| Definition | Chlorobium tepidum TLS, complete genome. |
|---|---|
| Accession | NC_002932 |
| Length | 2,154,946 |
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The map label for this gene is 21674060
Identifier: 21674060
GI number: 21674060
Start: 1160282
End: 1160851
Strand: Reverse
Name: 21674060
Synonym: CT1237
Alternate gene names: NA
Gene position: 1160851-1160282 (Counterclockwise)
Preceding gene: 21674061
Following gene: 21674059
Centisome position: 53.87
GC content: 52.98
Gene sequence:
>570_bases TTGAGCGTTATCTTGTCAGTCGATCCGCTTTTTCAGTCAACCAGCATAAGGGAACCTTCGATGACACCCAAACAAAACAA CCATCCTCTGGCCCTGGCGCTCTTTTCGTTGCTCAGCGCTCTTCTGGTGGGTCATGCCATCTACCACTACGTCATCCTGC CCGAAGAGATCGCTACCCATTTCGGCTTTTCGGGAAAACCGGATGCCTGGGGCCCGAAAACGGTCTTTTTCCTCTGGTAC TTCATCATTACCGGTCTTTGCATTGTAATGTTCGTTGTGGTGAACCGCCTCCTGAGGCCGGGCCATCTTTCATGGCTGAA CATTCCCAACAAGGAGTACTGGCTGGCGCCGGAACGCATTCACGACACCCTGCATTATGTCAGAAGCGGTATGCTGCTCT TCGGTTCCGGCACTCTGCTGTTCGTGCTCGACTTCATCAACCAGTCCTTTCAGGTTTCACTCGGAAACGCTTCGAGGCTC GATCATCCCCTGACCACTCTTGCCATGTATCTGCTTTTCTGCGTCTTATGGGTTTCCGCGCTGTACCGCCGGTTTGGCAG GAAGATGTGA
Upstream 100 bases:
>100_bases ACAATCCTCATTGCATCGGTAGTCCCGGTTATTTCAGGAAGCTTTCCCATCGTTTCCCCTGCGCGCCCTTGTCAATTTTT CCAACAGCAAGCTTTTTGCG
Downstream 100 bases:
>100_bases GCCCGGAGACGTTGCCGATCAGGGAAACGGCCGGGAAGAGATACCGCAAGGCTTGTTACTGCGGTTCAATGTCTCGAGTT TGTTTAATTTTGAGCATGAG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 189; Mature: 188
Protein sequence:
>189_residues MSVILSVDPLFQSTSIREPSMTPKQNNHPLALALFSLLSALLVGHAIYHYVILPEEIATHFGFSGKPDAWGPKTVFFLWY FIITGLCIVMFVVVNRLLRPGHLSWLNIPNKEYWLAPERIHDTLHYVRSGMLLFGSGTLLFVLDFINQSFQVSLGNASRL DHPLTTLAMYLLFCVLWVSALYRRFGRKM
Sequences:
>Translated_189_residues MSVILSVDPLFQSTSIREPSMTPKQNNHPLALALFSLLSALLVGHAIYHYVILPEEIATHFGFSGKPDAWGPKTVFFLWY FIITGLCIVMFVVVNRLLRPGHLSWLNIPNKEYWLAPERIHDTLHYVRSGMLLFGSGTLLFVLDFINQSFQVSLGNASRL DHPLTTLAMYLLFCVLWVSALYRRFGRKM >Mature_188_residues SVILSVDPLFQSTSIREPSMTPKQNNHPLALALFSLLSALLVGHAIYHYVILPEEIATHFGFSGKPDAWGPKTVFFLWYF IITGLCIVMFVVVNRLLRPGHLSWLNIPNKEYWLAPERIHDTLHYVRSGMLLFGSGTLLFVLDFINQSFQVSLGNASRLD HPLTTLAMYLLFCVLWVSALYRRFGRKM
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21585; Mature: 21454
Theoretical pI: Translated: 9.40; Mature: 9.40
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSVILSVDPLFQSTSIREPSMTPKQNNHPLALALFSLLSALLVGHAIYHYVILPEEIATH CCEEEECCCHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHH FGFSGKPDAWGPKTVFFLWYFIITGLCIVMFVVVNRLLRPGHLSWLNIPNKEYWLAPERI CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCEECCHHHH HDTLHYVRSGMLLFGSGTLLFVLDFINQSFQVSLGNASRLDHPLTTLAMYLLFCVLWVSA HHHHHHHHCCCCEEECCHHHHHHHHHCCCEEEECCCCCCCCCCHHHHHHHHHHHHHHHHH LYRRFGRKM HHHHHCCCC >Mature Secondary Structure SVILSVDPLFQSTSIREPSMTPKQNNHPLALALFSLLSALLVGHAIYHYVILPEEIATH CEEEECCCHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHH FGFSGKPDAWGPKTVFFLWYFIITGLCIVMFVVVNRLLRPGHLSWLNIPNKEYWLAPERI CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCEECCHHHH HDTLHYVRSGMLLFGSGTLLFVLDFINQSFQVSLGNASRLDHPLTTLAMYLLFCVLWVSA HHHHHHHHCCCCEEECCHHHHHHHHHCCCEEEECCCCCCCCCCHHHHHHHHHHHHHHHHH LYRRFGRKM HHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA