| Definition | Chlorobium tepidum TLS, complete genome. |
|---|---|
| Accession | NC_002932 |
| Length | 2,154,946 |
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The map label for this gene is phoH [H]
Identifier: 21674082
GI number: 21674082
Start: 1182958
End: 1183947
Strand: Direct
Name: phoH [H]
Synonym: CT1259
Alternate gene names: 21674082
Gene position: 1182958-1183947 (Clockwise)
Preceding gene: 21674081
Following gene: 21674083
Centisome position: 54.9
GC content: 56.46
Gene sequence:
>990_bases TTGACTGAAAAAACGATCGAATTCGAAGGGATCGAACCCGTCATCATTTTCGGGCCATACGACAGCTATCTAAAAAAAGT TCGTGAAGCGTTCCCCGACATTCGGATCAACGCGCGAGGCGCGAAAATCACCATCGGCGGTGACGAACCTGACCTGACGG CCATCGAAAAGATTTTCAGGGAGATCATCTTCCTGGCCGACCAGCACGGTGAAGTGCTGGAAAACGATGTCAACGCACTC GTCAGTCTGGCGCTCTCACCAGTCTCCCACCCTTCCGCAGCCCTTTCCGGAGACAAGGACGTAATTGTCGAAACAAAAGA TTACGTCGTCAAGGCCAAAACCGACGGGCAACGTCGGATGGTCGCCGAAGCCGCCGGAAATGATATCGTCTTCGCCATCG GCCCGGCAGGCACGGGAAAGACTTACACTGCTGTCGCCATCGCGGTGGCCGCGTGGAAAGCGAAAAAAATCAAACGCATC GTGCTTGCGCGCCCGGCGGTTGAGGCAGGCGAGAGCCTTGGATTCCTGCCCGGCGACCTTGCCCAGAAGATCGACCCGTA CCTGAGGCCGCTCTACGACGCGCTCCAGGACATGCTGACCGCCGAAAAGCTCAAGTTCCTCACTGAGCGCCGGGTGATCG AAATCGTGCCGCTTGCCTACATGCGCGGACGCACGCTGAACAACTCGTTCATCATCCTCGACGAGGCCCAGAACGCTTCG AGCAAGCAGATGATGATGTGCCTGACAAGGCTCGGGGTCAACTCGAAAGCGATCATCACCGGCGACGTCACCCAGGTTGA CCTGCCGAAAGAGATGGAGTCGGGACTGATGAACGCCCAGAAAATCCTCAAGGGGATCAAAGGCATCAGCTTCGTTTTTC TCGACAAGTCGGATGTGGTACGCCATCGCCTCGTCAAGGATATCATCAACGCCTACGAACATCACGAAGAGGGGCTGCGA AAGGGCGCTCCAAAAGAGGCGGAACTTTGA
Upstream 100 bases:
>100_bases AGAGGGAGTGCGAGATTATGTGCAGAACTATCTGAGCAAACCCTCGCCGCATCTTGATACATTGGCTTTTGAACGGCAAT AACAAACCGGGAAAAAACTT
Downstream 100 bases:
>100_bases CTTTCACGCTCAGGTTTTAACAGTTGCAGAGTAATCCCTCCTTCGGGAGGTATCTGTTCACAATGGTACAGATAAAAAAA TCTACTCTGATTTCATTACG
Product: PhoH family protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 329; Mature: 328
Protein sequence:
>329_residues MTEKTIEFEGIEPVIIFGPYDSYLKKVREAFPDIRINARGAKITIGGDEPDLTAIEKIFREIIFLADQHGEVLENDVNAL VSLALSPVSHPSAALSGDKDVIVETKDYVVKAKTDGQRRMVAEAAGNDIVFAIGPAGTGKTYTAVAIAVAAWKAKKIKRI VLARPAVEAGESLGFLPGDLAQKIDPYLRPLYDALQDMLTAEKLKFLTERRVIEIVPLAYMRGRTLNNSFIILDEAQNAS SKQMMMCLTRLGVNSKAIITGDVTQVDLPKEMESGLMNAQKILKGIKGISFVFLDKSDVVRHRLVKDIINAYEHHEEGLR KGAPKEAEL
Sequences:
