| Definition | Chlorobium tepidum TLS, complete genome. |
|---|---|
| Accession | NC_002932 |
| Length | 2,154,946 |
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The map label for this gene is comA2 [C]
Identifier: 21674141
GI number: 21674141
Start: 1241086
End: 1241535
Strand: Direct
Name: comA2 [C]
Synonym: CT1318
Alternate gene names: 21674141
Gene position: 1241086-1241535 (Clockwise)
Preceding gene: 21674140
Following gene: 21674142
Centisome position: 57.59
GC content: 62.22
Gene sequence:
>450_bases ATGGCACAGGATTCGATTTTCACTGTTCCGGTCACGCCCGAAGAGATCAATGAAACGCAGATCGTTGAAGGACAGATGGC CCGCCATCTTGGCATCGAAATCACCGCTGTCGGCCCTGACTCCATGACGGCCACCATGCCTGTCGATCACCGCACGATCC AGCGCATCGGCATTCTGCACGGCGGCGCCTCGCTCGCCCTTGCCGAAACGGTCGGCAGCATCGCCGCCTCCTACTGCGTG GATCGCGAGAAGCAGTTCATCGTCGGCCAGGAGATCAATGCCAACCACCTCCGCGCCGTGCGCCAGGGCGAAAGCTCCGT GCACGCCACCGCCACCCCGCTCCACCTCGGTCGCACCTCGCAAGTCTGGGACATCAAAATCCGCGACGACAAAGGCCGTC TGGTCTGCGTCAGCCGCTTCACGGCCGCCGTACTTGAAAAACGGGGGTAA
Upstream 100 bases:
>100_bases GTTTGCTTCCCAAGCAAAATGTCGCGAGTTCGAATCTCGTCACCCGCTCTCCGAAAATCTCCGATTCGACTGCACCTCTC CAGACCAACCATTTCTTCCC
Downstream 100 bases:
>100_bases TTGCCCCGGCTTTCAAGCCGAGGGCAGTCAATCAACAAAAAACCGGGCTTCAGCCCAATCTCTTTCCGCCCGCATCCGTA CCCGCTCGTTATCTCGACAA
Product: ComA2 protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 149; Mature: 148
Protein sequence:
>149_residues MAQDSIFTVPVTPEEINETQIVEGQMARHLGIEITAVGPDSMTATMPVDHRTIQRIGILHGGASLALAETVGSIAASYCV DREKQFIVGQEINANHLRAVRQGESSVHATATPLHLGRTSQVWDIKIRDDKGRLVCVSRFTAAVLEKRG
Sequences:
>Translated_149_residues MAQDSIFTVPVTPEEINETQIVEGQMARHLGIEITAVGPDSMTATMPVDHRTIQRIGILHGGASLALAETVGSIAASYCV DREKQFIVGQEINANHLRAVRQGESSVHATATPLHLGRTSQVWDIKIRDDKGRLVCVSRFTAAVLEKRG >Mature_148_residues AQDSIFTVPVTPEEINETQIVEGQMARHLGIEITAVGPDSMTATMPVDHRTIQRIGILHGGASLALAETVGSIAASYCVD REKQFIVGQEINANHLRAVRQGESSVHATATPLHLGRTSQVWDIKIRDDKGRLVCVSRFTAAVLEKRG
Specific function: Unknown
COG id: COG2050
COG function: function code Q; Uncharacterized protein, possibly involved in aromatic compounds catabolism
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the thioesterase PaaI family [H]
Homologues:
Organism=Escherichia coli, GI1787976, Length=140, Percent_Identity=48.5714285714286, Blast_Score=130, Evalue=5e-32, Organism=Escherichia coli, GI1786813, Length=140, Percent_Identity=46.4285714285714, Blast_Score=116, Evalue=5e-28,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003736 - InterPro: IPR006683 [H]
Pfam domain/function: PF03061 4HBT [H]
EC number: NA
Molecular weight: Translated: 16169; Mature: 16037
Theoretical pI: Translated: 6.79; Mature: 6.79
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAQDSIFTVPVTPEEINETQIVEGQMARHLGIEITAVGPDSMTATMPVDHRTIQRIGILH CCCCCEEEEECCHHHCCCEEEEHHHHHHHCCEEEEEECCCCEEEECCCCHHHHHHHHEEE GGASLALAETVGSIAASYCVDREKQFIVGQEINANHLRAVRQGESSVHATATPLHLGRTS CCCHHHHHHHHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHCCCCCEEEEECEEECCCCC QVWDIKIRDDKGRLVCVSRFTAAVLEKRG CEEEEEEECCCCCEEEEHHHHHHHHHCCC >Mature Secondary Structure AQDSIFTVPVTPEEINETQIVEGQMARHLGIEITAVGPDSMTATMPVDHRTIQRIGILH CCCCEEEEECCHHHCCCEEEEHHHHHHHCCEEEEEECCCCEEEECCCCHHHHHHHHEEE GGASLALAETVGSIAASYCVDREKQFIVGQEINANHLRAVRQGESSVHATATPLHLGRTS CCCHHHHHHHHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHCCCCCEEEEECEEECCCCC QVWDIKIRDDKGRLVCVSRFTAAVLEKRG CEEEEEEECCCCCEEEEHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7542800 [H]