| Definition | Chlorobium tepidum TLS, complete genome. |
|---|---|
| Accession | NC_002932 |
| Length | 2,154,946 |
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The map label for this gene is 21674056
Identifier: 21674056
GI number: 21674056
Start: 1156549
End: 1157748
Strand: Reverse
Name: 21674056
Synonym: CT1232
Alternate gene names: NA
Gene position: 1157748-1156549 (Counterclockwise)
Preceding gene: 21674057
Following gene: 21674054
Centisome position: 53.73
GC content: 59.83
Gene sequence:
>1200_bases ATGCAGCGTTACGATGCAGTGATTTCGGGAGCCGGGCCGGCGGGATGCTCGGCGGCGCTCTCTCTCGCACAAAAGGGCCG TCGCGTGTTGCTCATCGACAAGGCGCGGTTTCCGAGAGAGAAGATTTGCGGCGACGGCGTAACCGCCGCTTCGACCGAGC TGCTCGAAGAGATGGGCGTGCTGGAGCTGCTCCGTCAGCGGCCCGGTAGCCTGACGGAGTTCAGGGGCGCGACCTTTGTT TCGCCCGGCGGTACGGTAGTGCAGGGCAGGATTTTGCGGAATGGCCATCTGAGCGGCAGCTCTTACGTCATTCCGAGAAT GGTGCTTGACGACTCCCTCGTTTCTCGCGTCAAAGAGCACTCTTCGATCACTTTTCTCGATAAGACAACCGTCACCGGTC TGGTCATGGATGGCGACCGGGCACGGGGTGTTGCTACCTCAGCCGGGGAGTTTTGCGGAAGAATCATCATCGCTGCTGAT GGGGCCTATTCGCCGATAGCCAAACAGCTCGATTTGTGGAACCGCGACAAACGTCAGCAGGGATTCGCCATGCGGGCGTG GTTTTCGGGGGTCGAAGGGCTGGGTGATTCAATCGAGCTGTGTTACGACAAGGCGATGCTTCCGGGCTATGGCTGGATCT TTCCCGCCGGTGAGCAGCGAGCCAACGTCGGAGTGTTTCTTTTGCCGCGCTTCGCCGATCAGCGAAGCACGAAGCGCTTG TTCAAGAGCTTCGTCAAGGAAAACGCATTTGCGGCGGCGAGGCTGAAGAATGCCGTCATGGAGCCAGGCTCGCTCAAAAG CTGGCCGCTGCCGTTCGGCTCCTTCGCGGGCCGGCGGGGCCGGGGCAACGTGCTGCTCGCGGGCGATGCCGGAAGCTTCA TCGATCCGCTGACGGGCGAAGGCATCTACTACGCGCTGAAAACCGGACGCTACGCCGCCGAAGCGGTCGCCAACGCGCTC GAACGCAATGACGAATCTGCGGCGCTGACTCGCTACGAGCAGCTCTGGCGAGGCGAGTTTTCAGGCCGGGTCTATTTCCC CGGTTACGCATTTCAGCATTTCATGAACAATTCCTGGTTTGTGGACACCTTCATGCGCTACACCGCCAAAAAACAACATC GAGCCGATCTCCTCGCCGACGTCGTAGCCCACAACCGAAAACGCCGAGAACTGTTCAAACTGCTGAATCCGTTTTATTGA
Upstream 100 bases:
>100_bases CTTGGCGGAGGAGTGAGCGGAGGCTGGTATTGATACGTGTTTTTTGGTACCCTGAATCGTATATTTTTTCTTTAGGCGGT AACCTGAAGCCGATTGATCT
Downstream 100 bases:
>100_bases AGAAGTGGGAGTCGTTGATTTGTTTGTTATGGCGAGGATGGCGGTGATGTGGCAATCCAAGCCCAAATACCCATGCCGGA ACGGATATATTTGCCGATCA
Product: geranylgeranyl hydrogenase BchP, putative
Products: NA
Alternate protein names: DGGGPL reductase 2; 2,3-di-O-geranylgeranylglyceryl phosphate reductase 2; Geranylgeranyl reductase 2; GGR 2 [H]
Number of amino acids: Translated: 399; Mature: 399
Protein sequence:
>399_residues MQRYDAVISGAGPAGCSAALSLAQKGRRVLLIDKARFPREKICGDGVTAASTELLEEMGVLELLRQRPGSLTEFRGATFV SPGGTVVQGRILRNGHLSGSSYVIPRMVLDDSLVSRVKEHSSITFLDKTTVTGLVMDGDRARGVATSAGEFCGRIIIAAD GAYSPIAKQLDLWNRDKRQQGFAMRAWFSGVEGLGDSIELCYDKAMLPGYGWIFPAGEQRANVGVFLLPRFADQRSTKRL FKSFVKENAFAAARLKNAVMEPGSLKSWPLPFGSFAGRRGRGNVLLAGDAGSFIDPLTGEGIYYALKTGRYAAEAVANAL ERNDESAALTRYEQLWRGEFSGRVYFPGYAFQHFMNNSWFVDTFMRYTAKKQHRADLLADVVAHNRKRRELFKLLNPFY
Sequences:
>Translated_399_residues MQRYDAVISGAGPAGCSAALSLAQKGRRVLLIDKARFPREKICGDGVTAASTELLEEMGVLELLRQRPGSLTEFRGATFV SPGGTVVQGRILRNGHLSGSSYVIPRMVLDDSLVSRVKEHSSITFLDKTTVTGLVMDGDRARGVATSAGEFCGRIIIAAD GAYSPIAKQLDLWNRDKRQQGFAMRAWFSGVEGLGDSIELCYDKAMLPGYGWIFPAGEQRANVGVFLLPRFADQRSTKRL FKSFVKENAFAAARLKNAVMEPGSLKSWPLPFGSFAGRRGRGNVLLAGDAGSFIDPLTGEGIYYALKTGRYAAEAVANAL ERNDESAALTRYEQLWRGEFSGRVYFPGYAFQHFMNNSWFVDTFMRYTAKKQHRADLLADVVAHNRKRRELFKLLNPFY >Mature_399_residues MQRYDAVISGAGPAGCSAALSLAQKGRRVLLIDKARFPREKICGDGVTAASTELLEEMGVLELLRQRPGSLTEFRGATFV SPGGTVVQGRILRNGHLSGSSYVIPRMVLDDSLVSRVKEHSSITFLDKTTVTGLVMDGDRARGVATSAGEFCGRIIIAAD GAYSPIAKQLDLWNRDKRQQGFAMRAWFSGVEGLGDSIELCYDKAMLPGYGWIFPAGEQRANVGVFLLPRFADQRSTKRL FKSFVKENAFAAARLKNAVMEPGSLKSWPLPFGSFAGRRGRGNVLLAGDAGSFIDPLTGEGIYYALKTGRYAAEAVANAL ERNDESAALTRYEQLWRGEFSGRVYFPGYAFQHFMNNSWFVDTFMRYTAKKQHRADLLADVVAHNRKRRELFKLLNPFY
Specific function: Is involved in the reduction of 2,3- digeranylgeranylglycerophospholipids (unsaturated archaeols) into 2,3-diphytanylglycerophospholipids (saturated archaeols) in the biosynthesis of archaeal membrane lipids. Catalyzes the formation of archaetidic acid (2
COG id: COG0644
COG function: function code C; Dehydrogenases (flavoproteins)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the geranylgeranyl reductase family. DGGGPL reductase subfamily [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011777 - InterPro: IPR002938 - InterPro: IPR003042 [H]
Pfam domain/function: PF01494 FAD_binding_3 [H]
EC number: NA
Molecular weight: Translated: 44070; Mature: 44070
Theoretical pI: Translated: 10.06; Mature: 10.06
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQRYDAVISGAGPAGCSAALSLAQKGRRVLLIDKARFPREKICGDGVTAASTELLEEMGV CCHHHCEEECCCCCHHHHHHHHHHCCCEEEEEECCCCCHHHHCCCCCCHHHHHHHHHHHH LELLRQRPGSLTEFRGATFVSPGGTVVQGRILRNGHLSGSSYVIPRMVLDDSLVSRVKEH HHHHHCCCCCCHHHCCCEEECCCCCEEEEEEEECCCCCCCCEECHHHHHHHHHHHHHHHC SSITFLDKTTVTGLVMDGDRARGVATSAGEFCGRIIIAADGAYSPIAKQLDLWNRDKRQQ CCEEEEECCEEEEEEECCCCCCCCCCCHHHHHCEEEEEECCCCCHHHHHHHHCCCCHHHC GFAMRAWFSGVEGLGDSIELCYDKAMLPGYGWIFPAGEQRANVGVFLLPRFADQRSTKRL CCHHHHHHHHHHCCCCHHHHHHHHHCCCCCCEEECCCCCCCCCCEEEECCHHCHHHHHHH FKSFVKENAFAAARLKNAVMEPGSLKSWPLPFGSFAGRRGRGNVLLAGDAGSFIDPLTGE HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHCCCCCCCCEEEECCCCCCCCCCCCC GIYYALKTGRYAAEAVANALERNDESAALTRYEQLWRGEFSGRVYFPGYAFQHFMNNSWF CEEEEEECCCHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCEEECCCHHHHHHCCCCHH VDTFMRYTAKKQHRADLLADVVAHNRKRRELFKLLNPFY HHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCC >Mature Secondary Structure MQRYDAVISGAGPAGCSAALSLAQKGRRVLLIDKARFPREKICGDGVTAASTELLEEMGV CCHHHCEEECCCCCHHHHHHHHHHCCCEEEEEECCCCCHHHHCCCCCCHHHHHHHHHHHH LELLRQRPGSLTEFRGATFVSPGGTVVQGRILRNGHLSGSSYVIPRMVLDDSLVSRVKEH HHHHHCCCCCCHHHCCCEEECCCCCEEEEEEEECCCCCCCCEECHHHHHHHHHHHHHHHC SSITFLDKTTVTGLVMDGDRARGVATSAGEFCGRIIIAADGAYSPIAKQLDLWNRDKRQQ CCEEEEECCEEEEEEECCCCCCCCCCCHHHHHCEEEEEECCCCCHHHHHHHHCCCCHHHC GFAMRAWFSGVEGLGDSIELCYDKAMLPGYGWIFPAGEQRANVGVFLLPRFADQRSTKRL CCHHHHHHHHHHCCCCHHHHHHHHHCCCCCCEEECCCCCCCCCCEEEECCHHCHHHHHHH FKSFVKENAFAAARLKNAVMEPGSLKSWPLPFGSFAGRRGRGNVLLAGDAGSFIDPLTGE HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHCCCCCCCCEEEECCCCCCCCCCCCC GIYYALKTGRYAAEAVANALERNDESAALTRYEQLWRGEFSGRVYFPGYAFQHFMNNSWF CEEEEEECCCHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCEEECCCHHHHHHCCCCHH VDTFMRYTAKKQHRADLLADVVAHNRKRRELFKLLNPFY HHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 11930014 [H]