>Translated_329_residues MTEKTIEFEGIEPVIIFGPYDSYLKKVREAFPDIRINARGAKITIGGDEPDLTAIEKIFREIIFLADQHGEVLENDVNAL VSLALSPVSHPSAALSGDKDVIVETKDYVVKAKTDGQRRMVAEAAGNDIVFAIGPAGTGKTYTAVAIAVAAWKAKKIKRI VLARPAVEAGESLGFLPGDLAQKIDPYLRPLYDALQDMLTAEKLKFLTERRVIEIVPLAYMRGRTLNNSFIILDEAQNAS SKQMMMCLTRLGVNSKAIITGDVTQVDLPKEMESGLMNAQKILKGIKGISFVFLDKSDVVRHRLVKDIINAYEHHEEGLR KGAPKEAEL >Mature_328_residues TEKTIEFEGIEPVIIFGPYDSYLKKVREAFPDIRINARGAKITIGGDEPDLTAIEKIFREIIFLADQHGEVLENDVNALV SLALSPVSHPSAALSGDKDVIVETKDYVVKAKTDGQRRMVAEAAGNDIVFAIGPAGTGKTYTAVAIAVAAWKAKKIKRIV LARPAVEAGESLGFLPGDLAQKIDPYLRPLYDALQDMLTAEKLKFLTERRVIEIVPLAYMRGRTLNNSFIILDEAQNASS KQMMMCLTRLGVNSKAIITGDVTQVDLPKEMESGLMNAQKILKGIKGISFVFLDKSDVVRHRLVKDIINAYEHHEEGLRK GAPKEAEL
Specific function: Unknown
COG id: COG1702
COG function: function code T; Phosphate starvation-inducible protein PhoH, predicted ATPase
Gene ontology:
Cell location: Cytoplasm (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the phoH family [H]
Homologues:
Organism=Escherichia coli, GI145693103, Length=310, Percent_Identity=48.7096774193548, Blast_Score=263, Evalue=1e-71, Organism=Escherichia coli, GI1787257, Length=203, Percent_Identity=41.871921182266, Blast_Score=169, Evalue=3e-43,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003714 [H]
Pfam domain/function: PF02562 PhoH [H]
EC number: NA
Molecular weight: Translated: 36188; Mature: 36057
Theoretical pI: Translated: 6.70; Mature: 6.70
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTEKTIEFEGIEPVIIFGPYDSYLKKVREAFPDIRINARGAKITIGGDEPDLTAIEKIFR CCCCEEEECCCCEEEEECCHHHHHHHHHHHCCCCEEECCCCEEEECCCCCCHHHHHHHHH EIIFLADQHGEVLENDVNALVSLALSPVSHPSAALSGDKDVIVETKDYVVKAKTDGQRRM HHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCHHCCCCCCEEEECCCEEEEECCCCHHHH VAEAAGNDIVFAIGPAGTGKTYTAVAIAVAAWKAKKIKRIVLARPAVEAGESLGFLPGDL HHHHCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHCCCCCCCCCCHH AQKIDPYLRPLYDALQDMLTAEKLKFLTERRVIEIVPLAYMRGRTLNNSFIILDEAQNAS HHHHCHHHHHHHHHHHHHHHHHHHHHHHHCCHHEEECHHHHCCCCCCCCEEEEECCCCCC SKQMMMCLTRLGVNSKAIITGDVTQVDLPKEMESGLMNAQKILKGIKGISFVFLDKSDVV HHHHHHHHHHHCCCCCEEEECCCEEECCCHHHHHHHHHHHHHHHHCCCCEEEEECCHHHH RHRLVKDIINAYEHHEEGLRKGAPKEAEL HHHHHHHHHHHHHHHHHHHHCCCCCCCCC >Mature Secondary Structure TEKTIEFEGIEPVIIFGPYDSYLKKVREAFPDIRINARGAKITIGGDEPDLTAIEKIFR CCCEEEECCCCEEEEECCHHHHHHHHHHHCCCCEEECCCCEEEECCCCCCHHHHHHHHH EIIFLADQHGEVLENDVNALVSLALSPVSHPSAALSGDKDVIVETKDYVVKAKTDGQRRM HHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCHHCCCCCCEEEECCCEEEEECCCCHHHH VAEAAGNDIVFAIGPAGTGKTYTAVAIAVAAWKAKKIKRIVLARPAVEAGESLGFLPGDL HHHHCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHCCCCCCCCCCHH AQKIDPYLRPLYDALQDMLTAEKLKFLTERRVIEIVPLAYMRGRTLNNSFIILDEAQNAS HHHHCHHHHHHHHHHHHHHHHHHHHHHHHCCHHEEECHHHHCCCCCCCCEEEEECCCCCC SKQMMMCLTRLGVNSKAIITGDVTQVDLPKEMESGLMNAQKILKGIKGISFVFLDKSDVV HHHHHHHHHHHCCCCCEEEECCCEEECCCHHHHHHHHHHHHHHHHCCCCEEEEECCHHHH RHRLVKDIINAYEHHEEGLRKGAPKEAEL HHHHHHHHHHHHHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8969508; 9384377 [H]