| Definition | Chlorobium tepidum TLS, complete genome. |
|---|---|
| Accession | NC_002932 |
| Length | 2,154,946 |
Click here to switch to the map view.
The map label for this gene is 21674037
Identifier: 21674037
GI number: 21674037
Start: 1137659
End: 1138567
Strand: Reverse
Name: 21674037
Synonym: CT1212
Alternate gene names: NA
Gene position: 1138567-1137659 (Counterclockwise)
Preceding gene: 21674039
Following gene: 21674035
Centisome position: 52.84
GC content: 53.8
Gene sequence:
>909_bases ATGATGTTAACGTCTGACAGAGGAGTAATGATGAATAATGGAGTGCTGTGGATAAAACCAGTGATGAAATGGATGGGCCT GACCGCCTTTCTGGTCATAGCCGGATGCTCGCAATTCAAGACCGTAACCAGAGAGCCTGGCGTGCTCGGTGACAGGGTGG CGTTGACACCGGAAATGACGGGGCTGTATGAGGAGGTGGCATCGAATGCCAGCACCGTCAGGGCGCTGGATGGATATGCA GATCTCTACCTGGAAACACCGAAGCGCAAAGCGAAGGCTTACTGTACGGTTCAGATACAGAAATCGAGGGATGCCCGCAT GATCGTTACTGCCGGTATTCTCGGATGGCCGGTGGCCGATCTTCTGATTCGTCCCGACTCGCTCTTCGTGAATGACATGC TGAACAACCGGATGCTTGTGGGACGCAACAACGGCGAAAATATGGGCAAGATCATCGGGGTTAACGCCGGGTTTGGCAGG ATGATCGAAACACTGTTCGGTATTGCCGATGTGCCTGAGCCGGCCAAAAACATCGAATCGGTCAGGAAGGGAAGCGGTCG GGTCAGCTTCACCGTGAAGTCCGGCAACGGCACGAAAGAGCTGGTGGTCGATCCGCTGACCAGAGAGCTTACCGGACTTG TCTATTTCGATCAGTCAGGTCGCAAAAGTGTCGAATTCCGGTTCGCCGCCTATCAGTCTCAGGTGGACAAGAACGGCGCG GAGTTGAGGGTGCCGAGAGAGATCGACATGATCCTCTATCGAGAAGATGATCCGGAAGGGTCACGCAGTCTGAAGGTGGT TTATGATGAACGGGTCATCAATCCGCCCGATTTTAACATCACATTTAAATGGCCAGCCAGGGCGAAGACGGTCAATCTCG ACGAAGTGGAGCGGTTGCCGTGGCTTTAA
Upstream 100 bases:
>100_bases TTTTGACAGAGAAATGATTTAATTAAAATAACATTTCGGAGCTATCAACCTTGACCGGGATTCAGATTCAACGGGAAGAG TGGTTCGGATGGATTGAGCT
Downstream 100 bases:
>100_bases AAAGGCTTATGAATTGAATGCGGGGAGAACAGTTCATTATTCGATCCATAGCTTCCATCAGCATTTGACGAAAAACAAGA AAGGCCCCGGAAAACGGAGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 302; Mature: 302
Protein sequence:
>302_residues MMLTSDRGVMMNNGVLWIKPVMKWMGLTAFLVIAGCSQFKTVTREPGVLGDRVALTPEMTGLYEEVASNASTVRALDGYA DLYLETPKRKAKAYCTVQIQKSRDARMIVTAGILGWPVADLLIRPDSLFVNDMLNNRMLVGRNNGENMGKIIGVNAGFGR MIETLFGIADVPEPAKNIESVRKGSGRVSFTVKSGNGTKELVVDPLTRELTGLVYFDQSGRKSVEFRFAAYQSQVDKNGA ELRVPREIDMILYREDDPEGSRSLKVVYDERVINPPDFNITFKWPARAKTVNLDEVERLPWL
Sequences:
