| Definition | Chlorobium tepidum TLS, complete genome. |
|---|---|
| Accession | NC_002932 |
| Length | 2,154,946 |
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The map label for this gene is 21674174
Identifier: 21674174
GI number: 21674174
Start: 1271029
End: 1271856
Strand: Reverse
Name: 21674174
Synonym: CT1352
Alternate gene names: NA
Gene position: 1271856-1271029 (Counterclockwise)
Preceding gene: 21674177
Following gene: 21674165
Centisome position: 59.02
GC content: 59.66
Gene sequence:
>828_bases ATGTTGCGAAGTAAAGAGGAGTGGCAAGAGACCGCCGAGTCGGTTTTGCCGCCGGAAGAGCGGTATGTCGACCGTAACCG CATGATTACCGCTCGCTATGCAGGCTGGTATCTCGAAAATCCTGGAACCCTGAAATGGGCCGGTATGGCGGCCTTTGCTT CCCGGCAGGTCGGCTTGGCCATTATGGCTGCCGATCTCATGACCGCGCCAGAGCGAGACGGTTCCGGCAATCCCTTGCTG GCACTCCACCGTTTCGGTGTGGACTGGTTCATGCGTGCCGATTTCGAACAGATTCGCCGGGGCAACAACAACATTTACCG TGATATCGCCTGGGCGCACGCTGCTTATGTCGGTGGCGGGATGGCCGAGCTGGAAGCGTGCGCTTCCGAGCCCGAGGATA CTTTGCTGGTGAAGGGGTTCGGTATGATCGATCGGGGGCGCGCACTGTGTCGCCGGGATGCCGGCAGCCCGGCGGGGGAG CGATTGATCTGGGAGGGCAATATCTGCCTGCTTCGTCACGAGCAGGTCGATGTGCTTCAGCCGATATTTGACACGCTGAG CGTCGGCGGGCGCATTATGGCTTCGTTCGGCAGCGAGCTCGATTTTTCAGGAGCGCTGTTTCCCGACTCTCGTTTCCGTA CCTCCTTCAGCTTGTTTTACGGTTATCTCGAAACACTTACGGGCCTGAAAAGCGTGGCCAATCCCGACGACCGGTGGCGT TGGGTCGAACAGAGCGTCATCCCCTCATGGCAGGCGGCAGAGCGACAGATGAGCGCGCCGTGCCCGACCAGAAACGCGTT GCAGAAAATGGCTGCCTGTGAGCAGTGA
Upstream 100 bases:
>100_bases ATGTTCTCCTCAAATCCGGTGATGGCATCGTTTTTGGGGACTCCTTGCGAAACACGATAACGGTGAGTTGGAGTTGTAAC CCATTTCACGACAAATATCT
Downstream 100 bases:
>100_bases GCTGCTCATTTACCTCGAAGCGCGGAGTGCAGTGACCGGGTCAAGGCTGGAGGCTTTCCAGGCCGGGAAAAGTCCGAACG AGATGCCGATGACCGAGCAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 275; Mature: 275
Protein sequence:
>275_residues MLRSKEEWQETAESVLPPEERYVDRNRMITARYAGWYLENPGTLKWAGMAAFASRQVGLAIMAADLMTAPERDGSGNPLL ALHRFGVDWFMRADFEQIRRGNNNIYRDIAWAHAAYVGGGMAELEACASEPEDTLLVKGFGMIDRGRALCRRDAGSPAGE RLIWEGNICLLRHEQVDVLQPIFDTLSVGGRIMASFGSELDFSGALFPDSRFRTSFSLFYGYLETLTGLKSVANPDDRWR WVEQSVIPSWQAAERQMSAPCPTRNALQKMAACEQ
Sequences:
>Translated_275_residues MLRSKEEWQETAESVLPPEERYVDRNRMITARYAGWYLENPGTLKWAGMAAFASRQVGLAIMAADLMTAPERDGSGNPLL ALHRFGVDWFMRADFEQIRRGNNNIYRDIAWAHAAYVGGGMAELEACASEPEDTLLVKGFGMIDRGRALCRRDAGSPAGE RLIWEGNICLLRHEQVDVLQPIFDTLSVGGRIMASFGSELDFSGALFPDSRFRTSFSLFYGYLETLTGLKSVANPDDRWR WVEQSVIPSWQAAERQMSAPCPTRNALQKMAACEQ >Mature_275_residues MLRSKEEWQETAESVLPPEERYVDRNRMITARYAGWYLENPGTLKWAGMAAFASRQVGLAIMAADLMTAPERDGSGNPLL ALHRFGVDWFMRADFEQIRRGNNNIYRDIAWAHAAYVGGGMAELEACASEPEDTLLVKGFGMIDRGRALCRRDAGSPAGE RLIWEGNICLLRHEQVDVLQPIFDTLSVGGRIMASFGSELDFSGALFPDSRFRTSFSLFYGYLETLTGLKSVANPDDRWR WVEQSVIPSWQAAERQMSAPCPTRNALQKMAACEQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30868; Mature: 30868
Theoretical pI: Translated: 5.06; Mature: 5.06
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 4.0 %Met (Translated Protein) 5.8 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 4.0 %Met (Mature Protein) 5.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLRSKEEWQETAESVLPPEERYVDRNRMITARYAGWYLENPGTLKWAGMAAFASRQVGLA CCCCHHHHHHHHHHCCCCHHHHCCCCCEEEEEECCEEECCCCCEEEHHHHHHHHHHHHHH IMAADLMTAPERDGSGNPLLALHRFGVDWFMRADFEQIRRGNNNIYRDIAWAHAAYVGGG HHHHHHHCCCCCCCCCCCEEEEEHHCCHHHHHCCHHHHHCCCCCHHHHHHHHHHHHHCCC MAELEACASEPEDTLLVKGFGMIDRGRALCRRDAGSPAGERLIWEGNICLLRHEQVDVLQ HHHHHHHHCCCCCEEEEECCCCHHHHHHHHHHCCCCCCCCEEEEECCEEEEECCHHHHHH PIFDTLSVGGRIMASFGSELDFSGALFPDSRFRTSFSLFYGYLETLTGLKSVANPDDRWR HHHHHHHCCCHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHH WVEQSVIPSWQAAERQMSAPCPTRNALQKMAACEQ HHHHHHCCCHHHHHHHCCCCCCCHHHHHHHHHCCC >Mature Secondary Structure MLRSKEEWQETAESVLPPEERYVDRNRMITARYAGWYLENPGTLKWAGMAAFASRQVGLA CCCCHHHHHHHHHHCCCCHHHHCCCCCEEEEEECCEEECCCCCEEEHHHHHHHHHHHHHH IMAADLMTAPERDGSGNPLLALHRFGVDWFMRADFEQIRRGNNNIYRDIAWAHAAYVGGG HHHHHHHCCCCCCCCCCCEEEEEHHCCHHHHHCCHHHHHCCCCCHHHHHHHHHHHHHCCC MAELEACASEPEDTLLVKGFGMIDRGRALCRRDAGSPAGERLIWEGNICLLRHEQVDVLQ HHHHHHHHCCCCCEEEEECCCCHHHHHHHHHHCCCCCCCCEEEEECCEEEEECCHHHHHH PIFDTLSVGGRIMASFGSELDFSGALFPDSRFRTSFSLFYGYLETLTGLKSVANPDDRWR HHHHHHHCCCHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHH WVEQSVIPSWQAAERQMSAPCPTRNALQKMAACEQ HHHHHHCCCHHHHHHHCCCCCCCHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA