| Definition | Chlorobium tepidum TLS, complete genome. |
|---|---|
| Accession | NC_002932 |
| Length | 2,154,946 |
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The map label for this gene is msrA [H]
Identifier: 21674101
GI number: 21674101
Start: 1195645
End: 1196499
Strand: Reverse
Name: msrA [H]
Synonym: CT1278
Alternate gene names: 21674101
Gene position: 1196499-1195645 (Counterclockwise)
Preceding gene: 21674103
Following gene: 21674100
Centisome position: 55.52
GC content: 55.44
Gene sequence:
>855_bases ATGAAATACAAGACGCTCACCCCTGAAGAGAAGCGGGTTATCATCGACAAGGGCACCGAAAGACCATTCAGTGGCAAGTA CTACCTGACCAAGGAGAAGGGGGTGTACCAGTGCAAACAGTGCGGTGCGGATCTTTTCCGGTCGGATGCCAAGTTCGATT CGGGCACCGGCTGGCCGAGTTTCGACGATGCCATTCCGGGTGCGGTCAGGCAGGAGACCGACCGGGACGGAATGAGGATC GAGATTCTCTGTGCCAATTGCGGAGGGCACCTGGGGCATGTTTTCTACAATGAAGGTTTTACCTCAAAAAACGCCCGCTA TTGCGTCAACTCGGTGTCGCTCTCCTTCGAGCCTTCGGACAAGCCTGCTACGGCAACCGAAAAGGCGGTGTTCGCGGGCG GATGCTTCTGGGGCGTCGAGTACCATTTCAAGAAGATGAAAGGAGTGCTTTCGACTACGGTTGGCTACACGGGCGGCAAA ACCGCTCATCCCACCTATGAGCAGGTGTGCAGCGGTCGCACCGGTCATGCCGAGGCGATCGAGGTGGAGTTCGATCCGTC CGTTGTCAGCTACGAGGAGCTGGCAAAGCTCTTTTTCGAGATTCACGACCCGACGCAGGTTGACCGGCAAGGCCCCGATG TTGGCGAACAGTACCGCTCAGCGGTCTTTTACCAGAACGACCAGCAGAAAAAAATAGCCGAGGCGCTGATCGAGCAGCTT AAAAAACGGGGGTACGACGTGGTAACCAGTGTGGAAAAAGGGGGGGAGTTCTGGCCGGCGGAGCTCTACCATCAGGATTA TTACGAAAAGACAGGGCATAAGCCCTACTGCCATATTTATCAGAAGCGGTTTTAA
Upstream 100 bases:
>100_bases TTTATCCATCATTTTGGTTTTACTCCTGGCGAGCTGTAGTGCCGGGTCTGTGGACAAGACTGTTACGGCGCCAGCAACAA CAACCCAGAAGGAGGCTTCA
Downstream 100 bases:
>100_bases GGTGATTAGGGGCGGCTCTTGTGGCTGCCCTGTTTTTTTGTGGGCTTGACATCCCGCTTTTTTTTGTTAAATTATTGGCA TATGCTAATAATTGCTGACT
Product: bifunctional methionine sulfoxide reductase B/A protein
Products: NA
Alternate protein names: Peptide methionine sulfoxide reductase msrB; Peptide-methionine (R)-S-oxide reductase; Peptide methionine sulfoxide reductase msrA; Protein-methionine-S-oxide reductase; Peptide-methionine (S)-S-oxide reductase; Peptide Met(O) reductase [H]
Number of amino acids: Translated: 284; Mature: 284
Protein sequence:
>284_residues MKYKTLTPEEKRVIIDKGTERPFSGKYYLTKEKGVYQCKQCGADLFRSDAKFDSGTGWPSFDDAIPGAVRQETDRDGMRI EILCANCGGHLGHVFYNEGFTSKNARYCVNSVSLSFEPSDKPATATEKAVFAGGCFWGVEYHFKKMKGVLSTTVGYTGGK TAHPTYEQVCSGRTGHAEAIEVEFDPSVVSYEELAKLFFEIHDPTQVDRQGPDVGEQYRSAVFYQNDQQKKIAEALIEQL KKRGYDVVTSVEKGGEFWPAELYHQDYYEKTGHKPYCHIYQKRF
Sequences:
>Translated_284_residues MKYKTLTPEEKRVIIDKGTERPFSGKYYLTKEKGVYQCKQCGADLFRSDAKFDSGTGWPSFDDAIPGAVRQETDRDGMRI EILCANCGGHLGHVFYNEGFTSKNARYCVNSVSLSFEPSDKPATATEKAVFAGGCFWGVEYHFKKMKGVLSTTVGYTGGK TAHPTYEQVCSGRTGHAEAIEVEFDPSVVSYEELAKLFFEIHDPTQVDRQGPDVGEQYRSAVFYQNDQQKKIAEALIEQL KKRGYDVVTSVEKGGEFWPAELYHQDYYEKTGHKPYCHIYQKRF >Mature_284_residues MKYKTLTPEEKRVIIDKGTERPFSGKYYLTKEKGVYQCKQCGADLFRSDAKFDSGTGWPSFDDAIPGAVRQETDRDGMRI EILCANCGGHLGHVFYNEGFTSKNARYCVNSVSLSFEPSDKPATATEKAVFAGGCFWGVEYHFKKMKGVLSTTVGYTGGK TAHPTYEQVCSGRTGHAEAIEVEFDPSVVSYEELAKLFFEIHDPTQVDRQGPDVGEQYRSAVFYQNDQQKKIAEALIEQL KKRGYDVVTSVEKGGEFWPAELYHQDYYEKTGHKPYCHIYQKRF