>Translated_302_residues MMLTSDRGVMMNNGVLWIKPVMKWMGLTAFLVIAGCSQFKTVTREPGVLGDRVALTPEMTGLYEEVASNASTVRALDGYA DLYLETPKRKAKAYCTVQIQKSRDARMIVTAGILGWPVADLLIRPDSLFVNDMLNNRMLVGRNNGENMGKIIGVNAGFGR MIETLFGIADVPEPAKNIESVRKGSGRVSFTVKSGNGTKELVVDPLTRELTGLVYFDQSGRKSVEFRFAAYQSQVDKNGA ELRVPREIDMILYREDDPEGSRSLKVVYDERVINPPDFNITFKWPARAKTVNLDEVERLPWL >Mature_302_residues MMLTSDRGVMMNNGVLWIKPVMKWMGLTAFLVIAGCSQFKTVTREPGVLGDRVALTPEMTGLYEEVASNASTVRALDGYA DLYLETPKRKAKAYCTVQIQKSRDARMIVTAGILGWPVADLLIRPDSLFVNDMLNNRMLVGRNNGENMGKIIGVNAGFGR MIETLFGIADVPEPAKNIESVRKGSGRVSFTVKSGNGTKELVVDPLTRELTGLVYFDQSGRKSVEFRFAAYQSQVDKNGA ELRVPREIDMILYREDDPEGSRSLKVVYDERVINPPDFNITFKWPARAKTVNLDEVERLPWL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 33732; Mature: 33732
Theoretical pI: Translated: 8.97; Mature: 8.97
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 4.3 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 4.3 %Met (Mature Protein) 5.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMLTSDRGVMMNNGVLWIKPVMKWMGLTAFLVIAGCSQFKTVTREPGVLGDRVALTPEMT CEEECCCCEEEECCEEEHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCCCCEEEECCHHH GLYEEVASNASTVRALDGYADLYLETPKRKAKAYCTVQIQKSRDARMIVTAGILGWPVAD HHHHHHHCCCHHEEECCCCEEEEEECCCCCCCEEEEEEEECCCCCEEEEEECCHHCCHHH LLIRPDSLFVNDMLNNRMLVGRNNGENMGKIIGVNAGFGRMIETLFGIADVPEPAKNIES HEECCCHHHHHHHHCCCEEEECCCCCCCCEEEEECCCHHHHHHHHHCCCCCCCHHHHHHH VRKGSGRVSFTVKSGNGTKELVVDPLTRELTGLVYFDQSGRKSVEFRFAAYQSQVDKNGA HHCCCCEEEEEEECCCCCCEEEECCHHHHHEEEEEECCCCCCEEEEEEEHHHHHHCCCCC ELRVPREIDMILYREDDPEGSRSLKVVYDERVINPPDFNITFKWPARAKTVNLDEVERLP EEECCCEEEEEEEECCCCCCCCEEEEEEECCCCCCCCCEEEEECCCCCEEECHHHHHCCC WL CC >Mature Secondary Structure MMLTSDRGVMMNNGVLWIKPVMKWMGLTAFLVIAGCSQFKTVTREPGVLGDRVALTPEMT CEEECCCCEEEECCEEEHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCCCCEEEECCHHH GLYEEVASNASTVRALDGYADLYLETPKRKAKAYCTVQIQKSRDARMIVTAGILGWPVAD HHHHHHHCCCHHEEECCCCEEEEEECCCCCCCEEEEEEEECCCCCEEEEEECCHHCCHHH LLIRPDSLFVNDMLNNRMLVGRNNGENMGKIIGVNAGFGRMIETLFGIADVPEPAKNIES HEECCCHHHHHHHHCCCEEEECCCCCCCCEEEEECCCHHHHHHHHHCCCCCCCHHHHHHH VRKGSGRVSFTVKSGNGTKELVVDPLTRELTGLVYFDQSGRKSVEFRFAAYQSQVDKNGA HHCCCCEEEEEEECCCCCCEEEECCHHHHHEEEEEECCCCCCEEEEEEEHHHHHHCCCCC ELRVPREIDMILYREDDPEGSRSLKVVYDERVINPPDFNITFKWPARAKTVNLDEVERLP EEECCCEEEEEEEECCCCCCCCEEEEEEECCCCCCCCCEEEEECCCCCEEECHHHHHCCC WL CC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA