Definition Chlorobium tepidum TLS, complete genome.
Accession NC_002932
Length 2,154,946

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The map label for this gene is 21674056

Identifier: 21674056

GI number: 21674056

Start: 1156549

End: 1157748

Strand: Reverse

Name: 21674056

Synonym: CT1232

Alternate gene names: NA

Gene position: 1157748-1156549 (Counterclockwise)

Preceding gene: 21674057

Following gene: 21674054

Centisome position: 53.73

GC content: 59.83

Gene sequence:

>1200_bases
ATGCAGCGTTACGATGCAGTGATTTCGGGAGCCGGGCCGGCGGGATGCTCGGCGGCGCTCTCTCTCGCACAAAAGGGCCG
TCGCGTGTTGCTCATCGACAAGGCGCGGTTTCCGAGAGAGAAGATTTGCGGCGACGGCGTAACCGCCGCTTCGACCGAGC
TGCTCGAAGAGATGGGCGTGCTGGAGCTGCTCCGTCAGCGGCCCGGTAGCCTGACGGAGTTCAGGGGCGCGACCTTTGTT
TCGCCCGGCGGTACGGTAGTGCAGGGCAGGATTTTGCGGAATGGCCATCTGAGCGGCAGCTCTTACGTCATTCCGAGAAT
GGTGCTTGACGACTCCCTCGTTTCTCGCGTCAAAGAGCACTCTTCGATCACTTTTCTCGATAAGACAACCGTCACCGGTC
TGGTCATGGATGGCGACCGGGCACGGGGTGTTGCTACCTCAGCCGGGGAGTTTTGCGGAAGAATCATCATCGCTGCTGAT
GGGGCCTATTCGCCGATAGCCAAACAGCTCGATTTGTGGAACCGCGACAAACGTCAGCAGGGATTCGCCATGCGGGCGTG
GTTTTCGGGGGTCGAAGGGCTGGGTGATTCAATCGAGCTGTGTTACGACAAGGCGATGCTTCCGGGCTATGGCTGGATCT
TTCCCGCCGGTGAGCAGCGAGCCAACGTCGGAGTGTTTCTTTTGCCGCGCTTCGCCGATCAGCGAAGCACGAAGCGCTTG
TTCAAGAGCTTCGTCAAGGAAAACGCATTTGCGGCGGCGAGGCTGAAGAATGCCGTCATGGAGCCAGGCTCGCTCAAAAG
CTGGCCGCTGCCGTTCGGCTCCTTCGCGGGCCGGCGGGGCCGGGGCAACGTGCTGCTCGCGGGCGATGCCGGAAGCTTCA
TCGATCCGCTGACGGGCGAAGGCATCTACTACGCGCTGAAAACCGGACGCTACGCCGCCGAAGCGGTCGCCAACGCGCTC
GAACGCAATGACGAATCTGCGGCGCTGACTCGCTACGAGCAGCTCTGGCGAGGCGAGTTTTCAGGCCGGGTCTATTTCCC
CGGTTACGCATTTCAGCATTTCATGAACAATTCCTGGTTTGTGGACACCTTCATGCGCTACACCGCCAAAAAACAACATC
GAGCCGATCTCCTCGCCGACGTCGTAGCCCACAACCGAAAACGCCGAGAACTGTTCAAACTGCTGAATCCGTTTTATTGA

Upstream 100 bases:

>100_bases
CTTGGCGGAGGAGTGAGCGGAGGCTGGTATTGATACGTGTTTTTTGGTACCCTGAATCGTATATTTTTTCTTTAGGCGGT
AACCTGAAGCCGATTGATCT

Downstream 100 bases:

>100_bases
AGAAGTGGGAGTCGTTGATTTGTTTGTTATGGCGAGGATGGCGGTGATGTGGCAATCCAAGCCCAAATACCCATGCCGGA
ACGGATATATTTGCCGATCA

Product: geranylgeranyl hydrogenase BchP, putative

Products: NA

Alternate protein names: DGGGPL reductase 2; 2,3-di-O-geranylgeranylglyceryl phosphate reductase 2; Geranylgeranyl reductase 2; GGR 2 [H]

Number of amino acids: Translated: 399; Mature: 399

Protein sequence:

>399_residues
MQRYDAVISGAGPAGCSAALSLAQKGRRVLLIDKARFPREKICGDGVTAASTELLEEMGVLELLRQRPGSLTEFRGATFV
SPGGTVVQGRILRNGHLSGSSYVIPRMVLDDSLVSRVKEHSSITFLDKTTVTGLVMDGDRARGVATSAGEFCGRIIIAAD
GAYSPIAKQLDLWNRDKRQQGFAMRAWFSGVEGLGDSIELCYDKAMLPGYGWIFPAGEQRANVGVFLLPRFADQRSTKRL
FKSFVKENAFAAARLKNAVMEPGSLKSWPLPFGSFAGRRGRGNVLLAGDAGSFIDPLTGEGIYYALKTGRYAAEAVANAL
ERNDESAALTRYEQLWRGEFSGRVYFPGYAFQHFMNNSWFVDTFMRYTAKKQHRADLLADVVAHNRKRRELFKLLNPFY

Sequences:

>Translated_399_residues
MQRYDAVISGAGPAGCSAALSLAQKGRRVLLIDKARFPREKICGDGVTAASTELLEEMGVLELLRQRPGSLTEFRGATFV
SPGGTVVQGRILRNGHLSGSSYVIPRMVLDDSLVSRVKEHSSITFLDKTTVTGLVMDGDRARGVATSAGEFCGRIIIAAD
GAYSPIAKQLDLWNRDKRQQGFAMRAWFSGVEGLGDSIELCYDKAMLPGYGWIFPAGEQRANVGVFLLPRFADQRSTKRL
FKSFVKENAFAAARLKNAVMEPGSLKSWPLPFGSFAGRRGRGNVLLAGDAGSFIDPLTGEGIYYALKTGRYAAEAVANAL
ERNDESAALTRYEQLWRGEFSGRVYFPGYAFQHFMNNSWFVDTFMRYTAKKQHRADLLADVVAHNRKRRELFKLLNPFY
>Mature_399_residues
MQRYDAVISGAGPAGCSAALSLAQKGRRVLLIDKARFPREKICGDGVTAASTELLEEMGVLELLRQRPGSLTEFRGATFV
SPGGTVVQGRILRNGHLSGSSYVIPRMVLDDSLVSRVKEHSSITFLDKTTVTGLVMDGDRARGVATSAGEFCGRIIIAAD
GAYSPIAKQLDLWNRDKRQQGFAMRAWFSGVEGLGDSIELCYDKAMLPGYGWIFPAGEQRANVGVFLLPRFADQRSTKRL
FKSFVKENAFAAARLKNAVMEPGSLKSWPLPFGSFAGRRGRGNVLLAGDAGSFIDPLTGEGIYYALKTGRYAAEAVANAL
ERNDESAALTRYEQLWRGEFSGRVYFPGYAFQHFMNNSWFVDTFMRYTAKKQHRADLLADVVAHNRKRRELFKLLNPFY

Specific function: Is involved in the reduction of 2,3- digeranylgeranylglycerophospholipids (unsaturated archaeols) into 2,3-diphytanylglycerophospholipids (saturated archaeols) in the biosynthesis of archaeal membrane lipids. Catalyzes the formation of archaetidic acid (2

COG id: COG0644

COG function: function code C; Dehydrogenases (flavoproteins)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the geranylgeranyl reductase family. DGGGPL reductase subfamily [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011777
- InterPro:   IPR002938
- InterPro:   IPR003042 [H]

Pfam domain/function: PF01494 FAD_binding_3 [H]

EC number: NA

Molecular weight: Translated: 44070; Mature: 44070

Theoretical pI: Translated: 10.06; Mature: 10.06

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQRYDAVISGAGPAGCSAALSLAQKGRRVLLIDKARFPREKICGDGVTAASTELLEEMGV
CCHHHCEEECCCCCHHHHHHHHHHCCCEEEEEECCCCCHHHHCCCCCCHHHHHHHHHHHH
LELLRQRPGSLTEFRGATFVSPGGTVVQGRILRNGHLSGSSYVIPRMVLDDSLVSRVKEH
HHHHHCCCCCCHHHCCCEEECCCCCEEEEEEEECCCCCCCCEECHHHHHHHHHHHHHHHC
SSITFLDKTTVTGLVMDGDRARGVATSAGEFCGRIIIAADGAYSPIAKQLDLWNRDKRQQ
CCEEEEECCEEEEEEECCCCCCCCCCCHHHHHCEEEEEECCCCCHHHHHHHHCCCCHHHC
GFAMRAWFSGVEGLGDSIELCYDKAMLPGYGWIFPAGEQRANVGVFLLPRFADQRSTKRL
CCHHHHHHHHHHCCCCHHHHHHHHHCCCCCCEEECCCCCCCCCCEEEECCHHCHHHHHHH
FKSFVKENAFAAARLKNAVMEPGSLKSWPLPFGSFAGRRGRGNVLLAGDAGSFIDPLTGE
HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHCCCCCCCCEEEECCCCCCCCCCCCC
GIYYALKTGRYAAEAVANALERNDESAALTRYEQLWRGEFSGRVYFPGYAFQHFMNNSWF
CEEEEEECCCHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCEEECCCHHHHHHCCCCHH
VDTFMRYTAKKQHRADLLADVVAHNRKRRELFKLLNPFY
HHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCC
>Mature Secondary Structure
MQRYDAVISGAGPAGCSAALSLAQKGRRVLLIDKARFPREKICGDGVTAASTELLEEMGV
CCHHHCEEECCCCCHHHHHHHHHHCCCEEEEEECCCCCHHHHCCCCCCHHHHHHHHHHHH
LELLRQRPGSLTEFRGATFVSPGGTVVQGRILRNGHLSGSSYVIPRMVLDDSLVSRVKEH
HHHHHCCCCCCHHHCCCEEECCCCCEEEEEEEECCCCCCCCEECHHHHHHHHHHHHHHHC
SSITFLDKTTVTGLVMDGDRARGVATSAGEFCGRIIIAADGAYSPIAKQLDLWNRDKRQQ
CCEEEEECCEEEEEEECCCCCCCCCCCHHHHHCEEEEEECCCCCHHHHHHHHCCCCHHHC
GFAMRAWFSGVEGLGDSIELCYDKAMLPGYGWIFPAGEQRANVGVFLLPRFADQRSTKRL
CCHHHHHHHHHHCCCCHHHHHHHHHCCCCCCEEECCCCCCCCCCEEEECCHHCHHHHHHH
FKSFVKENAFAAARLKNAVMEPGSLKSWPLPFGSFAGRRGRGNVLLAGDAGSFIDPLTGE
HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHCCCCCCCCEEEECCCCCCCCCCCCC
GIYYALKTGRYAAEAVANALERNDESAALTRYEQLWRGEFSGRVYFPGYAFQHFMNNSWF
CEEEEEECCCHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCEEECCCHHHHHHCCCCHH
VDTFMRYTAKKQHRADLLADVVAHNRKRRELFKLLNPFY
HHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11930014 [H]