Definition Chlorobium tepidum TLS, complete genome.
Accession NC_002932
Length 2,154,946

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The map label for this gene is 21674060

Identifier: 21674060

GI number: 21674060

Start: 1160282

End: 1160851

Strand: Reverse

Name: 21674060

Synonym: CT1237

Alternate gene names: NA

Gene position: 1160851-1160282 (Counterclockwise)

Preceding gene: 21674061

Following gene: 21674059

Centisome position: 53.87

GC content: 52.98

Gene sequence:

>570_bases
TTGAGCGTTATCTTGTCAGTCGATCCGCTTTTTCAGTCAACCAGCATAAGGGAACCTTCGATGACACCCAAACAAAACAA
CCATCCTCTGGCCCTGGCGCTCTTTTCGTTGCTCAGCGCTCTTCTGGTGGGTCATGCCATCTACCACTACGTCATCCTGC
CCGAAGAGATCGCTACCCATTTCGGCTTTTCGGGAAAACCGGATGCCTGGGGCCCGAAAACGGTCTTTTTCCTCTGGTAC
TTCATCATTACCGGTCTTTGCATTGTAATGTTCGTTGTGGTGAACCGCCTCCTGAGGCCGGGCCATCTTTCATGGCTGAA
CATTCCCAACAAGGAGTACTGGCTGGCGCCGGAACGCATTCACGACACCCTGCATTATGTCAGAAGCGGTATGCTGCTCT
TCGGTTCCGGCACTCTGCTGTTCGTGCTCGACTTCATCAACCAGTCCTTTCAGGTTTCACTCGGAAACGCTTCGAGGCTC
GATCATCCCCTGACCACTCTTGCCATGTATCTGCTTTTCTGCGTCTTATGGGTTTCCGCGCTGTACCGCCGGTTTGGCAG
GAAGATGTGA

Upstream 100 bases:

>100_bases
ACAATCCTCATTGCATCGGTAGTCCCGGTTATTTCAGGAAGCTTTCCCATCGTTTCCCCTGCGCGCCCTTGTCAATTTTT
CCAACAGCAAGCTTTTTGCG

Downstream 100 bases:

>100_bases
GCCCGGAGACGTTGCCGATCAGGGAAACGGCCGGGAAGAGATACCGCAAGGCTTGTTACTGCGGTTCAATGTCTCGAGTT
TGTTTAATTTTGAGCATGAG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 189; Mature: 188

Protein sequence:

>189_residues
MSVILSVDPLFQSTSIREPSMTPKQNNHPLALALFSLLSALLVGHAIYHYVILPEEIATHFGFSGKPDAWGPKTVFFLWY
FIITGLCIVMFVVVNRLLRPGHLSWLNIPNKEYWLAPERIHDTLHYVRSGMLLFGSGTLLFVLDFINQSFQVSLGNASRL
DHPLTTLAMYLLFCVLWVSALYRRFGRKM

Sequences:

>Translated_189_residues
MSVILSVDPLFQSTSIREPSMTPKQNNHPLALALFSLLSALLVGHAIYHYVILPEEIATHFGFSGKPDAWGPKTVFFLWY
FIITGLCIVMFVVVNRLLRPGHLSWLNIPNKEYWLAPERIHDTLHYVRSGMLLFGSGTLLFVLDFINQSFQVSLGNASRL
DHPLTTLAMYLLFCVLWVSALYRRFGRKM
>Mature_188_residues
SVILSVDPLFQSTSIREPSMTPKQNNHPLALALFSLLSALLVGHAIYHYVILPEEIATHFGFSGKPDAWGPKTVFFLWYF
IITGLCIVMFVVVNRLLRPGHLSWLNIPNKEYWLAPERIHDTLHYVRSGMLLFGSGTLLFVLDFINQSFQVSLGNASRLD
HPLTTLAMYLLFCVLWVSALYRRFGRKM

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 21585; Mature: 21454

Theoretical pI: Translated: 9.40; Mature: 9.40

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSVILSVDPLFQSTSIREPSMTPKQNNHPLALALFSLLSALLVGHAIYHYVILPEEIATH
CCEEEECCCHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHH
FGFSGKPDAWGPKTVFFLWYFIITGLCIVMFVVVNRLLRPGHLSWLNIPNKEYWLAPERI
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCEECCHHHH
HDTLHYVRSGMLLFGSGTLLFVLDFINQSFQVSLGNASRLDHPLTTLAMYLLFCVLWVSA
HHHHHHHHCCCCEEECCHHHHHHHHHCCCEEEECCCCCCCCCCHHHHHHHHHHHHHHHHH
LYRRFGRKM
HHHHHCCCC
>Mature Secondary Structure 
SVILSVDPLFQSTSIREPSMTPKQNNHPLALALFSLLSALLVGHAIYHYVILPEEIATH
CEEEECCCHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHH
FGFSGKPDAWGPKTVFFLWYFIITGLCIVMFVVVNRLLRPGHLSWLNIPNKEYWLAPERI
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCEECCHHHH
HDTLHYVRSGMLLFGSGTLLFVLDFINQSFQVSLGNASRLDHPLTTLAMYLLFCVLWVSA
HHHHHHHHCCCCEEECCHHHHHHHHHCCCEEEECCCCCCCCCCHHHHHHHHHHHHHHHHH
LYRRFGRKM
HHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA