| Definition | Chlorobium tepidum TLS, complete genome. |
|---|---|
| Accession | NC_002932 |
| Length | 2,154,946 |
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The map label for this gene is 21674024
Identifier: 21674024
GI number: 21674024
Start: 1127331
End: 1128446
Strand: Reverse
Name: 21674024
Synonym: CT1198
Alternate gene names: NA
Gene position: 1128446-1127331 (Counterclockwise)
Preceding gene: 21674026
Following gene: 21674020
Centisome position: 52.37
GC content: 59.86
Gene sequence:
>1116_bases GTGCATACCGATCTCTTTCTCGAAGCCCGACTCGTGATCGCGTCCCCGCCAGACCTCCGTTTCGCTGAATTCGTGGCGGA TCGCGCCTTTGTAGAGGCAACCGATTCGAGTCGAAAGAGCGACAATCTCTTCGAGTTCCGACGAAATGAGCAGGATCGCC AGACCGCTTTTGCGAGCGTCGATGATGCGCTTGTGAATCTGCTCGATAGCGCCGATATCGACGCCGCGCGTTGGCTGCGC CAGCACAAGCAGCTTCAGTTGGGGGCGTTCCATTTCACGCGCCACCACGATCTTCTGCTGGTTACCGCCAGAGAGAGAGG CGATGGGCGGATTGGTTCCCGCCGCACACCGGATGTCGTATTGCTCGATCATGGCCGTAGCATTTTTGTGAACGGCGTCA CGATCAAATCCGATGCCGCGATGGAATGCTTTTTCGCGATGCCTGCCGAGGATCAGGTTTTCCTCGATGCCATATTCAGC GATGATCGCCGATTTGTGCCGGTCTTCGGGTATCATCGAAACGCCGAGTGCAGCGATTTCCGACGGATTCTTGCCAAGCG TCTCCTGGGCGTCGATGGTGATCGATCCGCCGGTTTTGCCGCTGCGATCGAACGTTCCCCACAACAACGAGAGCAGCTCG CTCTGGCCGTTGCCCTCCACTCCGGCGATGCCGTAGATTTCTCCTGCTCTCACGTGCAGCGTCAGGCCGGTGAGTTTGTC GATGCCAAGCGGCGAGCGGTAGGTCAGCTTGTCGATCGAGAGCACTGTTTTACCCGGAGTCTGCGGCGCATTGGCGGTTC TGAGCAGAACATCGCGCCCGACCATCATTCTCGCCAAATCCTCCTTGCTGGTCGATGTGGTCGGCACGGTGCCGACCAGC GACCCTTTGCGCATGACGCTCACCGAGTCCGAGACGGTGAGTACTTCGTCGAGCTTGTGGGTGATGAGCAGGACGGTACG CCCTTCGGCGGCGAGCGAGCGCAGCGTGGCAAAGAGTCGCGCGGTTTCGGGCGGCGAGAGCACGGCGGTCGGCTCGTCGA GAATCAGGAGCTTGGCACGTCGGTAGAGCAGCTTGAGAATTTCCACGCGCTGCTGTTCGCCGACCGACAGGGTTGA
Upstream 100 bases:
>100_bases TGATAAGGCTTCCCGCCAGAAGGGCGAACAGAAGCGAAAGTGCCGGAATGAAAGGTTTGACGCTGCGTTTCGACATCGAA AAAATGAGGTTTCAGGTGAT
Downstream 100 bases:
>100_bases AACCAGTGCGTCCGGATCGACTTCGAGTCCGTGCTGCTGGCTGAGCTGGCGAATTTCCTTGCCGATGCGCCGGGTTGGCA GTGCTAGGCGGCTCTCCTCC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 371; Mature: 371
Protein sequence:
>371_residues MHTDLFLEARLVIASPPDLRFAEFVADRAFVEATDSSRKSDNLFEFRRNEQDRQTAFASVDDALVNLLDSADIDAARWLR QHKQLQLGAFHFTRHHDLLLVTARERGDGRIGSRRTPDVVLLDHGRSIFVNGVTIKSDAAMECFFAMPAEDQVFLDAIFS DDRRFVPVFGYHRNAECSDFRRILAKRLLGVDGDRSAGFAAAIERSPQQREQLALAVALHSGDAVDFSCSHVQRQAGEFV DAKRRAVGQLVDREHCFTRSLRRIGGSEQNIAPDHHSRQILLAGRCGRHGADQRPFAHDAHRVRDGEYFVELVGDEQDGT PFGGERAQRGKESRGFGRREHGGRLVENQELGTSVEQLENFHALLFADRQG
Sequences:
>Translated_371_residues MHTDLFLEARLVIASPPDLRFAEFVADRAFVEATDSSRKSDNLFEFRRNEQDRQTAFASVDDALVNLLDSADIDAARWLR QHKQLQLGAFHFTRHHDLLLVTARERGDGRIGSRRTPDVVLLDHGRSIFVNGVTIKSDAAMECFFAMPAEDQVFLDAIFS DDRRFVPVFGYHRNAECSDFRRILAKRLLGVDGDRSAGFAAAIERSPQQREQLALAVALHSGDAVDFSCSHVQRQAGEFV DAKRRAVGQLVDREHCFTRSLRRIGGSEQNIAPDHHSRQILLAGRCGRHGADQRPFAHDAHRVRDGEYFVELVGDEQDGT PFGGERAQRGKESRGFGRREHGGRLVENQELGTSVEQLENFHALLFADRQG >Mature_371_residues MHTDLFLEARLVIASPPDLRFAEFVADRAFVEATDSSRKSDNLFEFRRNEQDRQTAFASVDDALVNLLDSADIDAARWLR QHKQLQLGAFHFTRHHDLLLVTARERGDGRIGSRRTPDVVLLDHGRSIFVNGVTIKSDAAMECFFAMPAEDQVFLDAIFS DDRRFVPVFGYHRNAECSDFRRILAKRLLGVDGDRSAGFAAAIERSPQQREQLALAVALHSGDAVDFSCSHVQRQAGEFV DAKRRAVGQLVDREHCFTRSLRRIGGSEQNIAPDHHSRQILLAGRCGRHGADQRPFAHDAHRVRDGEYFVELVGDEQDGT PFGGERAQRGKESRGFGRREHGGRLVENQELGTSVEQLENFHALLFADRQG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 41756; Mature: 41756
Theoretical pI: Translated: 6.66; Mature: 6.66
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHTDLFLEARLVIASPPDLRFAEFVADRAFVEATDSSRKSDNLFEFRRNEQDRQTAFASV CCCCEEEEEEEEEECCCCCHHHHHHHHHHHEECCCCCCCCCCHHHHHCCCHHHHHHHHHH DDALVNLLDSADIDAARWLRQHKQLQLGAFHFTRHHDLLLVTARERGDGRIGSRRTPDVV HHHHHHHHCCCCCHHHHHHHHHHHCCCEEEEEECCCCEEEEEECCCCCCCCCCCCCCCEE LLDHGRSIFVNGVTIKSDAAMECFFAMPAEDQVFLDAIFSDDRRFVPVFGYHRNAECSDF EEECCCEEEEEEEEEECCCCEEEEEECCCCCCEEEEEECCCCCEEEEEECCCCCCCHHHH RRILAKRLLGVDGDRSAGFAAAIERSPQQREQLALAVALHSGDAVDFSCSHVQRQAGEFV HHHHHHHHHCCCCCCCCCHHHHHHCCHHHHHHEEEEEEEECCCCCCCHHHHHHHHHHHHH DAKRRAVGQLVDREHCFTRSLRRIGGSEQNIAPDHHSRQILLAGRCGRHGADQRPFAHDA HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCHHH HRVRDGEYFVELVGDEQDGTPFGGERAQRGKESRGFGRREHGGRLVENQELGTSVEQLEN HHCCCCCEEEEEECCCCCCCCCCCHHHHCCCHHCCCCCHHCCCEEEECHHHCCHHHHHHC FHALLFADRQG CEEEEEEECCC >Mature Secondary Structure MHTDLFLEARLVIASPPDLRFAEFVADRAFVEATDSSRKSDNLFEFRRNEQDRQTAFASV CCCCEEEEEEEEEECCCCCHHHHHHHHHHHEECCCCCCCCCCHHHHHCCCHHHHHHHHHH DDALVNLLDSADIDAARWLRQHKQLQLGAFHFTRHHDLLLVTARERGDGRIGSRRTPDVV HHHHHHHHCCCCCHHHHHHHHHHHCCCEEEEEECCCCEEEEEECCCCCCCCCCCCCCCEE LLDHGRSIFVNGVTIKSDAAMECFFAMPAEDQVFLDAIFSDDRRFVPVFGYHRNAECSDF EEECCCEEEEEEEEEECCCCEEEEEECCCCCCEEEEEECCCCCEEEEEECCCCCCCHHHH RRILAKRLLGVDGDRSAGFAAAIERSPQQREQLALAVALHSGDAVDFSCSHVQRQAGEFV HHHHHHHHHCCCCCCCCCHHHHHHCCHHHHHHEEEEEEEECCCCCCCHHHHHHHHHHHHH DAKRRAVGQLVDREHCFTRSLRRIGGSEQNIAPDHHSRQILLAGRCGRHGADQRPFAHDA HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCHHH HRVRDGEYFVELVGDEQDGTPFGGERAQRGKESRGFGRREHGGRLVENQELGTSVEQLEN HHCCCCCEEEEEECCCCCCCCCCCHHHHCCCHHCCCCCHHCCCEEEECHHHCCHHHHHHC FHALLFADRQG CEEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA