| Definition | Chlorobium tepidum TLS, complete genome. |
|---|---|
| Accession | NC_002932 |
| Length | 2,154,946 |
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The map label for this gene is tatC [C]
Identifier: 21674032
GI number: 21674032
Start: 1133991
End: 1134728
Strand: Direct
Name: tatC [C]
Synonym: CT1207
Alternate gene names: 21674032
Gene position: 1133991-1134728 (Clockwise)
Preceding gene: 21674028
Following gene: 21674033
Centisome position: 52.62
GC content: 50.41
Gene sequence:
>738_bases ATGAGCTTCCTTGATCATCTCGAAGAGCTTCGCTGGAGGCTCATCTGGTCTCTTATCGCATTTGTTGTAGCGGCCATCGT TACCGCATTCTTTTCAGACTTTCTCGTCAACCAGGTACTCATCAGACCACTAAAAGAGAGTGGCCCGAACATTCATTTGC AGAACCTTGTGCCCTACGGCCAGATTTCGCTCTACCTGCAAGTGATTGTTTTTGCGGCATTTGTGCTCGCGTTCCCCTTT CTGGTCTGGCAGATATGGCAATTCGTCGAACCTGGCTTGCATGAAACCGAAAAAGCAGCCAGCCGTTTTATCATTTTCTT CATTTCGATCTGCTTCTTCTCGGGCATCGCTTTCGGTTACTTTGTCTTCCTGCCAATCTCACTGAAATTCTTTGCGGGAT TCGGCTCCGAACTCATCGCCAACAACATCGCCATCCAGGACTACATCAGTTTCTTCATGGGCACCCTGCTGACAACCGGT CTGGTTTTCGAGCTGCCCTTCGTATCTTATGTGCTCTCGAAAATCGGTTTGCTAACCCCGGCCTTCATGCGCTTTTACCG TCGCCATGCGGTCGTAGCGCTGCTGATCATCGCCGCCATCGTCACGCCGTCAACCGATATGGTCACACAGGCAGTCATCG CCATTCCGATGATCGTGCTGTACGAAATCAGCATCTACATTTCAGCCGCTGTACAGAAAAAGCGCAACAAGAAGATGATG GAGGAGGGCGTTGCATGA
Upstream 100 bases:
>100_bases CAAGGCGCTGGAAAAAGCCCCTGGCGAAATAGCAGATTCAGCCCCCCAGGTTAAAACAGAAACGGCAGAGCCGGAAGGGG AGGCCGAACCGGAAGACGGC
Downstream 100 bases:
>100_bases TCTGCGACGATGCCCGCCCGAACGTCGTGTTCGAAGCCATCGAAAGTTCATTGCTGAAAGGCAATCCGCTCGGCGATCCG GCCACGCGCCACGTGCCGGT
Product: Sec-independent protein translocase protein TatC, putative
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 245; Mature: 244
Protein sequence:
>245_residues MSFLDHLEELRWRLIWSLIAFVVAAIVTAFFSDFLVNQVLIRPLKESGPNIHLQNLVPYGQISLYLQVIVFAAFVLAFPF LVWQIWQFVEPGLHETEKAASRFIIFFISICFFSGIAFGYFVFLPISLKFFAGFGSELIANNIAIQDYISFFMGTLLTTG LVFELPFVSYVLSKIGLLTPAFMRFYRRHAVVALLIIAAIVTPSTDMVTQAVIAIPMIVLYEISIYISAAVQKKRNKKMM EEGVA
Sequences:
>Translated_245_residues MSFLDHLEELRWRLIWSLIAFVVAAIVTAFFSDFLVNQVLIRPLKESGPNIHLQNLVPYGQISLYLQVIVFAAFVLAFPF LVWQIWQFVEPGLHETEKAASRFIIFFISICFFSGIAFGYFVFLPISLKFFAGFGSELIANNIAIQDYISFFMGTLLTTG LVFELPFVSYVLSKIGLLTPAFMRFYRRHAVVALLIIAAIVTPSTDMVTQAVIAIPMIVLYEISIYISAAVQKKRNKKMM EEGVA >Mature_244_residues SFLDHLEELRWRLIWSLIAFVVAAIVTAFFSDFLVNQVLIRPLKESGPNIHLQNLVPYGQISLYLQVIVFAAFVLAFPFL VWQIWQFVEPGLHETEKAASRFIIFFISICFFSGIAFGYFVFLPISLKFFAGFGSELIANNIAIQDYISFFMGTLLTTGL VFELPFVSYVLSKIGLLTPAFMRFYRRHAVVALLIIAAIVTPSTDMVTQAVIAIPMIVLYEISIYISAAVQKKRNKKMME EGVA
Specific function: Required For Correct Localization Of Precursor Proteins Bearing Signal Peptides With The Twin Arginine Conserved Motif S/T-R-R-X-F-L-K. This Sec-Independent Pathway Is Termed Tat For Twin-Arginine Translocation System. This System Mainly Transports Protei
COG id: COG0805
COG function: function code U; Sec-independent protein secretion pathway component TatC
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the tatC family [H]
Homologues:
Organism=Escherichia coli, GI2367313, Length=247, Percent_Identity=29.5546558704453, Blast_Score=108, Evalue=3e-25,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002033 - InterPro: IPR019820 - InterPro: IPR019822 [H]
Pfam domain/function: PF00902 TatC [H]
EC number: NA
Molecular weight: Translated: 27759; Mature: 27628
Theoretical pI: Translated: 8.42; Mature: 8.42
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSFLDHLEELRWRLIWSLIAFVVAAIVTAFFSDFLVNQVLIRPLKESGPNIHLQNLVPYG CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEHHHCCCHH QISLYLQVIVFAAFVLAFPFLVWQIWQFVEPGLHETEKAASRFIIFFISICFFSGIAFGY HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH FVFLPISLKFFAGFGSELIANNIAIQDYISFFMGTLLTTGLVFELPFVSYVLSKIGLLTP HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AFMRFYRRHAVVALLIIAAIVTPSTDMVTQAVIAIPMIVLYEISIYISAAVQKKRNKKMM HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH EEGVA HHCCC >Mature Secondary Structure SFLDHLEELRWRLIWSLIAFVVAAIVTAFFSDFLVNQVLIRPLKESGPNIHLQNLVPYG CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEHHHCCCHH QISLYLQVIVFAAFVLAFPFLVWQIWQFVEPGLHETEKAASRFIIFFISICFFSGIAFGY HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH FVFLPISLKFFAGFGSELIANNIAIQDYISFFMGTLLTTGLVFELPFVSYVLSKIGLLTP HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AFMRFYRRHAVVALLIIAAIVTPSTDMVTQAVIAIPMIVLYEISIYISAAVQKKRNKKMM HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH EEGVA HHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9537320 [H]