGATAACGGTGAGTTGGAGTTGTAAC
CCATTTCACGACAAATATCT

Downstream 100 bases:

>100_bases
GCTGCTCATTTACCTCGAAGCGCGGAGTGCAGTGACCGGGTCAAGGCTGGAGGCTTTCCAGGCCGGGAAAAGTCCGAACG
AGATGCCGATGACCGAGCAT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 275; Mature: 275

Protein sequence:

>275_residues
MLRSKEEWQETAESVLPPEERYVDRNRMITARYAGWYLENPGTLKWAGMAAFASRQVGLAIMAADLMTAPERDGSGNPLL
ALHRFGVDWFMRADFEQIRRGNNNIYRDIAWAHAAYVGGGMAELEACASEPEDTLLVKGFGMIDRGRALCRRDAGSPAGE
RLIWEGNICLLRHEQVDVLQPIFDTLSVGGRIMASFGSELDFSGALFPDSRFRTSFSLFYGYLETLTGLKSVANPDDRWR
WVEQSVIPSWQAAERQMSAPCPTRNALQKMAACEQ

Sequences:

>Translated_275_residues
MLRSKEEWQETAESVLPPEERYVDRNRMITARYAGWYLENPGTLKWAGMAAFASRQVGLAIMAADLMTAPERDGSGNPLL
ALHRFGVDWFMRADFEQIRRGNNNIYRDIAWAHAAYVGGGMAELEACASEPEDTLLVKGFGMIDRGRALCRRDAGSPAGE
RLIWEGNICLLRHEQVDVLQPIFDTLSVGGRIMASFGSELDFSGALFPDSRFRTSFSLFYGYLETLTGLKSVANPDDRWR
WVEQSVIPSWQAAERQMSAPCPTRNALQKMAACEQ
>Mature_275_residues
MLRSKEEWQETAESVLPPEERYVDRNRMITARYAGWYLENPGTLKWAGMAAFASRQVGLAIMAADLMTAPERDGSGNPLL
ALHRFGVDWFMRADFEQIRRGNNNIYRDIAWAHAAYVGGGMAELEACASEPEDTLLVKGFGMIDRGRALCRRDAGSPAGE
RLIWEGNICLLRHEQVDVLQPIFDTLSVGGRIMASFGSELDFSGALFPDSRFRTSFSLFYGYLETLTGLKSVANPDDRWR
WVEQSVIPSWQAAERQMSAPCPTRNALQKMAACEQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 30868; Mature: 30868

Theoretical pI: Translated: 5.06; Mature: 5.06

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
5.8 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
4.0 %Met     (Mature Protein)
5.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLRSKEEWQETAESVLPPEERYVDRNRMITARYAGWYLENPGTLKWAGMAAFASRQVGLA
CCCCHHHHHHHHHHCCCCHHHHCCCCCEEEEEECCEEECCCCCEEEHHHHHHHHHHHHHH
IMAADLMTAPERDGSGNPLLALHRFGVDWFMRADFEQIRRGNNNIYRDIAWAHAAYVGGG
HHHHHHHCCCCCCCCCCCEEEEEHHCCHHHHHCCHHHHHCCCCCHHHHHHHHHHHHHCCC
MAELEACASEPEDTLLVKGFGMIDRGRALCRRDAGSPAGERLIWEGNICLLRHEQVDVLQ
HHHHHHHHCCCCCEEEEECCCCHHHHHHHHHHCCCCCCCCEEEEECCEEEEECCHHHHHH
PIFDTLSVGGRIMASFGSELDFSGALFPDSRFRTSFSLFYGYLETLTGLKSVANPDDRWR
HHHHHHHCCCHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHH
WVEQSVIPSWQAAERQMSAPCPTRNALQKMAACEQ
HHHHHHCCCHHHHHHHCCCCCCCHHHHHHHHHCCC
>Mature Secondary Structure
MLRSKEEWQETAESVLPPEERYVDRNRMITARYAGWYLENPGTLKWAGMAAFASRQVGLA
CCCCHHHHHHHHHHCCCCHHHHCCCCCEEEEEECCEEECCCCCEEEHHHHHHHHHHHHHH
IMAADLMTAPERDGSGNPLLALHRFGVDWFMRADFEQIRRGNNNIYRDIAWAHAAYVGGG
HHHHHHHCCCCCCCCCCCEEEEEHHCCHHHHHCCHHHHHCCCCCHHHHHHHHHHHHHCCC
MAELEACASEPEDTLLVKGFGMIDRGRALCRRDAGSPAGERLIWEGNICLLRHEQVDVLQ
HHHHHHHHCCCCCEEEEECCCCHHHHHHHHHHCCCCCCCCEEEEECCEEEEECCHHHHHH
PIFDTLSVGGRIMASFGSELDFSGALFPDSRFRTSFSLFYGYLETLTGLKSVANPDDRWR
HHHHHHHCCCHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHH
WVEQSVIPSWQAAERQMSAPCPTRNALQKMAACEQ
HHHHHHCCCHHHHHHHCCCCCCCHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA