| Definition | Chlorobium tepidum TLS, complete genome. |
|---|---|
| Accession | NC_002932 |
| Length | 2,154,946 |
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The map label for this gene is 21674095
Identifier: 21674095
GI number: 21674095
Start: 1191182
End: 1191736
Strand: Direct
Name: 21674095
Synonym: CT1272
Alternate gene names: NA
Gene position: 1191182-1191736 (Clockwise)
Preceding gene: 21674094
Following gene: 21674097
Centisome position: 55.28
GC content: 59.46
Gene sequence:
>555_bases ATGATCCGCTCAGTCACCGTCTATTGCAGCTCCAGCAACCTTGCTCCGGAACCCTATTTCAGCGAAGCCGAATCGCTTGG CCGCGGCCTTGCCGAACGCGGAATTGATCTGGTCTTCGGTGGTGGGCACGTCGGGCTGATGGGACGCACCGCCGACGCAG CTCTGAAGGCTGGCGGCACGGTGAAGGGCATCATCCCGCGCTTCCTCGAAGAGCGCGAGGTAGCTCACCCCGGACTGACC GAGCTGCACGTGGTTGAAACCATGCACCAGCGCAAAATGCTGCTCACCGACTGGGCGGACGCCTTCGTGATTTTGCCGGG CGGACTCGGCACACTCGATGAGTTGATGGAAATCCTCACCTGGAAGCACCTCGGCCAGCACCGAAAACCGATCATCCTGC TCAACACGGAGGGCTTTTGGAATCAGCTCCTACAGTTCTTCGAACGCATCGCCGCCGAAAAGATGGTCAAGCCTGGTTAC GAAAGCTACTACGACATCTGCAACTCCGCCAGCGACGTGCTTGCGATGATCGACCGCCAAAACACCAGCGTCTGA
Upstream 100 bases:
>100_bases CCGCGCGAAGTCACAAAGTCCTGAAAATCGACCAGCCGGTGAGCTACATCTACCGCCGCTCACCCGGCAGCATCACCAGA ACCTACAAACCAGCCAAGCC
Downstream 100 bases:
>100_bases AAAAATTCAAAGCGAAAAAAAGAAAGGCCGGAACGTCAACTCCCGGCCTTTTCTGTTTCAAGCTGTCCGCACTCAGCGCT AAGCCGGCGGCACGTTGTCG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 184; Mature: 184
Protein sequence:
>184_residues MIRSVTVYCSSSNLAPEPYFSEAESLGRGLAERGIDLVFGGGHVGLMGRTADAALKAGGTVKGIIPRFLEEREVAHPGLT ELHVVETMHQRKMLLTDWADAFVILPGGLGTLDELMEILTWKHLGQHRKPIILLNTEGFWNQLLQFFERIAAEKMVKPGY ESYYDICNSASDVLAMIDRQNTSV
Sequences:
>Translated_184_residues MIRSVTVYCSSSNLAPEPYFSEAESLGRGLAERGIDLVFGGGHVGLMGRTADAALKAGGTVKGIIPRFLEEREVAHPGLT ELHVVETMHQRKMLLTDWADAFVILPGGLGTLDELMEILTWKHLGQHRKPIILLNTEGFWNQLLQFFERIAAEKMVKPGY ESYYDICNSASDVLAMIDRQNTSV >Mature_184_residues MIRSVTVYCSSSNLAPEPYFSEAESLGRGLAERGIDLVFGGGHVGLMGRTADAALKAGGTVKGIIPRFLEEREVAHPGLT ELHVVETMHQRKMLLTDWADAFVILPGGLGTLDELMEILTWKHLGQHRKPIILLNTEGFWNQLLQFFERIAAEKMVKPGY ESYYDICNSASDVLAMIDRQNTSV
Specific function: Unknown
COG id: COG1611
COG function: function code R; Predicted Rossmann fold nucleotide-binding protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the LOG family [H]
Homologues:
Organism=Saccharomyces cerevisiae, GI6322406, Length=203, Percent_Identity=35.4679802955665, Blast_Score=122, Evalue=5e-29,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005269 [H]
Pfam domain/function: PF03641 Lysine_decarbox [H]
EC number: NA
Molecular weight: Translated: 20406; Mature: 20406
Theoretical pI: Translated: 5.58; Mature: 5.58
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIRSVTVYCSSSNLAPEPYFSEAESLGRGLAERGIDLVFGGGHVGLMGRTADAALKAGGT CCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHCCCEEEECCCEEEEECCCHHHHHHCCCC VKGIIPRFLEEREVAHPGLTELHVVETMHQRKMLLTDWADAFVILPGGLGTLDELMEILT HHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCEEEEECCCCCCHHHHHHHHH WKHLGQHRKPIILLNTEGFWNQLLQFFERIAAEKMVKPGYESYYDICNSASDVLAMIDRQ HHHHCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCHHHHHHHHHCC NTSV CCCC >Mature Secondary Structure MIRSVTVYCSSSNLAPEPYFSEAESLGRGLAERGIDLVFGGGHVGLMGRTADAALKAGGT CCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHCCCEEEECCCEEEEECCCHHHHHHCCCC VKGIIPRFLEEREVAHPGLTELHVVETMHQRKMLLTDWADAFVILPGGLGTLDELMEILT HHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCEEEEECCCCCCHHHHHHHHH WKHLGQHRKPIILLNTEGFWNQLLQFFERIAAEKMVKPGYESYYDICNSASDVLAMIDRQ HHHHCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCHHHHHHHHHCC NTSV CCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 10984043; 2116366 [H]