Definition Chlorobium tepidum TLS, complete genome.
Accession NC_002932
Length 2,154,946

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The map label for this gene is 21674095

Identifier: 21674095

GI number: 21674095

Start: 1191182

End: 1191736

Strand: Direct

Name: 21674095

Synonym: CT1272

Alternate gene names: NA

Gene position: 1191182-1191736 (Clockwise)

Preceding gene: 21674094

Following gene: 21674097

Centisome position: 55.28

GC content: 59.46

Gene sequence:

>555_bases
ATGATCCGCTCAGTCACCGTCTATTGCAGCTCCAGCAACCTTGCTCCGGAACCCTATTTCAGCGAAGCCGAATCGCTTGG
CCGCGGCCTTGCCGAACGCGGAATTGATCTGGTCTTCGGTGGTGGGCACGTCGGGCTGATGGGACGCACCGCCGACGCAG
CTCTGAAGGCTGGCGGCACGGTGAAGGGCATCATCCCGCGCTTCCTCGAAGAGCGCGAGGTAGCTCACCCCGGACTGACC
GAGCTGCACGTGGTTGAAACCATGCACCAGCGCAAAATGCTGCTCACCGACTGGGCGGACGCCTTCGTGATTTTGCCGGG
CGGACTCGGCACACTCGATGAGTTGATGGAAATCCTCACCTGGAAGCACCTCGGCCAGCACCGAAAACCGATCATCCTGC
TCAACACGGAGGGCTTTTGGAATCAGCTCCTACAGTTCTTCGAACGCATCGCCGCCGAAAAGATGGTCAAGCCTGGTTAC
GAAAGCTACTACGACATCTGCAACTCCGCCAGCGACGTGCTTGCGATGATCGACCGCCAAAACACCAGCGTCTGA

Upstream 100 bases:

>100_bases
CCGCGCGAAGTCACAAAGTCCTGAAAATCGACCAGCCGGTGAGCTACATCTACCGCCGCTCACCCGGCAGCATCACCAGA
ACCTACAAACCAGCCAAGCC

Downstream 100 bases:

>100_bases
AAAAATTCAAAGCGAAAAAAAGAAAGGCCGGAACGTCAACTCCCGGCCTTTTCTGTTTCAAGCTGTCCGCACTCAGCGCT
AAGCCGGCGGCACGTTGTCG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 184; Mature: 184

Protein sequence:

>184_residues
MIRSVTVYCSSSNLAPEPYFSEAESLGRGLAERGIDLVFGGGHVGLMGRTADAALKAGGTVKGIIPRFLEEREVAHPGLT
ELHVVETMHQRKMLLTDWADAFVILPGGLGTLDELMEILTWKHLGQHRKPIILLNTEGFWNQLLQFFERIAAEKMVKPGY
ESYYDICNSASDVLAMIDRQNTSV

Sequences:

>Translated_184_residues
MIRSVTVYCSSSNLAPEPYFSEAESLGRGLAERGIDLVFGGGHVGLMGRTADAALKAGGTVKGIIPRFLEEREVAHPGLT
ELHVVETMHQRKMLLTDWADAFVILPGGLGTLDELMEILTWKHLGQHRKPIILLNTEGFWNQLLQFFERIAAEKMVKPGY
ESYYDICNSASDVLAMIDRQNTSV
>Mature_184_residues
MIRSVTVYCSSSNLAPEPYFSEAESLGRGLAERGIDLVFGGGHVGLMGRTADAALKAGGTVKGIIPRFLEEREVAHPGLT
ELHVVETMHQRKMLLTDWADAFVILPGGLGTLDELMEILTWKHLGQHRKPIILLNTEGFWNQLLQFFERIAAEKMVKPGY
ESYYDICNSASDVLAMIDRQNTSV

Specific function: Unknown

COG id: COG1611

COG function: function code R; Predicted Rossmann fold nucleotide-binding protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the LOG family [H]

Homologues:

Organism=Saccharomyces cerevisiae, GI6322406, Length=203, Percent_Identity=35.4679802955665, Blast_Score=122, Evalue=5e-29,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005269 [H]

Pfam domain/function: PF03641 Lysine_decarbox [H]

EC number: NA

Molecular weight: Translated: 20406; Mature: 20406

Theoretical pI: Translated: 5.58; Mature: 5.58

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIRSVTVYCSSSNLAPEPYFSEAESLGRGLAERGIDLVFGGGHVGLMGRTADAALKAGGT
CCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHCCCEEEECCCEEEEECCCHHHHHHCCCC
VKGIIPRFLEEREVAHPGLTELHVVETMHQRKMLLTDWADAFVILPGGLGTLDELMEILT
HHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCEEEEECCCCCCHHHHHHHHH
WKHLGQHRKPIILLNTEGFWNQLLQFFERIAAEKMVKPGYESYYDICNSASDVLAMIDRQ
HHHHCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCHHHHHHHHHCC
NTSV
CCCC
>Mature Secondary Structure
MIRSVTVYCSSSNLAPEPYFSEAESLGRGLAERGIDLVFGGGHVGLMGRTADAALKAGGT
CCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHCCCEEEECCCEEEEECCCHHHHHHCCCC
VKGIIPRFLEEREVAHPGLTELHVVETMHQRKMLLTDWADAFVILPGGLGTLDELMEILT
HHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCEEEEECCCCCCHHHHHHHHH
WKHLGQHRKPIILLNTEGFWNQLLQFFERIAAEKMVKPGYESYYDICNSASDVLAMIDRQ
HHHHCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCHHHHHHHHHCC
NTSV
CCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10984043; 2116366 [H]