Specific function: Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine [H]
COG id: COG0225
COG function: function code O; Peptide methionine sulfoxide reductase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: In the C-terminal section; belongs to the msrA Met sulfoxide reductase family [H]
Homologues:
Organism=Homo sapiens, GI6912516, Length=160, Percent_Identity=45.625, Blast_Score=134, Evalue=9e-32, Organism=Homo sapiens, GI208609995, Length=152, Percent_Identity=46.7105263157895, Blast_Score=133, Evalue=2e-31, Organism=Homo sapiens, GI301336164, Length=125, Percent_Identity=48, Blast_Score=115, Evalue=5e-26, Organism=Homo sapiens, GI301336162, Length=125, Percent_Identity=48, Blast_Score=115, Evalue=5e-26, Organism=Homo sapiens, GI73089054, Length=125, Percent_Identity=48, Blast_Score=115, Evalue=5e-26, Organism=Homo sapiens, GI37620216, Length=125, Percent_Identity=48, Blast_Score=114, Evalue=7e-26, Organism=Homo sapiens, GI117606353, Length=125, Percent_Identity=44.8, Blast_Score=102, Evalue=3e-22, Organism=Homo sapiens, GI208609993, Length=110, Percent_Identity=41.8181818181818, Blast_Score=79, Evalue=4e-15, Organism=Homo sapiens, GI7706511, Length=99, Percent_Identity=36.3636363636364, Blast_Score=67, Evalue=2e-11, Organism=Escherichia coli, GI1790665, Length=171, Percent_Identity=43.859649122807, Blast_Score=140, Evalue=8e-35, Organism=Escherichia coli, GI1788077, Length=116, Percent_Identity=47.4137931034483, Blast_Score=95, Evalue=7e-21, Organism=Caenorhabditis elegans, GI17533973, Length=142, Percent_Identity=40.1408450704225, Blast_Score=106, Evalue=1e-23, Organism=Caenorhabditis elegans, GI17553450, Length=124, Percent_Identity=41.9354838709677, Blast_Score=96, Evalue=3e-20, Organism=Caenorhabditis elegans, GI115532676, Length=124, Percent_Identity=41.9354838709677, Blast_Score=96, Evalue=3e-20, Organism=Saccharomyces cerevisiae, GI6319816, Length=120, Percent_Identity=48.3333333333333, Blast_Score=113, Evalue=4e-26, Organism=Saccharomyces cerevisiae, GI6320881, Length=151, Percent_Identity=37.7483443708609, Blast_Score=106, Evalue=5e-24, Organism=Drosophila melanogaster, GI45553335, Length=127, Percent_Identity=46.4566929133858, Blast_Score=110, Evalue=1e-24, Organism=Drosophila melanogaster, GI21356369, Length=127, Percent_Identity=46.4566929133858, Blast_Score=110, Evalue=1e-24, Organism=Drosophila melanogaster, GI24645799, Length=127, Percent_Identity=46.4566929133858, Blast_Score=109, Evalue=2e-24, Organism=Drosophila melanogaster, GI221378664, Length=126, Percent_Identity=46.8253968253968, Blast_Score=109, Evalue=3e-24, Organism=Drosophila melanogaster, GI221378662, Length=133, Percent_Identity=44.3609022556391, Blast_Score=106, Evalue=1e-23, Organism=Drosophila melanogaster, GI24645804, Length=138, Percent_Identity=42.7536231884058, Blast_Score=105, Evalue=3e-23, Organism=Drosophila melanogaster, GI24645801, Length=138, Percent_Identity=42.7536231884058, Blast_Score=105, Evalue=4e-23, Organism=Drosophila melanogaster, GI24664627, Length=166, Percent_Identity=35.5421686746988, Blast_Score=104, Evalue=5e-23, Organism=Drosophila melanogaster, GI24664631, Length=166, Percent_Identity=34.9397590361446, Blast_Score=100, Evalue=1e-21, Organism=Drosophila melanogaster, GI45553131, Length=146, Percent_Identity=37.6712328767123, Blast_Score=99, Evalue=2e-21,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002579 - InterPro: IPR011057 - InterPro: IPR002569 [H]
Pfam domain/function: PF01625 PMSR; PF01641 SelR [H]
EC number: =1.8.4.12; =1.8.4.11 [H]
Molecular weight: Translated: 32160; Mature: 32160
Theoretical pI: Translated: 6.78; Mature: 6.78
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.8 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 2.8 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKYKTLTPEEKRVIIDKGTERPFSGKYYLTKEKGVYQCKQCGADLFRSDAKFDSGTGWPS CCCCCCCCCCCEEEEECCCCCCCCCCEEEECCCCHHHHHHHHHHHHHCCCCCCCCCCCCC FDDAIPGAVRQETDRDGMRIEILCANCGGHLGHVFYNEGFTSKNARYCVNSVSLSFEPSD CHHCCCCHHHHCCCCCCCEEEEEEECCCCCCCEEEECCCCCCCCCCEEEEEEEEEECCCC KPATATEKAVFAGGCFWGVEYHFKKMKGVLSTTVGYTGGKTAHPTYEQVCSGRTGHAEAI CCCCCHHHHEEECCEEEHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHCCCCCCCEEE EVEFDPSVVSYEELAKLFFEIHDPTQVDRQGPDVGEQYRSAVFYQNDQQKKIAEALIEQL EEEECCCEECHHHHHHHHHHCCCCCHHCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHH KKRGYDVVTSVEKGGEFWPAELYHQDYYEKTGHKPYCHIYQKRF HHCCCEEEEHHHCCCCCCCHHHHHHHHHHHCCCCCEEHHHCCCC >Mature Secondary Structure MKYKTLTPEEKRVIIDKGTERPFSGKYYLTKEKGVYQCKQCGADLFRSDAKFDSGTGWPS CCCCCCCCCCCEEEEECCCCCCCCCCEEEECCCCHHHHHHHHHHHHHCCCCCCCCCCCCC FDDAIPGAVRQETDRDGMRIEILCANCGGHLGHVFYNEGFTSKNARYCVNSVSLSFEPSD CHHCCCCHHHHCCCCCCCEEEEEEECCCCCCCEEEECCCCCCCCCCEEEEEEEEEECCCC KPATATEKAVFAGGCFWGVEYHFKKMKGVLSTTVGYTGGKTAHPTYEQVCSGRTGHAEAI CCCCCHHHHEEECCEEEHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHCCCCCCCEEE EVEFDPSVVSYEELAKLFFEIHDPTQVDRQGPDVGEQYRSAVFYQNDQQKKIAEALIEQL EEEECCCEECHHHHHHHHHHCCCCCHHCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHH KKRGYDVVTSVEKGGEFWPAELYHQDYYEKTGHKPYCHIYQKRF HHCCCEEEEHHHCCCCCCCHHHHHHHHHHHCCCCCEEHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9665876 [H]